RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 B3GNT9Q6UX72 402 aa22.33■■□□□ 1.17
CHEK1-215ENST00000533778 RNPEPQ9H4A4 650 aa22.33■■□□□ 1.17
CHEK1-215ENST00000533778 VAV3Q9UKW4 847 aa22.33■■□□□ 1.17
CHEK1-215ENST00000533778 ZMYND8Q9ULU4 1186 aaPredicted RBP22.33■■□□□ 1.17
CHEK1-215ENST00000533778 MAFBQ9Y5Q3 323 aaPredicted RBP22.33■■□□□ 1.17
CHEK1-215ENST00000533778 WNT7AO00755 349 aa22.32■■□□□ 1.16
CHEK1-215ENST00000533778 OR52Z1P0C646 297 aa22.32■■□□□ 1.16
CHEK1-215ENST00000533778 TXKP42681 527 aa22.32■■□□□ 1.16
CHEK1-215ENST00000533778 TOB1P50616 345 aaPredicted RBP22.32■■□□□ 1.16
CHEK1-215ENST00000533778 GDF6Q6KF10 455 aaPredicted RBP22.32■■□□□ 1.16
CHEK1-215ENST00000533778 CCDC60Q8IWA6 550 aaPredicted RBP22.32■■□□□ 1.16
CHEK1-215ENST00000533778 CKAP2LQ8IYA6 745 aa22.32■■□□□ 1.16
CHEK1-215ENST00000533778 ATP6V0A1Q93050 837 aa22.32■■□□□ 1.16
CHEK1-215ENST00000533778 LBHD1Q9BQE6 289 aaPredicted RBP22.32■■□□□ 1.16
CHEK1-215ENST00000533778 TTC12Q9H892 705 aaPredicted RBP22.32■■□□□ 1.16
CHEK1-215ENST00000533778 GABBR1Q9UBS5 961 aa22.32■■□□□ 1.16
CHEK1-215ENST00000533778 TBX21Q9UL17 535 aa22.32■■□□□ 1.16
CHEK1-215ENST00000533778 TRPC6Q9Y210 931 aa22.32■■□□□ 1.16
CHEK1-215ENST00000533778 POTEB3A0JP26 581 aa22.31■■□□□ 1.16
CHEK1-215ENST00000533778 TRIM43BA6NCK2 446 aa22.31■■□□□ 1.16
CHEK1-215ENST00000533778 RRN3P2A6NIE6 340 aa22.31■■□□□ 1.16
CHEK1-215ENST00000533778 LAD1O00515 517 aa22.31■■□□□ 1.16
CHEK1-215ENST00000533778 DKC1O60832 514 aaKnown RBP eCLIP22.31■■□□□ 1.16
CHEK1-215ENST00000533778 RAG1P15918 1043 aa22.31■■□□□ 1.16
CHEK1-215ENST00000533778 SYN1P17600 705 aa22.31■■□□□ 1.16
CHEK1-215ENST00000533778 PPFIA1Q13136 1202 aa22.31■■□□□ 1.16
CHEK1-215ENST00000533778 POTEBQ6S5H4 581 aa22.31■■□□□ 1.16
CHEK1-215ENST00000533778 SH3RF1Q7Z6J0 888 aa22.31■■□□□ 1.16
CHEK1-215ENST00000533778 CCDC155Q8N6L0 562 aa22.31■■□□□ 1.16
CHEK1-215ENST00000533778 PPP1R13LQ8WUF5 828 aa22.31■■□□□ 1.16
CHEK1-215ENST00000533778 TRIM43Q96BQ3 446 aaPredicted RBP22.31■■□□□ 1.16
CHEK1-215ENST00000533778 FAM167AQ96KS9 214 aa22.31■■□□□ 1.16
CHEK1-215ENST00000533778 ZSCAN16Q9H4T2 348 aaPredicted RBP22.31■■□□□ 1.16
CHEK1-215ENST00000533778 SCN10AQ9Y5Y9 1956 aa22.3■■□□□ 1.16
CHEK1-215ENST00000533778 HBP1O60381 514 aa22.3■■□□□ 1.16
CHEK1-215ENST00000533778 HOXC8P31273 242 aa22.3■■□□□ 1.16
CHEK1-215ENST00000533778 PLCB4Q15147 1175 aa22.3■■□□□ 1.16
CHEK1-215ENST00000533778 PRPF38BQ5VTL8 546 aaKnown RBP22.3■■□□□ 1.16
CHEK1-215ENST00000533778 ATP8B4Q8TF62 1192 aa22.3■■□□□ 1.16
CHEK1-215ENST00000533778 BBXQ8WY36 941 aaPredicted RBP22.3■■□□□ 1.16
CHEK1-215ENST00000533778 TMEM60Q9H2L4 133 aa22.3■■□□□ 1.16
CHEK1-215ENST00000533778 HIPK3Q9H422 1215 aa22.3■■□□□ 1.16
CHEK1-215ENST00000533778 SETD4Q9NVD3 440 aa22.3■■□□□ 1.16
CHEK1-215ENST00000533778 MTMR6Q9Y217 621 aa22.3■■□□□ 1.16
CHEK1-215ENST00000533778 PCDHB6Q9Y5E3 794 aa22.3■■□□□ 1.16
CHEK1-215ENST00000533778 TIMP1P01033 207 aa22.29■■□□□ 1.16
CHEK1-215ENST00000533778 PTK7Q13308 1070 aa22.29■■□□□ 1.16
CHEK1-215ENST00000533778 BFSP2Q13515 415 aa22.29■■□□□ 1.16
CHEK1-215ENST00000533778 EPHA7Q15375 998 aa22.29■■□□□ 1.16
CHEK1-215ENST00000533778 TMEM266Q2M3C6 531 aa22.29■■□□□ 1.16
CHEK1-215ENST00000533778 NCAPH2Q6IBW4 605 aa22.29■■□□□ 1.16
CHEK1-215ENST00000533778 FERMT3Q86UX7 667 aa22.29■■□□□ 1.16
CHEK1-215ENST00000533778 SPRYD3Q8NCJ5 442 aa22.29■■□□□ 1.16
CHEK1-215ENST00000533778 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.29■■□□□ 1.16
CHEK1-215ENST00000533778 NRBP2Q9NSY0 501 aa22.29■■□□□ 1.16
CHEK1-215ENST00000533778 IGSF9BQ9UPX0 1349 aa22.29■■□□□ 1.16
CHEK1-215ENST00000533778 EML1O00423 815 aa22.28■■□□□ 1.16
CHEK1-215ENST00000533778 BMP15O95972 392 aa22.28■■□□□ 1.16
CHEK1-215ENST00000533778 CYP2C9P11712 490 aa22.28■■□□□ 1.16
CHEK1-215ENST00000533778 PSMC5P62195 406 aa22.28■■□□□ 1.16
CHEK1-215ENST00000533778 PTGDRQ13258 359 aa22.28■■□□□ 1.16
CHEK1-215ENST00000533778 NBR1Q14596 966 aa22.28■■□□□ 1.16
CHEK1-215ENST00000533778 GRIK4Q16099 956 aa22.28■■□□□ 1.16
CHEK1-215ENST00000533778 RETREG2Q8NC44 543 aa22.28■■□□□ 1.16
CHEK1-215ENST00000533778 CAGE1Q8TC20 777 aa22.28■■□□□ 1.16
CHEK1-215ENST00000533778 LMBR1Q8WVP7 490 aa22.28■■□□□ 1.16
CHEK1-215ENST00000533778 CEP131Q9UPN4 1083 aa22.28■■□□□ 1.16
CHEK1-215ENST00000533778 P4HBP07237 508 aaKnown RBP22.27■■□□□ 1.16
CHEK1-215ENST00000533778 INSRRP14616 1297 aa22.27■■□□□ 1.16
CHEK1-215ENST00000533778 QARSP47897 775 aaKnown RBP22.27■■□□□ 1.16
CHEK1-215ENST00000533778 SPIRE1Q08AE8 756 aa22.27■■□□□ 1.16
CHEK1-215ENST00000533778 ZNF484Q5JVG2 852 aa22.27■■□□□ 1.16
CHEK1-215ENST00000533778 SERINC5Q86VE9 423 aa22.27■■□□□ 1.16
CHEK1-215ENST00000533778 C4orf32Q8N8J7 132 aa22.27■■□□□ 1.16
CHEK1-215ENST00000533778 NEK9Q8TD19 979 aa22.27■■□□□ 1.16
CHEK1-215ENST00000533778 NOC4LQ9BVI4 516 aaKnown RBP22.27■■□□□ 1.16
CHEK1-215ENST00000533778 RAB34Q9BZG1 259 aa22.27■■□□□ 1.16
CHEK1-215ENST00000533778 COL1A2P08123 1366 aa22.26■■□□□ 1.15
CHEK1-215ENST00000533778 PITPNM1O00562 1244 aa22.26■■□□□ 1.15
CHEK1-215ENST00000533778 OATP04181 439 aa22.26■■□□□ 1.15
CHEK1-215ENST00000533778 RPLP2P05387 115 aaKnown RBP22.26■■□□□ 1.15
CHEK1-215ENST00000533778 ATP4AP20648 1035 aa22.26■■□□□ 1.15
CHEK1-215ENST00000533778 PRPHP41219 470 aa22.26■■□□□ 1.15
CHEK1-215ENST00000533778 TECP42680 631 aa22.26■■□□□ 1.15
CHEK1-215ENST00000533778 ADAM17P78536 824 aa22.26■■□□□ 1.15
CHEK1-215ENST00000533778 ZNF200P98182 395 aaPredicted RBP22.26■■□□□ 1.15
CHEK1-215ENST00000533778 RESTQ13127 1097 aa22.26■■□□□ 1.15
CHEK1-215ENST00000533778 TAF2Q6P1X5 1199 aa22.26■■□□□ 1.15
CHEK1-215ENST00000533778 TMEM199Q8N511 208 aa22.26■■□□□ 1.15
CHEK1-215ENST00000533778 ERMNQ8TAM6 284 aa22.26■■□□□ 1.15
CHEK1-215ENST00000533778 STK24Q9Y6E0 443 aa22.26■■□□□ 1.15
CHEK1-215ENST00000533778 TREHO43280 583 aa22.25■■□□□ 1.15
CHEK1-215ENST00000533778 FXR2P51116 673 aaKnown RBP eCLIP22.25■■□□□ 1.15
CHEK1-215ENST00000533778 IGBP1P78318 339 aa22.25■■□□□ 1.15
CHEK1-215ENST00000533778 PRKCEQ02156 737 aa22.25■■□□□ 1.15
CHEK1-215ENST00000533778 HIC1Q14526 733 aa22.25■■□□□ 1.15
CHEK1-215ENST00000533778 XKR3Q5GH77 459 aa22.25■■□□□ 1.15
CHEK1-215ENST00000533778 MFSD5Q6N075 450 aa22.25■■□□□ 1.15
CHEK1-215ENST00000533778 DTHD1Q6ZMT9 781 aa22.25■■□□□ 1.15
CHEK1-215ENST00000533778 BADQ92934 168 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms