RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 RESTQ13127 1097 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 SLFN12LQ6IEE8 588 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 TAAR1Q96RJ0 339 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 EIF2AK1Q9BQI3 630 aaKnown RBP8.69□□□□□ -1.02
CTNND1-230ENST00000532245 FANCLQ9NW38 375 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 TXNDC16Q9P2K2 825 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 STK10O94804 968 aaKnown RBP8.69□□□□□ -1.02
CTNND1-230ENST00000532245 VIL1P09327 827 aaKnown RBP8.69□□□□□ -1.02
CTNND1-230ENST00000532245 USP11P51784 963 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 MFAP3P55082 362 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 CASP7P55210 303 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 PTK2Q05397 1052 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 PPP2R3AQ06190 1150 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 PPP1R21Q6ZMI0 780 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 UBL4BQ8N7F7 174 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 OR6B3Q8NGW1 331 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 SCFD2Q8WU76 684 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 P2RX5Q93086 422 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 GCNAQ96QF7 691 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 PIN4Q9Y237 131 aaKnown RBP8.69□□□□□ -1.02
CTNND1-230ENST00000532245 ROBO1Q9Y6N7 1651 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 MAPK4P31152 587 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 KRT81Q14533 505 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 PPP1R14CQ8TAE6 165 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 SEPT1Q8WYJ6 367 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 DDX12PQ92771 950 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 RBSNQ9H1K0 784 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 RGL1Q9NZL6 768 aa8.69□□□□□ -1.02
CTNND1-230ENST00000532245 ZNF233A6NK53 670 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 PP2D1A8MPX8 630 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 LRRN2O75325 713 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 MOB2Q70IA6 237 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 SFR1Q86XK3 245 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 RNF149Q8NC42 400 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 SMARCAD1Q9H4L7 1026 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 SHTN1A0MZ66 631 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 ADKP55263 362 aaKnown RBP8.68□□□□□ -1.02
CTNND1-230ENST00000532245 CUL4AQ13619 759 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 PTPROQ16827 1216 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 TRIM50Q86XT4 487 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 TMEM63CQ9P1W3 806 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 FAM205AQ6ZU69 1335 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 PAGE5Q96GU1 130 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 HEXIM2Q96MH2 286 aaKnown RBP8.68□□□□□ -1.02
CTNND1-230ENST00000532245 PSMB7Q99436 277 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 XPO4Q9C0E2 1151 aaKnown RBP8.68□□□□□ -1.02
CTNND1-230ENST00000532245 PDGFDQ9GZP0 370 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-230ENST00000532245 YWHABP31946 246 aaKnown RBP8.68□□□□□ -1.02
CTNND1-230ENST00000532245 CPT1AP50416 773 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 ITKQ08881 620 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 DGKDQ16760 1214 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 SPATA1Q5VX52 437 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 APOBEC3HQ6NTF7 200 aaKnown RBP8.68□□□□□ -1.02
CTNND1-230ENST00000532245 PCDHAC2Q9Y5I4 1007 aa8.68□□□□□ -1.02
CTNND1-230ENST00000532245 AFPP02771 609 aaKnown RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 ERCC5P28715 1186 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 NSFP46459 744 aaKnown RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 VGLL4Q14135 290 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 ZNF658Q5TYW1 1059 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 ZFPM1Q8IX07 1006 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 PIDD1Q9HB75 910 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 DDX4Q9NQI0 724 aaKnown RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 SUCLA2Q9P2R7 463 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 KIF28PB7ZC32 967 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 HERVK_113P62684 666 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 FKBP3Q00688 224 aaKnown RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 MICALL1Q8N3F8 863 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 NEK9Q8TD19 979 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 TMEM143Q96AN5 459 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 FAM213AQ9BRX8 229 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 TUBGCP2Q9BSJ2 902 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 NUCKS1Q9H1E3 243 aaKnown RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 LRRC4Q9HBW1 653 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 A0A1W2PRG0 241 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 H0YHG0 523 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 ICAM1P05362 532 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 POLR2BP30876 1174 aaKnown RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 MXI1P50539 228 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 EXOSC10Q01780 885 aaKnown RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 SURF1Q15526 300 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 THEM5Q8N1Q8 247 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 DHTKD1Q96HY7 919 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 IQCGQ9H095 443 aaKnown RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 C2orf40Q9H1Z8 148 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 KIF9Q9HAQ2 790 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 TYW5A2RUC4 315 aaKnown RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 PSMC4P43686 418 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 ZNF75DP51815 510 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 ALCAMQ13740 583 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 CCDC14Q49A88 953 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 FBXO16Q8IX29 292 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 IFT81Q8WYA0 676 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 RAD54LQ92698 747 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 MIS12Q9H081 205 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 MROH8Q9H579 483 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 RCOR1Q9UKL0 485 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 GLTPD2A6NH11 291 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 LDHAP00338 332 aaKnown RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 CASP1P29466 404 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms