RNA–Protein interactions for RNA: ENST00000532377.1

LMO7-221, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-221ENST00000532377 F8W031 263 aaPredicted RBP3.93□□□□□ -1.78
LMO7-221ENST00000532377 WNT9AO14904 365 aa3.93□□□□□ -1.78
LMO7-221ENST00000532377 N4BP3O15049 544 aa3.93□□□□□ -1.78
LMO7-221ENST00000532377 KCNQ2O43526 872 aa3.93□□□□□ -1.78
LMO7-221ENST00000532377 TADA3O75528 432 aa3.93□□□□□ -1.78
LMO7-221ENST00000532377 GPR85P60893 370 aa3.93□□□□□ -1.78
LMO7-221ENST00000532377 SUMO1P63165 101 aaKnown RBP3.93□□□□□ -1.78
LMO7-221ENST00000532377 ZNF200P98182 395 aaPredicted RBP3.93□□□□□ -1.78
LMO7-221ENST00000532377 LSAMPQ13449 338 aa3.93□□□□□ -1.78
LMO7-221ENST00000532377 ZC3H12BQ5HYM0 836 aaKnown RBP3.93□□□□□ -1.78
LMO7-221ENST00000532377 EMC4Q5J8M3 183 aa3.93□□□□□ -1.78
LMO7-221ENST00000532377 MROH9Q5TGP6 573 aa3.93□□□□□ -1.78
LMO7-221ENST00000532377 ZC3H14Q6PJT7 736 aaKnown RBP3.93□□□□□ -1.78
LMO7-221ENST00000532377 ATG14Q6ZNE5 492 aa3.93□□□□□ -1.78
LMO7-221ENST00000532377 SYNPOQ8N3V7 929 aa3.93□□□□□ -1.78
LMO7-221ENST00000532377 GSTCDQ8NEC7 633 aa3.93□□□□□ -1.78
LMO7-221ENST00000532377 KCNN1Q92952 543 aa3.93□□□□□ -1.78
LMO7-221ENST00000532377 CLUHP3Q96NS8 147 aa3.93□□□□□ -1.78
LMO7-221ENST00000532377 PPP1R16BQ96T49 567 aa3.93□□□□□ -1.78
LMO7-221ENST00000532377 SMG5Q9UPR3 1016 aaKnown RBP3.93□□□□□ -1.78
LMO7-221ENST00000532377 TRAF6Q9Y4K3 522 aa3.93□□□□□ -1.78
LMO7-221ENST00000532377 QRICH2Q9H0J4 1663 aa3.93□□□□□ -1.78
LMO7-221ENST00000532377 NALCNQ8IZF0 1738 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 PLA2R1Q13018 1463 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 LMTK3Q96Q04 1460 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 DHX57Q6P158 1386 aaKnown RBP3.92□□□□□ -1.78
LMO7-221ENST00000532377 SLIT1O75093 1534 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 FAM83GA6ND36 823 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 ASGR2P07307 311 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 ATF2P15336 505 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 TMEM62Q0P6H9 643 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 PABPC4Q13310 644 aaKnown RBP eCLIP3.92□□□□□ -1.78
LMO7-221ENST00000532377 SSPNQ14714 243 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 C21orf62-AS1Q17RA5 79 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 TM4SF20Q53R12 229 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 MIB1Q86YT6 1006 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.92□□□□□ -1.78
LMO7-221ENST00000532377 SLC7A14Q8TBB6 771 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 MZB1Q8WU39 189 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.92□□□□□ -1.78
LMO7-221ENST00000532377 PTPRN2Q92932 1015 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 TMEM169Q96HH4 297 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 PKNOX2Q96KN3 472 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 PDGFDQ9GZP0 370 aaPredicted RBP3.92□□□□□ -1.78
LMO7-221ENST00000532377 BCAS3Q9H6U6 928 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 IFT57Q9NWB7 429 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 PRKAB1Q9Y478 270 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 PTPRTO14522 1441 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 ITSN1Q15811 1721 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 MYOM2P54296 1465 aa3.92□□□□□ -1.78
LMO7-221ENST00000532377 XIRP1Q702N8 1843 aaKnown RBP3.91□□□□□ -1.78
LMO7-221ENST00000532377 CCDC163A0A0D9SF12 145 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.91□□□□□ -1.78
LMO7-221ENST00000532377 ARVCFO00192 962 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 PLD2O14939 933 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 MYO1BO43795 1136 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 RFPL3O75679 317 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 ZBTB7AO95365 584 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 VIL1P09327 827 aaKnown RBP3.91□□□□□ -1.78
LMO7-221ENST00000532377 NCLP19338 710 aaKnown RBP3.91□□□□□ -1.78
LMO7-221ENST00000532377 SDSP20132 328 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 POU3F3P20264 500 aaPredicted RBP3.91□□□□□ -1.78
LMO7-221ENST00000532377 PMLP29590 882 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 RAP1GAPP47736 663 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 MASP1P48740 699 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 NCKAP1LP55160 1127 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 LINC00310P59036 64 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 GABREP78334 506 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 JAG1P78504 1218 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 RBM10P98175 930 aaKnown RBP3.91□□□□□ -1.78
LMO7-221ENST00000532377 SLC9A5Q14940 896 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 PTPROQ16827 1216 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 FNDC3BQ53EP0 1204 aaKnown RBP3.91□□□□□ -1.78
LMO7-221ENST00000532377 OLFML2BQ68BL8 750 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 MAMDC2Q7Z304 686 aaPredicted RBP3.91□□□□□ -1.78
LMO7-221ENST00000532377 FILIP1Q7Z7B0 1213 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 THNSL2Q86YJ6 484 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 DCP2Q8IU60 420 aaKnown RBP3.91□□□□□ -1.78
LMO7-221ENST00000532377 IFNL3Q8IZI9 196 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 CPA5Q8WXQ8 436 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 SEC14L1Q92503 715 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 NINJ1Q92982 152 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 TRMT2BQ96GJ1 504 aaKnown RBP3.91□□□□□ -1.78
LMO7-221ENST00000532377 PEX11GQ96HA9 241 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 SCLYQ96I15 445 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 MPHOSPH9Q99550 1183 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 SLC38A3Q99624 504 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 CDC6Q99741 560 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 JAM3Q9BX67 310 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 MRPL4Q9BYD3 311 aaKnown RBP3.91□□□□□ -1.78
LMO7-221ENST00000532377 FAM126AQ9BYI3 521 aaPredicted RBP3.91□□□□□ -1.78
LMO7-221ENST00000532377 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 RNF38Q9H0F5 515 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 SLC52A2Q9HAB3 445 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 TRIM39Q9HCM9 518 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 SIRT5Q9NXA8 310 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 BTG4Q9NY30 223 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 CLDND1Q9NY35 253 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 PLAAQ9Y263 795 aa3.91□□□□□ -1.78
LMO7-221ENST00000532377 ZNF652Q9Y2D9 606 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms