RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 MOXD1Q6UVY6 613 aa15.14■□□□□ 0.01
CMTM1-219ENST00000533953 RUFY4Q6ZNE9 571 aa15.14■□□□□ 0.01
CMTM1-219ENST00000533953 DEFB128Q7Z7B8 93 aa15.14■□□□□ 0.01
CMTM1-219ENST00000533953 LMBR1Q8WVP7 490 aa15.14■□□□□ 0.01
CMTM1-219ENST00000533953 RIT2Q99578 217 aa15.14■□□□□ 0.01
CMTM1-219ENST00000533953 TEKT3Q9BXF9 490 aa15.14■□□□□ 0.01
CMTM1-219ENST00000533953 ZNF302Q9NR11 478 aa15.14■□□□□ 0.01
CMTM1-219ENST00000533953 ERAP1Q9NZ08 941 aa15.14■□□□□ 0.01
CMTM1-219ENST00000533953 GABBR1Q9UBS5 961 aa15.14■□□□□ 0.01
CMTM1-219ENST00000533953 SAMM50Q9Y512 469 aa15.14■□□□□ 0.01
CMTM1-219ENST00000533953 EML1O00423 815 aa15.13■□□□□ 0.01
CMTM1-219ENST00000533953 KRT76Q01546 638 aa15.13■□□□□ 0.01
CMTM1-219ENST00000533953 PPFIA1Q13136 1202 aa15.13■□□□□ 0.01
CMTM1-219ENST00000533953 ZNF174Q15697 407 aa15.13■□□□□ 0.01
CMTM1-219ENST00000533953 GRIK4Q16099 956 aa15.13■□□□□ 0.01
CMTM1-219ENST00000533953 UGCGQ16739 394 aa15.13■□□□□ 0.01
CMTM1-219ENST00000533953 TRIM71Q2Q1W2 868 aaKnown RBP15.13■□□□□ 0.01
CMTM1-219ENST00000533953 MARCH8Q5T0T0 291 aa15.13■□□□□ 0.01
CMTM1-219ENST00000533953 MCTP1Q6DN14 999 aa15.13■□□□□ 0.01
CMTM1-219ENST00000533953 ZNF746Q6NUN9 644 aaPredicted RBP15.13■□□□□ 0.01
CMTM1-219ENST00000533953 PDXDC2PQ6P474 469 aa15.13■□□□□ 0.01
CMTM1-219ENST00000533953 PLPPR4Q7Z2D5 763 aa15.13■□□□□ 0.01
CMTM1-219ENST00000533953 TMEM199Q8N511 208 aa15.13■□□□□ 0.01
CMTM1-219ENST00000533953 OSBPL7Q9BZF2 842 aa15.13■□□□□ 0.01
CMTM1-219ENST00000533953 KCNMB3Q9NPA1 279 aa15.13■□□□□ 0.01
CMTM1-219ENST00000533953 DISC1Q9NRI5 854 aa15.13■□□□□ 0.01
CMTM1-219ENST00000533953 TRPC6Q9Y210 931 aa15.13■□□□□ 0.01
CMTM1-219ENST00000533953 PCDHA10Q9Y5I2 948 aa15.13■□□□□ 0.01
CMTM1-219ENST00000533953 EMSYQ7Z589 1322 aa15.13■□□□□ 0.01
CMTM1-219ENST00000533953 TRIOBPQ9H2D6 2365 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 POTEB3A0JP26 581 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 SOX1O00570 391 aaPredicted RBP15.12■□□□□ 0.01
CMTM1-219ENST00000533953 MARCH6O60337 910 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 PSAPP07602 524 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 IQCF3P0C7M6 154 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 CKBP12277 381 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 HOXC8P31273 242 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 MCM7P33993 719 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 ADAM17P78536 824 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 PTK7Q13308 1070 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 GNL2Q13823 731 aaKnown RBP15.12■□□□□ 0.01
CMTM1-219ENST00000533953 GPNMBQ14956 572 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 ZNF618Q5T7W0 954 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 POTEBQ6S5H4 581 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 ZNF365Q70YC5 407 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 MIER3Q7Z3K6 550 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 SERINC5Q86VE9 423 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 CKAP2LQ8IYA6 745 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 RETREG2Q8NC44 543 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.12■□□□□ 0.01
CMTM1-219ENST00000533953 TMEM60Q9H2L4 133 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 FOXP1Q9H334 677 aaPredicted RBP15.12■□□□□ 0.01
CMTM1-219ENST00000533953 TCEAL9Q9UHQ7 104 aa15.12■□□□□ 0.01
CMTM1-219ENST00000533953 TMEM150BA6NC51 233 aa15.11■□□□□ 0.01
CMTM1-219ENST00000533953 WDR64B1ANS9 1081 aa15.11■□□□□ 0.01
CMTM1-219ENST00000533953 K7ELQ4 463 aaPredicted RBP15.11■□□□□ 0.01
CMTM1-219ENST00000533953 ZNF862O60290 1169 aa15.11■□□□□ 0.01
CMTM1-219ENST00000533953 CTSHP09668 335 aa15.11■□□□□ 0.01
CMTM1-219ENST00000533953 GCFC2P16383 781 aaKnown RBP15.11■□□□□ 0.01
CMTM1-219ENST00000533953 THPOP40225 353 aa15.11■□□□□ 0.01
CMTM1-219ENST00000533953 TMEM240Q5SV17 173 aa15.11■□□□□ 0.01
CMTM1-219ENST00000533953 FAM160B1Q5W0V3 765 aa15.11■□□□□ 0.01
CMTM1-219ENST00000533953 LARP1BQ659C4 914 aaKnown RBP15.11■□□□□ 0.01
CMTM1-219ENST00000533953 TRAF7Q6Q0C0 670 aa15.11■□□□□ 0.01
CMTM1-219ENST00000533953 B3GNT9Q6UX72 402 aa15.11■□□□□ 0.01
CMTM1-219ENST00000533953 NOSTRINQ8IVI9 506 aa15.11■□□□□ 0.01
CMTM1-219ENST00000533953 TDHQ8IZJ6 230 aa15.11■□□□□ 0.01
CMTM1-219ENST00000533953 IL27Q8NEV9 243 aa15.11■□□□□ 0.01
CMTM1-219ENST00000533953 VAV3Q9UKW4 847 aa15.11■□□□□ 0.01
CMTM1-219ENST00000533953 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.11■□□□□ 0.01
CMTM1-219ENST00000533953 MAFBQ9Y5Q3 323 aaPredicted RBP15.11■□□□□ 0.01
CMTM1-219ENST00000533953 H3BQV1 296 aa15.1■□□□□ 0.01
CMTM1-219ENST00000533953 U2AF2P26368 475 aaKnown RBP eCLIP15.1■□□□□ 0.01
CMTM1-219ENST00000533953 TXKP42681 527 aa15.1■□□□□ 0.01
CMTM1-219ENST00000533953 TOB1P50616 345 aaPredicted RBP15.1■□□□□ 0.01
CMTM1-219ENST00000533953 PPIGQ13427 754 aaKnown RBP eCLIP15.1■□□□□ 0.01
CMTM1-219ENST00000533953 BFSP2Q13515 415 aa15.1■□□□□ 0.01
CMTM1-219ENST00000533953 MBTPS1Q14703 1052 aa15.1■□□□□ 0.01
CMTM1-219ENST00000533953 TCTN1Q2MV58 587 aa15.1■□□□□ 0.01
CMTM1-219ENST00000533953 OTOP2Q7RTS6 562 aa15.1■□□□□ 0.01
CMTM1-219ENST00000533953 SMAP1Q8IYB5 467 aaPredicted RBP15.1■□□□□ 0.01
CMTM1-219ENST00000533953 BANK1Q8NDB2 785 aa15.1■□□□□ 0.01
CMTM1-219ENST00000533953 AFAP1L1Q8TED9 768 aa15.1■□□□□ 0.01
CMTM1-219ENST00000533953 LRCH3Q96II8 777 aa15.1■□□□□ 0.01
CMTM1-219ENST00000533953 SH2D3AQ9BRG2 576 aa15.1■□□□□ 0.01
CMTM1-219ENST00000533953 FAM49AQ9H0Q0 323 aaPredicted RBP15.1■□□□□ 0.01
CMTM1-219ENST00000533953 IL23AQ9NPF7 189 aa15.1■□□□□ 0.01
CMTM1-219ENST00000533953 NRCAMQ92823 1304 aa15.1■□□□□ 0.01
CMTM1-219ENST00000533953 LTBP2Q14767 1821 aa15.09■□□□□ 0.01
CMTM1-219ENST00000533953 NEMFO60524 1076 aa15.09■□□□□ 0.01
CMTM1-219ENST00000533953 NBNO60934 754 aa15.09■□□□□ 0.01
CMTM1-219ENST00000533953 GNAT1P11488 350 aa15.09■□□□□ 0.01
CMTM1-219ENST00000533953 SELPP16109 830 aa15.09■□□□□ 0.01
CMTM1-219ENST00000533953 KLRC1P26715 233 aa15.09■□□□□ 0.01
CMTM1-219ENST00000533953 CALCRLQ16602 461 aa15.09■□□□□ 0.01
CMTM1-219ENST00000533953 TTC38Q5R3I4 469 aa15.09■□□□□ 0.01
CMTM1-219ENST00000533953 NCAPH2Q6IBW4 605 aa15.09■□□□□ 0.01
CMTM1-219ENST00000533953 LRRC8DQ7L1W4 858 aa15.09■□□□□ 0.01
CMTM1-219ENST00000533953 SPRYD3Q8NCJ5 442 aa15.09■□□□□ 0.01
CMTM1-219ENST00000533953 ATP8B4Q8TF62 1192 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms