RNA–Protein interactions for RNA: ENST00000530785.5

LTBP3-217, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-217ENST00000530785 SHROOM1Q2M3G4 852 aaPredicted RBP21.03■□□□□ 0.96
LTBP3-217ENST00000530785 SLC24A3Q9HC58 644 aa21.03■□□□□ 0.96
LTBP3-217ENST00000530785 GDF3Q9NR23 364 aa21.03■□□□□ 0.96
LTBP3-217ENST00000530785 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.03■□□□□ 0.96
LTBP3-217ENST00000530785 ZNF646O15015 1829 aaPredicted RBP21.03■□□□□ 0.96
LTBP3-217ENST00000530785 POTEMA6NI47 508 aa21.02■□□□□ 0.96
LTBP3-217ENST00000530785 TACC1O75410 805 aa21.02■□□□□ 0.96
LTBP3-217ENST00000530785 FCER1AP12319 257 aa21.02■□□□□ 0.96
LTBP3-217ENST00000530785 CLK2P49760 499 aaKnown RBP21.02■□□□□ 0.96
LTBP3-217ENST00000530785 IFFO1Q0D2I5 559 aa21.02■□□□□ 0.96
LTBP3-217ENST00000530785 GRIK3Q13003 919 aa21.02■□□□□ 0.96
LTBP3-217ENST00000530785 ANKRD20A8PQ5CZ79 823 aa21.02■□□□□ 0.96
LTBP3-217ENST00000530785 CCDC47Q96A33 483 aaKnown RBP21.02■□□□□ 0.96
LTBP3-217ENST00000530785 DHTKD1Q96HY7 919 aaPredicted RBP21.02■□□□□ 0.96
LTBP3-217ENST00000530785 DUSP9Q99956 384 aaKnown RBP21.02■□□□□ 0.96
LTBP3-217ENST00000530785 HYOU1Q9Y4L1 999 aa21.02■□□□□ 0.96
LTBP3-217ENST00000530785 ZBTB5O15062 677 aa21.02■□□□□ 0.96
LTBP3-217ENST00000530785 ECM2O94769 699 aaPredicted RBP21.02■□□□□ 0.96
LTBP3-217ENST00000530785 MATR3P43243 847 aaKnown RBP eCLIP21.02■□□□□ 0.96
LTBP3-217ENST00000530785 SLC8A3P57103 927 aa21.02■□□□□ 0.96
LTBP3-217ENST00000530785 TMEM266Q2M3C6 531 aa21.02■□□□□ 0.96
LTBP3-217ENST00000530785 C8orf74Q6P047 294 aa21.02■□□□□ 0.96
LTBP3-217ENST00000530785 C2CD5Q86YS7 1000 aa21.02■□□□□ 0.96
LTBP3-217ENST00000530785 CCDC17Q96LX7 622 aa21.02■□□□□ 0.96
LTBP3-217ENST00000530785 BLOC1S4Q9NUP1 217 aa21.02■□□□□ 0.96
LTBP3-217ENST00000530785 ZNHIT6Q9NWK9 470 aaKnown RBP21.02■□□□□ 0.96
LTBP3-217ENST00000530785 CAPN6Q9Y6Q1 641 aa21.02■□□□□ 0.96
LTBP3-217ENST00000530785 DDTLA6NHG4 134 aaPredicted RBP21.01■□□□□ 0.95
LTBP3-217ENST00000530785 IBSPP21815 317 aaPredicted RBP21.01■□□□□ 0.95
LTBP3-217ENST00000530785 CDK17Q00537 523 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 AMPD3Q01432 767 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 SPRED3Q2MJR0 410 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 TAX1BP1Q86VP1 789 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 IFT20Q8IY31 132 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 CUL5Q93034 780 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 MTMR8Q96EF0 704 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 PNMA5Q96PV4 448 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 HAUS2Q9NVX0 235 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 FAM153BP0C7A2 387 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 CYP27A1Q02318 531 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 XRCC4Q13426 336 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 FAM153CQ494X1 144 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 LACTB2Q53H82 288 aaPredicted RBP21.01■□□□□ 0.95
LTBP3-217ENST00000530785 DACT2Q5SW24 774 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 CSGALNACT2Q8N6G5 542 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 MAB21L3Q8N8X9 362 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 P2RX5Q93086 422 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 EEF2KMTQ96G04 330 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 AGPAT5Q9NUQ2 364 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 FAM198AQ9UFP1 575 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 FAM153AQ9UHL3 310 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 SLX4Q8IY92 1834 aa21.01■□□□□ 0.95
LTBP3-217ENST00000530785 MYH7BA7E2Y1 1941 aa21■□□□□ 0.95
LTBP3-217ENST00000530785 ZNF263O14978 683 aa21■□□□□ 0.95
LTBP3-217ENST00000530785 ECE2O60344 883 aa21■□□□□ 0.95
LTBP3-217ENST00000530785 CCNE1P24864 410 aa21■□□□□ 0.95
LTBP3-217ENST00000530785 RBM5P52756 815 aaKnown RBP eCLIP21■□□□□ 0.95
LTBP3-217ENST00000530785 ZKSCAN8Q15776 578 aaPredicted RBP21■□□□□ 0.95
LTBP3-217ENST00000530785 STRIP1Q5VSL9 837 aa21■□□□□ 0.95
LTBP3-217ENST00000530785 SMCR8Q8TEV9 937 aaPredicted RBP21■□□□□ 0.95
LTBP3-217ENST00000530785 HPS3Q969F9 1004 aa21■□□□□ 0.95
LTBP3-217ENST00000530785 SCLT1Q96NL6 688 aa21■□□□□ 0.95
LTBP3-217ENST00000530785 SH2D4AQ9H788 454 aa21■□□□□ 0.95
LTBP3-217ENST00000530785 ZNF219Q9P2Y4 722 aaPredicted RBP21■□□□□ 0.95
LTBP3-217ENST00000530785 RASSF10A6NK89 507 aa21■□□□□ 0.95
LTBP3-217ENST00000530785 ZBED6P86452 979 aa21■□□□□ 0.95
LTBP3-217ENST00000530785 TBC1D8BQ0IIM8 1120 aa21■□□□□ 0.95
LTBP3-217ENST00000530785 PAK2Q13177 524 aa21■□□□□ 0.95
LTBP3-217ENST00000530785 NFRKBQ6P4R8 1299 aa21■□□□□ 0.95
LTBP3-217ENST00000530785 RETREG2Q8NC44 543 aa21■□□□□ 0.95
LTBP3-217ENST00000530785 KIAA0895Q8NCT3 520 aa21■□□□□ 0.95
LTBP3-217ENST00000530785 MAGEC2Q9UBF1 373 aaPredicted RBP21■□□□□ 0.95
LTBP3-217ENST00000530785 STK17AQ9UEE5 414 aa21■□□□□ 0.95
LTBP3-217ENST00000530785 PES1O00541 588 aaKnown RBP20.99■□□□□ 0.95
LTBP3-217ENST00000530785 RAD21O60216 631 aa20.99■□□□□ 0.95
LTBP3-217ENST00000530785 MGRN1O60291 552 aa20.99■□□□□ 0.95
LTBP3-217ENST00000530785 CARSP49589 748 aaKnown RBP20.99■□□□□ 0.95
LTBP3-217ENST00000530785 DNM2P50570 870 aa20.99■□□□□ 0.95
LTBP3-217ENST00000530785 ANKRD40Q6AI12 368 aa20.99■□□□□ 0.95
LTBP3-217ENST00000530785 SV2BQ7L1I2 683 aa20.99■□□□□ 0.95
LTBP3-217ENST00000530785 SH3BP5LQ7L8J4 393 aa20.99■□□□□ 0.95
LTBP3-217ENST00000530785 NOC3LQ8WTT2 800 aaKnown RBP20.99■□□□□ 0.95
LTBP3-217ENST00000530785 LARP4BQ92615 738 aaKnown RBP20.99■□□□□ 0.95
LTBP3-217ENST00000530785 NUP58Q9BVL2 599 aa20.99■□□□□ 0.95
LTBP3-217ENST00000530785 DHX36Q9H2U1 1008 aaKnown RBP20.99■□□□□ 0.95
LTBP3-217ENST00000530785 RBM12Q9NTZ6 932 aaKnown RBP20.99■□□□□ 0.95
LTBP3-217ENST00000530785 SMARCAL1Q9NZC9 954 aa20.99■□□□□ 0.95
LTBP3-217ENST00000530785 UTRNP46939 3433 aa20.99■□□□□ 0.95
LTBP3-217ENST00000530785 MYMKA6NI61 221 aa20.99■□□□□ 0.95
LTBP3-217ENST00000530785 EEF2P13639 858 aaKnown RBP20.99■□□□□ 0.95
LTBP3-217ENST00000530785 E2F5Q15329 346 aa20.99■□□□□ 0.95
LTBP3-217ENST00000530785 CCDC181Q5TID7 509 aa20.99■□□□□ 0.95
LTBP3-217ENST00000530785 CDK5RAP3Q96JB5 506 aa20.99■□□□□ 0.95
LTBP3-217ENST00000530785 NUDT12Q9BQG2 462 aa20.99■□□□□ 0.95
LTBP3-217ENST00000530785 RAB34Q9BZG1 259 aa20.99■□□□□ 0.95
LTBP3-217ENST00000530785 NFU1Q9UMS0 254 aa20.99■□□□□ 0.95
LTBP3-217ENST00000530785 BICDL2A1A5D9 508 aa20.98■□□□□ 0.95
LTBP3-217ENST00000530785 GMNCA6NCL1 334 aa20.98■□□□□ 0.95
LTBP3-217ENST00000530785 SSBP05455 408 aaKnown RBP eCLIP20.98■□□□□ 0.95
LTBP3-217ENST00000530785 GLI1P08151 1106 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms