RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 MYADML2A6NDP7 307 aa19.79■□□□□ 0.76
CTSB-222ENST00000531551 ATG7O95352 703 aa19.79■□□□□ 0.76
CTSB-222ENST00000531551 P4HBP07237 508 aaKnown RBP19.79■□□□□ 0.76
CTSB-222ENST00000531551 GJA9P57773 515 aa19.79■□□□□ 0.76
CTSB-222ENST00000531551 FSCN1Q16658 493 aaKnown RBP19.79■□□□□ 0.76
CTSB-222ENST00000531551 POTEBQ6S5H4 581 aa19.79■□□□□ 0.76
CTSB-222ENST00000531551 CATSPER3Q86XQ3 398 aa19.79■□□□□ 0.76
CTSB-222ENST00000531551 CCDC60Q8IWA6 550 aaPredicted RBP19.79■□□□□ 0.76
CTSB-222ENST00000531551 DEFB118Q96PH6 123 aa19.79■□□□□ 0.76
CTSB-222ENST00000531551 MCOLN1Q9GZU1 580 aa19.79■□□□□ 0.76
CTSB-222ENST00000531551 ZNF302Q9NR11 478 aa19.79■□□□□ 0.76
CTSB-222ENST00000531551 SLITRK3O94933 977 aa19.79■□□□□ 0.76
CTSB-222ENST00000531551 PFKFB1P16118 471 aa19.79■□□□□ 0.76
CTSB-222ENST00000531551 DGKDQ16760 1214 aa19.79■□□□□ 0.76
CTSB-222ENST00000531551 GNASQ5JWF2 1037 aa19.79■□□□□ 0.76
CTSB-222ENST00000531551 ZNF333Q96JL9 665 aa19.79■□□□□ 0.76
CTSB-222ENST00000531551 HSD17B14Q9BPX1 270 aa19.79■□□□□ 0.76
CTSB-222ENST00000531551 LXNQ9BS40 222 aa19.79■□□□□ 0.76
CTSB-222ENST00000531551 CCDC39Q9UFE4 941 aa19.79■□□□□ 0.76
CTSB-222ENST00000531551 DOCK5Q9H7D0 1870 aa19.78■□□□□ 0.76
CTSB-222ENST00000531551 A0A087WWV3 80 aa19.78■□□□□ 0.76
CTSB-222ENST00000531551 A6NJR5 290 aa19.78■□□□□ 0.76
CTSB-222ENST00000531551 MYL3P08590 195 aa19.78■□□□□ 0.76
CTSB-222ENST00000531551 RPA1P27694 616 aa19.78■□□□□ 0.76
CTSB-222ENST00000531551 QARSP47897 775 aaKnown RBP19.78■□□□□ 0.76
CTSB-222ENST00000531551 STAT5BP51692 787 aa19.78■□□□□ 0.76
CTSB-222ENST00000531551 CHMP4BP1P59074 171 aa19.78■□□□□ 0.76
CTSB-222ENST00000531551 UGCGQ16739 394 aa19.78■□□□□ 0.76
CTSB-222ENST00000531551 FAM160B1Q5W0V3 765 aa19.78■□□□□ 0.76
CTSB-222ENST00000531551 LHX8Q68G74 356 aa19.78■□□□□ 0.76
CTSB-222ENST00000531551 TRIM50Q86XT4 487 aa19.78■□□□□ 0.76
CTSB-222ENST00000531551 CKAP2LQ8IYA6 745 aa19.78■□□□□ 0.76
CTSB-222ENST00000531551 NEK9Q8TD19 979 aa19.78■□□□□ 0.76
CTSB-222ENST00000531551 CCSER1Q9C0I3 900 aa19.78■□□□□ 0.76
CTSB-222ENST00000531551 GOLPH3LQ9H4A5 285 aa19.78■□□□□ 0.76
CTSB-222ENST00000531551 KIAA1024Q9UPX6 916 aa19.78■□□□□ 0.76
CTSB-222ENST00000531551 DDX11L8A8MPP1 907 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 PPFIA4O75335 1185 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 ZNF286BP0CG31 522 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 SPATA31C1P0DKV0 1188 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 MARK3P27448 753 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 NDUFA8P51970 172 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 ECM1Q16610 540 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 PDXDC2PQ6P474 469 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 POTEGQ6S5H5 508 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 CCDC73Q6ZRK6 1079 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 ATP6V0A1Q93050 837 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 PCYT2Q99447 389 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 POLR3CQ9BUI4 534 aaPredicted RBP19.77■□□□□ 0.76
CTSB-222ENST00000531551 TUFT1Q9NNX1 390 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 DDX19AQ9NUU7 478 aaKnown RBP19.77■□□□□ 0.76
CTSB-222ENST00000531551 KCNH3Q9ULD8 1083 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 POLR2DO15514 142 aaKnown RBP19.77■□□□□ 0.76
CTSB-222ENST00000531551 ADAMTS4O75173 837 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 LGALS2P05162 132 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 PSMC5P62195 406 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 RNF180Q86T96 592 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 ARMC5Q96C12 935 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 ZSWIM4Q9H7M6 989 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 PAK6Q9NQU5 681 aaPredicted RBP19.77■□□□□ 0.76
CTSB-222ENST00000531551 WRAP73Q9P2S5 460 aaPredicted RBP19.77■□□□□ 0.76
CTSB-222ENST00000531551 KDM3AQ9Y4C1 1321 aa19.77■□□□□ 0.76
CTSB-222ENST00000531551 CTAGE5O15320 804 aa19.76■□□□□ 0.75
CTSB-222ENST00000531551 GRB10Q13322 594 aa19.76■□□□□ 0.75
CTSB-222ENST00000531551 RRAGBQ5VZM2 374 aa19.76■□□□□ 0.75
CTSB-222ENST00000531551 DHX58Q96C10 678 aa19.76■□□□□ 0.75
CTSB-222ENST00000531551 PNMA5Q96PV4 448 aa19.76■□□□□ 0.75
CTSB-222ENST00000531551 NT5C3AQ9H0P0 336 aa19.76■□□□□ 0.75
CTSB-222ENST00000531551 UPF3AQ9H1J1 476 aaKnown RBP19.76■□□□□ 0.75
CTSB-222ENST00000531551 SMARCAD1Q9H4L7 1026 aa19.76■□□□□ 0.75
CTSB-222ENST00000531551 A0A087X0B3 334 aa19.75■□□□□ 0.75
CTSB-222ENST00000531551 IGKV6D-21A0A0A0MT36 114 aa19.75■□□□□ 0.75
CTSB-222ENST00000531551 ZEB2O60315 1214 aa19.75■□□□□ 0.75
CTSB-222ENST00000531551 LIG1P18858 919 aa19.75■□□□□ 0.75
CTSB-222ENST00000531551 PLCG1P19174 1290 aa19.75■□□□□ 0.75
CTSB-222ENST00000531551 SYKP43405 635 aa19.75■□□□□ 0.75
CTSB-222ENST00000531551 DKC1O60832 514 aaKnown RBP eCLIP19.75■□□□□ 0.754e-14■■■■■ 34
CTSB-222ENST00000531551 LGR5O75473 907 aa19.75■□□□□ 0.75
CTSB-222ENST00000531551 STAT6P42226 847 aa19.75■□□□□ 0.75
CTSB-222ENST00000531551 PIGOQ8TEQ8 1089 aa19.75■□□□□ 0.75
CTSB-222ENST00000531551 HPSEQ9Y251 543 aa19.75■□□□□ 0.75
CTSB-222ENST00000531551 MAFBQ9Y5Q3 323 aaPredicted RBP19.75■□□□□ 0.75
CTSB-222ENST00000531551 EMSYQ7Z589 1322 aa19.74■□□□□ 0.75
CTSB-222ENST00000531551 IGSF9BQ9UPX0 1349 aa19.74■□□□□ 0.75
CTSB-222ENST00000531551 E9PMD0 336 aa19.74■□□□□ 0.75
CTSB-222ENST00000531551 ZBTB39O15060 712 aa19.74■□□□□ 0.75
CTSB-222ENST00000531551 PRKCEQ02156 737 aa19.74■□□□□ 0.75
CTSB-222ENST00000531551 LRRC41Q15345 812 aa19.74■□□□□ 0.75
CTSB-222ENST00000531551 NFKBIBQ15653 356 aa19.74■□□□□ 0.75
CTSB-222ENST00000531551 KCNA10Q16322 511 aa19.74■□□□□ 0.75
CTSB-222ENST00000531551 PLPPR4Q7Z2D5 763 aa19.74■□□□□ 0.75
CTSB-222ENST00000531551 AFAP1L1Q8TED9 768 aa19.74■□□□□ 0.75
CTSB-222ENST00000531551 ZNF215Q9UL58 517 aaPredicted RBP19.74■□□□□ 0.75
CTSB-222ENST00000531551 DNM3Q9UQ16 869 aa19.74■□□□□ 0.75
CTSB-222ENST00000531551 H3BRB1 525 aa19.73■□□□□ 0.75
CTSB-222ENST00000531551 ZNF862O60290 1169 aa19.73■□□□□ 0.75
CTSB-222ENST00000531551 PSMC6P62333 389 aa19.73■□□□□ 0.75
CTSB-222ENST00000531551 DHX8Q14562 1220 aaKnown RBP19.73■□□□□ 0.75
CTSB-222ENST00000531551 CXCL17Q6UXB2 119 aa19.73■□□□□ 0.75
CTSB-222ENST00000531551 IQUBQ8NA54 791 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms