RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 IFNAR1P17181 557 aa19.58■□□□□ 0.73
SFSWAP-203ENST00000535236 MX2P20592 715 aa19.58■□□□□ 0.73
SFSWAP-203ENST00000535236 EPHB4P54760 987 aa19.58■□□□□ 0.73
SFSWAP-203ENST00000535236 CCDC197Q8NCU1 140 aa19.58■□□□□ 0.73
SFSWAP-203ENST00000535236 RNF217Q8TC41 542 aa19.58■□□□□ 0.73
SFSWAP-203ENST00000535236 DEPDC1BQ8WUY9 529 aa19.58■□□□□ 0.73
SFSWAP-203ENST00000535236 CCNE1P24864 410 aa19.58■□□□□ 0.73
SFSWAP-203ENST00000535236 HP1BP3Q5SSJ5 553 aaPredicted RBP19.58■□□□□ 0.73
SFSWAP-203ENST00000535236 BSDC1Q9NW68 430 aaPredicted RBP19.58■□□□□ 0.73
SFSWAP-203ENST00000535236 TOM1L1O75674 476 aa19.58■□□□□ 0.72
SFSWAP-203ENST00000535236 FTCDO95954 541 aa19.58■□□□□ 0.72
SFSWAP-203ENST00000535236 SERPING1P05155 500 aa19.58■□□□□ 0.72
SFSWAP-203ENST00000535236 ASNSP08243 561 aa19.58■□□□□ 0.72
SFSWAP-203ENST00000535236 GNAT1P11488 350 aa19.58■□□□□ 0.72
SFSWAP-203ENST00000535236 CDC25AP30304 524 aa19.58■□□□□ 0.72
SFSWAP-203ENST00000535236 GOLGA8FQ08AF8 430 aa19.58■□□□□ 0.72
SFSWAP-203ENST00000535236 GOLGA8DPQ0D2H9 430 aa19.58■□□□□ 0.72
SFSWAP-203ENST00000535236 TTC19Q6DKK2 380 aaPredicted RBP19.58■□□□□ 0.72
SFSWAP-203ENST00000535236 RSBN1LQ6PCB5 846 aaPredicted RBP19.58■□□□□ 0.72
SFSWAP-203ENST00000535236 CDC26Q8NHZ8 85 aa19.58■□□□□ 0.72
SFSWAP-203ENST00000535236 ZSWIM5Q9P217 1185 aa19.58■□□□□ 0.72
SFSWAP-203ENST00000535236 IGSF1Q8N6C5 1336 aa19.58■□□□□ 0.72
SFSWAP-203ENST00000535236 ZBED1O96006 694 aa19.58■□□□□ 0.72
SFSWAP-203ENST00000535236 JAK3P52333 1124 aa19.58■□□□□ 0.72
SFSWAP-203ENST00000535236 UNC5CLQ8IV45 518 aa19.58■□□□□ 0.72
SFSWAP-203ENST00000535236 FTOQ9C0B1 505 aaKnown RBP eCLIP19.58■□□□□ 0.72
SFSWAP-203ENST00000535236 LDHAP00338 332 aaKnown RBP19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 DPCR1Q3MIW9 517 aa19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 RWDD4Q6NW29 188 aaKnown RBP19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 OSBP2Q969R2 916 aa19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 MOCS3O95396 460 aa19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 ERICH1Q86X53 443 aa19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 TDRD7Q8NHU6 1098 aaKnown RBP19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 RABGGTAQ92696 567 aa19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 HEG1Q9ULI3 1381 aa19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 ADGRL2O95490 1459 aa19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 MMP10P09238 476 aa19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 BZW1Q7L1Q6 419 aaKnown RBP19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 PDE11AQ9HCR9 933 aa19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 MID2Q9UJV3 735 aa19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 SH3BGRP55822 239 aaPredicted RBP19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 RNF219Q5W0B1 726 aaPredicted RBP19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 SEPT12Q8IYM1 358 aa19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 PPP1R9AQ9ULJ8 1098 aa19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 PLEKHG1Q9ULL1 1385 aa19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 SCYL3Q8IZE3 742 aa19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 DCAF4Q8WV16 495 aa19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 TTC25Q96NG3 672 aa19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 PIM2Q9P1W9 311 aa19.57■□□□□ 0.72
SFSWAP-203ENST00000535236 DHX38Q92620 1227 aaKnown RBP19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 ALKBH8Q96BT7 664 aaKnown RBP19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 TSPYL2Q9H2G4 693 aaPredicted RBP19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 C21orf2O43822 256 aa19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 SLC8A1P32418 973 aa19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 EIF4A3P38919 411 aaKnown RBP19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 PEX3P56589 373 aa19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 TRIP13Q15645 432 aaPredicted RBP19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 ZKSCAN8Q15776 578 aaPredicted RBP19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 CDO1Q16878 200 aa19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 GPR101Q96P66 508 aaPredicted RBP19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 MRPL46Q9H2W6 279 aaKnown RBP19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 SLC13A4Q9UKG4 626 aa19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 CHEK2O96017 543 aa19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 ZNF667Q5HYK9 610 aa19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 KLC3Q6P597 504 aa19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 PRPF38AQ8NAV1 312 aaKnown RBP19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 LINC00301Q8NCQ3 95 aa19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 SRPRBQ9Y5M8 271 aaKnown RBP19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 NEO1Q92859 1461 aa19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 STK25O00506 426 aa19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 PPP4R3CPQ6ZMV5 832 aa19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 THNSL1Q8IYQ7 743 aa19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 NHEJ1Q9H9Q4 299 aaPredicted RBP19.56■□□□□ 0.72
SFSWAP-203ENST00000535236 GH2P01242 217 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 TRIM67Q6ZTA4 783 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 ELMOD1Q8N336 334 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 HSPH1Q92598 858 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 FAM167AQ96KS9 214 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 ZWILCHQ9H900 591 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 PIH1D3Q9NQM4 214 aaKnown RBP19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 SCINQ9Y6U3 715 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 C2orf54Q08AI8 447 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 SLMAPQ14BN4 828 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 CCDC124Q96CT7 223 aaKnown RBP19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 SUCLA2Q9P2R7 463 aaPredicted RBP19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 RNF14Q9UBS8 474 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 ZBED6P86452 979 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 AP3B2Q13367 1082 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 RASGRF1Q13972 1273 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 BBS9Q3SYG4 887 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 SUSD4Q5VX71 490 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 EFHD1Q9BUP0 239 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 BHMT2Q9H2M3 363 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 FBXO40Q9UH90 709 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 RECQLP46063 649 aaPredicted RBP19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 STXBP2Q15833 593 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 SRRM1Q8IYB3 904 aaKnown RBP19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 GIMAP8Q8ND71 665 aaPredicted RBP19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 OSBPL3Q9H4L5 887 aa19.55■□□□□ 0.72
SFSWAP-203ENST00000535236 PSMA2P25787 234 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms