RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 PCYT2Q99447 389 aa12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 GABBR1Q9UBS5 961 aa12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 MAFBQ9Y5Q3 323 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 EMSYQ7Z589 1322 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 ARVCFO00192 962 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 HAS3O00219 553 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 EML1O00423 815 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 DKC1O60832 514 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 CAPN15O75808 1086 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 P4HBP07237 508 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 MARK3P27448 753 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 DNM1Q05193 864 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 SPIRE1Q08AE8 756 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 SLC39A14Q15043 492 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 STK38Q15208 465 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 PTPAQ15257 358 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 NBPF20Q3BBV1 942 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 NFRKBQ6P4R8 1299 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 TRIM50Q86XT4 487 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 CCDC60Q8IWA6 550 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 CKAP2LQ8IYA6 745 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 ERMNQ8TAM6 284 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 AFAP1L1Q8TED9 768 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 ATP6V0A1Q93050 837 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 FTOQ9C0B1 505 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 NRBP2Q9NSY0 501 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 CHMP5Q9NZZ3 219 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 LRWD1Q9UFC0 647 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 STK24Q9Y6E0 443 aa12.63□□□□□ -0.39
TRAPPC4-211ENST00000533012 VWA3AA6NCI4 1184 aa12.62□□□□□ -0.39
TRAPPC4-211ENST00000533012 QARSP47897 775 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-211ENST00000533012 NASPP49321 788 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-211ENST00000533012 CDK7P50613 346 aa12.62□□□□□ -0.39
TRAPPC4-211ENST00000533012 PSMC5P62195 406 aa12.62□□□□□ -0.39
TRAPPC4-211ENST00000533012 PTPN11Q06124 597 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-211ENST00000533012 IL17AQ16552 155 aa12.62□□□□□ -0.39
TRAPPC4-211ENST00000533012 FAM47CQ5HY64 1035 aa12.62□□□□□ -0.39
TRAPPC4-211ENST00000533012 C1orf53Q5VUE5 145 aa12.62□□□□□ -0.39
TRAPPC4-211ENST00000533012 SLC43A3Q8NBI5 491 aa12.62□□□□□ -0.39
TRAPPC4-211ENST00000533012 EIF2AK1Q9BQI3 630 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-211ENST00000533012 HTATIP2Q9BUP3 242 aa12.62□□□□□ -0.39
TRAPPC4-211ENST00000533012 RNPEPQ9H4A4 650 aa12.62□□□□□ -0.39
TRAPPC4-211ENST00000533012 GRIN2DO15399 1336 aa12.62□□□□□ -0.39
TRAPPC4-211ENST00000533012 POTEB3A0JP26 581 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 POTEMA6NI47 508 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 SLITRK3O94933 977 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 YEATS4O95619 227 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 GNAT1P11488 350 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 MARCKSP29966 332 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 KRT85P78386 507 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 PLCB4Q15147 1175 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 KRT79Q5XKE5 535 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 POTEBQ6S5H4 581 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 TRMT1LQ7Z2T5 733 aaKnown RBP12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 SESTD1Q86VW0 696 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 TPH2Q8IWU9 490 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 IGSF22Q8N9C0 903 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 LINC00301Q8NCQ3 95 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 BANK1Q8NDB2 785 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 NEK9Q8TD19 979 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 DYDC2Q96IM9 177 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 FAM167AQ96KS9 214 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 AK8Q96MA6 479 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 HSD17B14Q9BPX1 270 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 ZSWIM4Q9H7M6 989 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 RGL1Q9NZL6 768 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 HDAC6Q9UBN7 1215 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 TRPC6Q9Y210 931 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 SRPRBQ9Y5M8 271 aaKnown RBP12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 MORC2Q9Y6X9 1032 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 MROH7Q68CQ1 1323 aa12.61□□□□□ -0.39
TRAPPC4-211ENST00000533012 DDX11L8A8MPP1 907 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 DCDC2CA8MYV0 355 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 SPTLC2O15270 562 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 HBP1O60381 514 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 PPP6R2O75170 966 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 SMIM10L2AP0DMW4 78 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 SMIM10L2BP0DMW5 78 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 NCLP19338 710 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 ATP4AP20648 1035 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 LONP1P36776 959 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 CTTNQ14247 550 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 SNX17Q15036 470 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 LRRC26Q2I0M4 334 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 HAUS3Q68CZ6 603 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 OTUD6AQ7L8S5 288 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 ANKRD33Q7Z3H0 272 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 C4orf19Q8IY42 314 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 KRI1Q8N9T8 703 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 KCNG4Q8TDN1 519 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 ATP8B4Q8TF62 1192 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 BBXQ8WY36 941 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 TOX2Q96NM4 488 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 POLR3CQ9BUI4 534 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 TUFT1Q9NNX1 390 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 GTF2IRD1Q9UHL9 959 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 RCOR1Q9UKL0 485 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 ATP11BQ9Y2G3 1177 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 NRCAMQ92823 1304 aa12.6□□□□□ -0.39
TRAPPC4-211ENST00000533012 C17orf102A2RUQ5 167 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms