RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 PNMA1Q8ND90 353 aa14.31□□□□□ -0.12
SVIP-205ENST00000533774 GPR20Q99678 358 aa14.31□□□□□ -0.12
SVIP-205ENST00000533774 SMOC2Q9H3U7 446 aa14.31□□□□□ -0.12
SVIP-205ENST00000533774 AGO3Q9H9G7 860 aaKnown RBP14.31□□□□□ -0.12
SVIP-205ENST00000533774 CCDC171Q6TFL3 1326 aa14.31□□□□□ -0.12
SVIP-205ENST00000533774 KDM4AO75164 1064 aa14.3□□□□□ -0.12
SVIP-205ENST00000533774 TGFB3P10600 412 aa14.3□□□□□ -0.12
SVIP-205ENST00000533774 SP100P23497 879 aaPredicted RBP14.3□□□□□ -0.12
SVIP-205ENST00000533774 ID4P47928 161 aa14.3□□□□□ -0.12
SVIP-205ENST00000533774 NAALADL2Q58DX5 795 aa14.3□□□□□ -0.12
SVIP-205ENST00000533774 FBXO47Q5MNV8 452 aa14.3□□□□□ -0.12
SVIP-205ENST00000533774 CYFIP1Q7L576 1253 aa14.3□□□□□ -0.12
SVIP-205ENST00000533774 FRMD5Q7Z6J6 570 aa14.3□□□□□ -0.12
SVIP-205ENST00000533774 CMTR2Q8IYT2 770 aaKnown RBP14.3□□□□□ -0.12
SVIP-205ENST00000533774 STAG2Q8N3U4 1231 aa14.3□□□□□ -0.12
SVIP-205ENST00000533774 USP26Q9BXU7 913 aa14.3□□□□□ -0.12
SVIP-205ENST00000533774 S1PR5Q9H228 398 aa14.3□□□□□ -0.12
SVIP-205ENST00000533774 CDH22Q9UJ99 828 aa14.3□□□□□ -0.12
SVIP-205ENST00000533774 SALL3Q9BXA9 1300 aa14.3□□□□□ -0.12
SVIP-205ENST00000533774 EVPLQ92817 2033 aa14.3□□□□□ -0.12
SVIP-205ENST00000533774 DNAH14Q0VDD8 3507 aa14.29□□□□□ -0.12
SVIP-205ENST00000533774 PPFIA3O75145 1194 aa14.29□□□□□ -0.12
SVIP-205ENST00000533774 MRPS9P82933 396 aaKnown RBP14.29□□□□□ -0.12
SVIP-205ENST00000533774 SLC35G1Q2M3R5 365 aa14.29□□□□□ -0.12
SVIP-205ENST00000533774 UTP14CQ5TAP6 766 aaKnown RBP14.29□□□□□ -0.12
SVIP-205ENST00000533774 MFSD6Q6ZSS7 791 aa14.29□□□□□ -0.12
SVIP-205ENST00000533774 DGKHQ86XP1 1220 aa14.29□□□□□ -0.12
SVIP-205ENST00000533774 PPP2R3CQ969Q6 453 aa14.29□□□□□ -0.12
SVIP-205ENST00000533774 ZBTB10Q96DT7 871 aa14.29□□□□□ -0.12
SVIP-205ENST00000533774 TLE6Q9H808 572 aa14.29□□□□□ -0.12
SVIP-205ENST00000533774 HELLSQ9NRZ9 838 aa14.29□□□□□ -0.12
SVIP-205ENST00000533774 ZMYM6O95789 1325 aa14.28□□□□□ -0.12
SVIP-205ENST00000533774 GNAT1P11488 350 aa14.28□□□□□ -0.12
SVIP-205ENST00000533774 CCND2P30279 289 aa14.28□□□□□ -0.12
SVIP-205ENST00000533774 CD52P31358 61 aa14.28□□□□□ -0.12
SVIP-205ENST00000533774 ERVFC1P60507 584 aa14.28□□□□□ -0.12
SVIP-205ENST00000533774 KCNC3Q14003 757 aa14.28□□□□□ -0.12
SVIP-205ENST00000533774 ASPRV1Q53RT3 343 aa14.28□□□□□ -0.12
SVIP-205ENST00000533774 SYCE2Q6PIF2 218 aa14.28□□□□□ -0.12
SVIP-205ENST00000533774 KREMEN2Q8NCW0 462 aa14.28□□□□□ -0.12
SVIP-205ENST00000533774 MTMR8Q96EF0 704 aa14.28□□□□□ -0.12
SVIP-205ENST00000533774 APOL5Q9BWW9 433 aa14.28□□□□□ -0.12
SVIP-205ENST00000533774 AMNQ9BXJ7 453 aa14.28□□□□□ -0.12
SVIP-205ENST00000533774 CHMP4BQ9H444 224 aaKnown RBP14.28□□□□□ -0.12
SVIP-205ENST00000533774 HCSTQ9UBK5 93 aa14.28□□□□□ -0.12
SVIP-205ENST00000533774 CDY2AQ9Y6F7 541 aa14.28□□□□□ -0.12
SVIP-205ENST00000533774 MED19A0JLT2 244 aaPredicted RBP14.27□□□□□ -0.13
SVIP-205ENST00000533774 NOP56O00567 594 aaKnown RBP14.27□□□□□ -0.13
SVIP-205ENST00000533774 DHX16O60231 1041 aaKnown RBP14.27□□□□□ -0.13
SVIP-205ENST00000533774 BRD1O95696 1058 aa14.27□□□□□ -0.13
SVIP-205ENST00000533774 MX1P20591 662 aa14.27□□□□□ -0.13
SVIP-205ENST00000533774 DUSP6Q16828 381 aa14.27□□□□□ -0.13
SVIP-205ENST00000533774 MARCH8Q5T0T0 291 aa14.27□□□□□ -0.13
SVIP-205ENST00000533774 METTL7BQ6UX53 244 aa14.27□□□□□ -0.13
SVIP-205ENST00000533774 TSHZ1Q6ZSZ6 1077 aa14.27□□□□□ -0.13
SVIP-205ENST00000533774 FCHSD1Q86WN1 690 aa14.27□□□□□ -0.13
SVIP-205ENST00000533774 ADSSL1Q8N142 457 aa14.27□□□□□ -0.13
SVIP-205ENST00000533774 ENAHQ8N8S7 591 aaPredicted RBP14.27□□□□□ -0.13
SVIP-205ENST00000533774 DNAJB3Q8WWF6 145 aa14.27□□□□□ -0.13
SVIP-205ENST00000533774 NRCAMQ92823 1304 aa14.26□□□□□ -0.13
SVIP-205ENST00000533774 SPATA31C2B4DYI2 1134 aa14.26□□□□□ -0.13
SVIP-205ENST00000533774 PARP1P09874 1014 aaKnown RBP14.26□□□□□ -0.13
SVIP-205ENST00000533774 SP4Q02446 784 aa14.26□□□□□ -0.13
SVIP-205ENST00000533774 MCMDC2Q4G0Z9 681 aa14.26□□□□□ -0.13
SVIP-205ENST00000533774 NPAS4Q8IUM7 802 aa14.26□□□□□ -0.13
SVIP-205ENST00000533774 INPP4AQ96PE3 977 aaPredicted RBP14.26□□□□□ -0.13
SVIP-205ENST00000533774 KAT14Q9H8E8 782 aa14.26□□□□□ -0.13
SVIP-205ENST00000533774 RTEL1Q9NZ71 1219 aa14.26□□□□□ -0.13
SVIP-205ENST00000533774 PCDHA1Q9Y5I3 950 aa14.26□□□□□ -0.13
SVIP-205ENST00000533774 KMT2BQ9UMN6 2715 aaPredicted RBP14.26□□□□□ -0.13
SVIP-205ENST00000533774 NCOR2Q9Y618 2525 aa14.25□□□□□ -0.13
SVIP-205ENST00000533774 TPRP12270 2363 aaKnown RBP14.25□□□□□ -0.13
SVIP-205ENST00000533774 FRYLO94915 3013 aa14.25□□□□□ -0.13
SVIP-205ENST00000533774 MBLAC1A4D2B0 266 aaPredicted RBP14.25□□□□□ -0.13
SVIP-205ENST00000533774 FSCN2O14926 492 aa14.25□□□□□ -0.13
SVIP-205ENST00000533774 NMIQ13287 307 aaPredicted RBP14.25□□□□□ -0.13
SVIP-205ENST00000533774 ANKRD54Q6NXT1 300 aa14.25□□□□□ -0.13
SVIP-205ENST00000533774 TMEM184AQ6ZMB5 413 aa14.25□□□□□ -0.13
SVIP-205ENST00000533774 ZBTB33Q86T24 672 aa14.25□□□□□ -0.13
SVIP-205ENST00000533774 ESR2Q92731 530 aa14.25□□□□□ -0.13
SVIP-205ENST00000533774 NKD2Q969F2 451 aaPredicted RBP14.25□□□□□ -0.13
SVIP-205ENST00000533774 NEK1Q96PY6 1258 aa14.25□□□□□ -0.13
SVIP-205ENST00000533774 TMX1Q9H3N1 280 aa14.25□□□□□ -0.13
SVIP-205ENST00000533774 MAP3K20Q9NYL2 800 aaKnown RBP14.25□□□□□ -0.13
SVIP-205ENST00000533774 FANCMQ8IYD8 2048 aa14.25□□□□□ -0.13
SVIP-205ENST00000533774 CEP250Q9BV73 2442 aa14.25□□□□□ -0.13
SVIP-205ENST00000533774 DENND4AQ7Z401 1863 aa14.25□□□□□ -0.13
SVIP-205ENST00000533774 FRMPD4Q14CM0 1322 aa14.24□□□□□ -0.13
SVIP-205ENST00000533774 EPG5Q9HCE0 2579 aa14.24□□□□□ -0.13
SVIP-205ENST00000533774 B4E1Z4 1266 aa14.24□□□□□ -0.13
SVIP-205ENST00000533774 CHRM1P11229 460 aaPredicted RBP14.24□□□□□ -0.13
SVIP-205ENST00000533774 PCP11498 1178 aaKnown RBP14.24□□□□□ -0.13
SVIP-205ENST00000533774 TECP42680 631 aa14.24□□□□□ -0.13
SVIP-205ENST00000533774 MRPS6P82932 125 aaKnown RBP14.24□□□□□ -0.13
SVIP-205ENST00000533774 APOBRQ0VD83 1088 aa14.24□□□□□ -0.13
SVIP-205ENST00000533774 NEDD9Q14511 834 aa14.24□□□□□ -0.13
SVIP-205ENST00000533774 GRIK4Q16099 956 aa14.24□□□□□ -0.13
SVIP-205ENST00000533774 TAF2Q6P1X5 1199 aa14.24□□□□□ -0.13
SVIP-205ENST00000533774 MICAL1Q8TDZ2 1067 aa14.24□□□□□ -0.13
SVIP-205ENST00000533774 EVI5LQ96CN4 794 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms