RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ACTN1P12814 892 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 CYP3A7P24462 503 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 FXR1P51114 621 aaKnown RBP eCLIP15.13■□□□□ 0.01
CAPN1-227ENST00000533909 IGBP1P78318 339 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 GUCY1B3Q02153 619 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 ST3GAL1Q11201 340 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 NR5A1Q13285 461 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 GRIK4Q16099 956 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 PDXDC2PQ6P474 469 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 ZNF365Q70YC5 407 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 LRRC8DQ7L1W4 858 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 PLPPR4Q7Z2D5 763 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 SERINC5Q86VE9 423 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 LENG9Q96B70 501 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 RIT2Q99578 217 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.13■□□□□ 0.01
CAPN1-227ENST00000533909 PCDHA10Q9Y5I2 948 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 RRN3P2A6NIE6 340 aa15.12■□□□□ 0.01
CAPN1-227ENST00000533909 DHX15O43143 795 aaKnown RBP15.12■□□□□ 0.01
CAPN1-227ENST00000533909 TREHO43280 583 aa15.12■□□□□ 0.01
CAPN1-227ENST00000533909 PARNO95453 639 aaKnown RBP15.12■□□□□ 0.01
CAPN1-227ENST00000533909 IQCF3P0C7M6 154 aa15.12■□□□□ 0.01
CAPN1-227ENST00000533909 CKBP12277 381 aa15.12■□□□□ 0.01
CAPN1-227ENST00000533909 JAK3P52333 1124 aa15.12■□□□□ 0.01
CAPN1-227ENST00000533909 SWSAP1Q6NVH7 229 aa15.12■□□□□ 0.01
CAPN1-227ENST00000533909 ABHD15Q6UXT9 468 aa15.12■□□□□ 0.01
CAPN1-227ENST00000533909 RSPH3Q86UC2 560 aa15.12■□□□□ 0.01
CAPN1-227ENST00000533909 LMBR1Q8WVP7 490 aa15.12■□□□□ 0.01
CAPN1-227ENST00000533909 SLC5A5Q92911 643 aa15.12■□□□□ 0.01
CAPN1-227ENST00000533909 TMX3Q96JJ7 454 aa15.12■□□□□ 0.01
CAPN1-227ENST00000533909 TUBE1Q9UJT0 475 aa15.12■□□□□ 0.01
CAPN1-227ENST00000533909 POTEB3A0JP26 581 aa15.11■□□□□ 0.01
CAPN1-227ENST00000533909 ZBBXA8MT70 800 aa15.11■□□□□ 0.01
CAPN1-227ENST00000533909 BTBD18B2RXH4 712 aa15.11■□□□□ 0.01
CAPN1-227ENST00000533909 ATG7O95352 703 aa15.11■□□□□ 0.01
CAPN1-227ENST00000533909 BAG4O95429 457 aaKnown RBP15.11■□□□□ 0.01
CAPN1-227ENST00000533909 SFNP31947 248 aa15.11■□□□□ 0.01
CAPN1-227ENST00000533909 PLCB4Q15147 1175 aa15.11■□□□□ 0.01
CAPN1-227ENST00000533909 TMEM240Q5SV17 173 aa15.11■□□□□ 0.01
CAPN1-227ENST00000533909 PPP4R3AQ6IN85 833 aa15.11■□□□□ 0.01
CAPN1-227ENST00000533909 TAF2Q6P1X5 1199 aa15.11■□□□□ 0.01
CAPN1-227ENST00000533909 POTEBQ6S5H4 581 aa15.11■□□□□ 0.01
CAPN1-227ENST00000533909 OTOP2Q7RTS6 562 aa15.11■□□□□ 0.01
CAPN1-227ENST00000533909 DHX38Q92620 1227 aaKnown RBP15.11■□□□□ 0.01
CAPN1-227ENST00000533909 PCYT2Q99447 389 aa15.11■□□□□ 0.01
CAPN1-227ENST00000533909 DISC1Q9NRI5 854 aa15.11■□□□□ 0.01
CAPN1-227ENST00000533909 RSPH10B2B2RC85 870 aa15.1■□□□□ 0.01
CAPN1-227ENST00000533909 CAND2O75155 1236 aa15.1■□□□□ 0.01
CAPN1-227ENST00000533909 CTSHP09668 335 aa15.1■□□□□ 0.01
CAPN1-227ENST00000533909 RSPH10BP0C881 870 aa15.1■□□□□ 0.01
CAPN1-227ENST00000533909 INSRRP14616 1297 aa15.1■□□□□ 0.01
CAPN1-227ENST00000533909 RBL2Q08999 1139 aa15.1■□□□□ 0.01
CAPN1-227ENST00000533909 HIC1Q14526 733 aa15.1■□□□□ 0.01
CAPN1-227ENST00000533909 C16orf59Q7L2K0 433 aa15.1■□□□□ 0.01
CAPN1-227ENST00000533909 TRMT1LQ7Z2T5 733 aaKnown RBP15.1■□□□□ 0.01
CAPN1-227ENST00000533909 MIER3Q7Z3K6 550 aa15.1■□□□□ 0.01
CAPN1-227ENST00000533909 CCDC60Q8IWA6 550 aaPredicted RBP15.1■□□□□ 0.01
CAPN1-227ENST00000533909 LRCH3Q96II8 777 aa15.1■□□□□ 0.01
CAPN1-227ENST00000533909 CTAGE1Q96RT6 745 aa15.1■□□□□ 0.01
CAPN1-227ENST00000533909 GABBR1Q9UBS5 961 aa15.1■□□□□ 0.01
CAPN1-227ENST00000533909 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.1■□□□□ 0.01
CAPN1-227ENST00000533909 KAT6AQ92794 2004 aa15.1■□□□□ 0.01
CAPN1-227ENST00000533909 FAM205CA6NFA0 338 aa15.09■□□□□ 0.01
CAPN1-227ENST00000533909 SOX1O00570 391 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-227ENST00000533909 SLC37A4O43826 429 aa15.09■□□□□ 0.01
CAPN1-227ENST00000533909 HBP1O60381 514 aa15.09■□□□□ 0.01
CAPN1-227ENST00000533909 RPLP2P05387 115 aaKnown RBP15.09■□□□□ 0.01
CAPN1-227ENST00000533909 ATP2B1P20020 1258 aa15.09■□□□□ 0.01
CAPN1-227ENST00000533909 HOXC8P31273 242 aa15.09■□□□□ 0.01
CAPN1-227ENST00000533909 ZNF618Q5T7W0 954 aa15.09■□□□□ 0.01
CAPN1-227ENST00000533909 FBXO18Q8NFZ0 1043 aa15.09■□□□□ 0.01
CAPN1-227ENST00000533909 ATP8B4Q8TF62 1192 aa15.09■□□□□ 0.01
CAPN1-227ENST00000533909 HERVK_113Q902F9 699 aa15.09■□□□□ 0.01
CAPN1-227ENST00000533909 GJA10Q969M2 543 aa15.09■□□□□ 0.01
CAPN1-227ENST00000533909 FAM167AQ96KS9 214 aa15.09■□□□□ 0.01
CAPN1-227ENST00000533909 FAM20AQ96MK3 541 aa15.09■□□□□ 0.01
CAPN1-227ENST00000533909 MBOAT7Q96N66 472 aa15.09■□□□□ 0.01
CAPN1-227ENST00000533909 UNC45AQ9H3U1 944 aa15.09■□□□□ 0.01
CAPN1-227ENST00000533909 SMC3Q9UQE7 1217 aa15.09■□□□□ 0.01
CAPN1-227ENST00000533909 SLC4A7Q9Y6M7 1214 aa15.09■□□□□ 0.01
CAPN1-227ENST00000533909 IGKV6D-21A0A0A0MT36 114 aa15.08■□□□□ 0
CAPN1-227ENST00000533909 H3BQV1 296 aa15.08■□□□□ 0
CAPN1-227ENST00000533909 EDIL3O43854 480 aa15.08■□□□□ 0
CAPN1-227ENST00000533909 PSMD10O75832 226 aa15.08■□□□□ 0
CAPN1-227ENST00000533909 CD2BP2O95400 341 aaKnown RBP15.08■□□□□ 0
CAPN1-227ENST00000533909 KCNJ6P48051 423 aa15.08■□□□□ 0
CAPN1-227ENST00000533909 CALCRLQ16602 461 aa15.08■□□□□ 0
CAPN1-227ENST00000533909 TRIM71Q2Q1W2 868 aaKnown RBP15.08■□□□□ 0
CAPN1-227ENST00000533909 EARS2Q5JPH6 523 aaKnown RBP15.08■□□□□ 0
CAPN1-227ENST00000533909 POTEDQ86YR6 584 aa15.08■□□□□ 0
CAPN1-227ENST00000533909 SLFN12Q8IYM2 578 aa15.08■□□□□ 0
CAPN1-227ENST00000533909 RDM1Q8NG50 284 aa15.08■□□□□ 0
CAPN1-227ENST00000533909 ETNPPLQ8TBG4 499 aa15.08■□□□□ 0
CAPN1-227ENST00000533909 TNFRSF25Q93038 417 aa15.08■□□□□ 0
CAPN1-227ENST00000533909 WNT8BQ93098 351 aa15.08■□□□□ 0
CAPN1-227ENST00000533909 FAM49AQ9H0Q0 323 aaPredicted RBP15.08■□□□□ 0
CAPN1-227ENST00000533909 FOXP1Q9H334 677 aaPredicted RBP15.08■□□□□ 0
CAPN1-227ENST00000533909 NRBP2Q9NSY0 501 aa15.08■□□□□ 0
CAPN1-227ENST00000533909 NOL7Q9UMY1 257 aaKnown RBP15.08■□□□□ 0
CAPN1-227ENST00000533909 CEP131Q9UPN4 1083 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms