RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 CCDC65Q8IXS2 484 aa23.32■■□□□ 1.32
PDXDC1-205ENST00000535621 DNERQ8NFT8 737 aa23.32■■□□□ 1.32
PDXDC1-205ENST00000535621 NEK9Q8TD19 979 aa23.32■■□□□ 1.32
PDXDC1-205ENST00000535621 LXNQ9BS40 222 aa23.32■■□□□ 1.32
PDXDC1-205ENST00000535621 A0A1B0GTH6 734 aa23.32■■□□□ 1.32
PDXDC1-205ENST00000535621 YY1P25490 414 aa23.32■■□□□ 1.32
PDXDC1-205ENST00000535621 CACNB1Q02641 598 aaPredicted RBP23.32■■□□□ 1.32
PDXDC1-205ENST00000535621 RAD51AP2Q09MP3 1159 aa23.32■■□□□ 1.32
PDXDC1-205ENST00000535621 GIT2Q14161 759 aa23.32■■□□□ 1.32
PDXDC1-205ENST00000535621 CYP4F22Q6NT55 531 aa23.32■■□□□ 1.32
PDXDC1-205ENST00000535621 PAXIP1Q6ZW49 1069 aaPredicted RBP23.32■■□□□ 1.32
PDXDC1-205ENST00000535621 TMC6Q7Z403 805 aa23.32■■□□□ 1.32
PDXDC1-205ENST00000535621 GUF1Q8N442 669 aaKnown RBP23.32■■□□□ 1.32
PDXDC1-205ENST00000535621 GPRC5AQ8NFJ5 357 aa23.32■■□□□ 1.32
PDXDC1-205ENST00000535621 PCDHA2Q9Y5H9 948 aa23.32■■□□□ 1.32
PDXDC1-205ENST00000535621 BICDL2A1A5D9 508 aa23.31■■□□□ 1.32
PDXDC1-205ENST00000535621 SOWAHBA6NEL2 793 aa23.31■■□□□ 1.32
PDXDC1-205ENST00000535621 STAM2O75886 525 aa23.31■■□□□ 1.32
PDXDC1-205ENST00000535621 SLC25A27O95847 323 aa23.31■■□□□ 1.32
PDXDC1-205ENST00000535621 KRT18P05783 430 aaKnown RBP23.31■■□□□ 1.32
PDXDC1-205ENST00000535621 NLRX1Q86UT6 975 aa23.31■■□□□ 1.32
PDXDC1-205ENST00000535621 BANK1Q8NDB2 785 aa23.31■■□□□ 1.32
PDXDC1-205ENST00000535621 NACC1Q96RE7 527 aa23.31■■□□□ 1.32
PDXDC1-205ENST00000535621 IWS1Q96ST2 819 aa23.31■■□□□ 1.32
PDXDC1-205ENST00000535621 PARK7Q99497 189 aaKnown RBP23.31■■□□□ 1.32
PDXDC1-205ENST00000535621 DOCK3Q8IZD9 2030 aa23.31■■□□□ 1.32
PDXDC1-205ENST00000535621 LRRC37A2A6NM11 1700 aa23.31■■□□□ 1.32
PDXDC1-205ENST00000535621 MANSC4A6NHS7 340 aaPredicted RBP23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 ZBTB39O15060 712 aa23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 NR1I3Q14994 352 aa23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 FAM26FQ5R3K3 315 aa23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 CENPPQ6IPU0 288 aa23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 IRF2BP1Q8IU81 584 aa23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 VSTM4Q8IW00 320 aa23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 GLIS3Q8NEA6 775 aa23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 TRIM47Q96LD4 638 aa23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 CTAGE1Q96RT6 745 aa23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 DUSP9Q99956 384 aaKnown RBP23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 REEP2Q9BRK0 252 aa23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 RUSC1Q9BVN2 902 aa23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 CPA4Q9UI42 421 aa23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 LRRC10BA6NIK2 292 aa23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 P4HBP07237 508 aaKnown RBP23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 ANKRD40Q6AI12 368 aa23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 FGD4Q96M96 766 aa23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 SEMA6BQ9H3T3 888 aa23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 ADD3Q9UEY8 706 aaKnown RBP23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 PLXNA1Q9UIW2 1896 aa23.3■■□□□ 1.32
PDXDC1-205ENST00000535621 SPAG1Q07617 926 aa23.29■■□□□ 1.32
PDXDC1-205ENST00000535621 HERC4Q5GLZ8 1057 aaPredicted RBP23.29■■□□□ 1.32
PDXDC1-205ENST00000535621 TCP11X2Q5H9J9 407 aa23.29■■□□□ 1.32
PDXDC1-205ENST00000535621 RINT1Q6NUQ1 792 aa23.29■■□□□ 1.32
PDXDC1-205ENST00000535621 CACTINQ8WUQ7 758 aaKnown RBP23.29■■□□□ 1.32
PDXDC1-205ENST00000535621 MMP19Q99542 508 aa23.29■■□□□ 1.32
PDXDC1-205ENST00000535621 THAP9Q9H5L6 903 aa23.29■■□□□ 1.32
PDXDC1-205ENST00000535621 LIMA1Q9UHB6 759 aaKnown RBP23.29■■□□□ 1.32
PDXDC1-205ENST00000535621 POTEB2H3BUK9 544 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 CCNE2O96020 404 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 ARID5BQ14865 1188 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 FAM133AQ8N9E0 248 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 SAMM50Q9Y512 469 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 KCNJ18B7U540 433 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 KCNA2P16389 499 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 ALDH5A1P51649 535 aaPredicted RBP23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 KRT76Q01546 638 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 LRMPQ12912 555 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 KCNJ12Q14500 433 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 KRT31Q15323 416 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 LRRC41Q15345 812 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 IFNL1Q8IU54 200 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 LRRC8AQ8IWT6 810 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 CSGALNACT2Q8N6G5 542 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 CDHR1Q96JP9 859 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 SRRTQ9BXP5 876 aaKnown RBP23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 FGFBP2Q9BYJ0 223 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 ZSWIM4Q9H7M6 989 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 MORF4L1Q9UBU8 362 aa23.28■■□□□ 1.32
PDXDC1-205ENST00000535621 LOXHD1Q8IVV2 1947 aa23.27■■□□□ 1.32
PDXDC1-205ENST00000535621 ADGRA2Q96PE1 1338 aa23.27■■□□□ 1.32
PDXDC1-205ENST00000535621 GCLCP48506 637 aaPredicted RBP23.27■■□□□ 1.32
PDXDC1-205ENST00000535621 GSDMDP57764 484 aa23.27■■□□□ 1.32
PDXDC1-205ENST00000535621 TAF1CQ15572 869 aaPredicted RBP23.27■■□□□ 1.32
PDXDC1-205ENST00000535621 PTPN21Q16825 1174 aa23.27■■□□□ 1.32
PDXDC1-205ENST00000535621 C1orf186Q6ZWK4 172 aa23.27■■□□□ 1.32
PDXDC1-205ENST00000535621 NOC3LQ8WTT2 800 aaKnown RBP23.27■■□□□ 1.32
PDXDC1-205ENST00000535621 MROH8Q9H579 483 aa23.27■■□□□ 1.32
PDXDC1-205ENST00000535621 BCAS3Q9H6U6 928 aa23.27■■□□□ 1.32
PDXDC1-205ENST00000535621 TBC1D7Q9P0N9 293 aa23.27■■□□□ 1.32
PDXDC1-205ENST00000535621 SPATA31C2B4DYI2 1134 aa23.26■■□□□ 1.31
PDXDC1-205ENST00000535621 SFNP31947 248 aa23.26■■□□□ 1.31
PDXDC1-205ENST00000535621 COPB2P35606 906 aa23.26■■□□□ 1.31
PDXDC1-205ENST00000535621 JAK3P52333 1124 aa23.26■■□□□ 1.31
PDXDC1-205ENST00000535621 STXBP2Q15833 593 aa23.26■■□□□ 1.31
PDXDC1-205ENST00000535621 GNPTABQ3T906 1256 aa23.26■■□□□ 1.31
PDXDC1-205ENST00000535621 MYOCDQ8IZQ8 938 aa23.26■■□□□ 1.31
PDXDC1-205ENST00000535621 GTF3C2Q8WUA4 911 aaPredicted RBP23.26■■□□□ 1.31
PDXDC1-205ENST00000535621 RTN4Q9NQC3 1192 aaKnown RBP23.26■■□□□ 1.31
PDXDC1-205ENST00000535621 WDR64B1ANS9 1081 aa23.26■■□□□ 1.31
PDXDC1-205ENST00000535621 QARSP47897 775 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms