RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 SMAP1Q8IYB5 467 aaPredicted RBP19.34■□□□□ 0.69
CCS-205ENST00000530384 WNT8BQ93098 351 aa19.34■□□□□ 0.69
CCS-205ENST00000530384 VWCEQ96DN2 955 aa19.34■□□□□ 0.69
CCS-205ENST00000530384 LLPHQ9BRT6 129 aaKnown RBP19.34■□□□□ 0.69
CCS-205ENST00000530384 FTOQ9C0B1 505 aaKnown RBP eCLIP19.34■□□□□ 0.69
CCS-205ENST00000530384 GJB4Q9NTQ9 266 aa19.34■□□□□ 0.69
CCS-205ENST00000530384 MYH9P35579 1960 aaKnown RBP19.33■□□□□ 0.69
CCS-205ENST00000530384 TET1Q8NFU7 2136 aa19.33■□□□□ 0.69
CCS-205ENST00000530384 RRN3P2A6NIE6 340 aa19.33■□□□□ 0.68
CCS-205ENST00000530384 BACH1O14867 736 aa19.33■□□□□ 0.68
CCS-205ENST00000530384 MSH4O15457 936 aa19.33■□□□□ 0.68
CCS-205ENST00000530384 ST18O60284 1047 aa19.33■□□□□ 0.68
CCS-205ENST00000530384 JAK2O60674 1132 aa19.33■□□□□ 0.68
CCS-205ENST00000530384 KRT2P35908 639 aa19.33■□□□□ 0.68
CCS-205ENST00000530384 THPOP40225 353 aa19.33■□□□□ 0.68
CCS-205ENST00000530384 TRIM29Q14134 588 aa19.33■□□□□ 0.68
CCS-205ENST00000530384 GRIK4Q16099 956 aa19.33■□□□□ 0.68
CCS-205ENST00000530384 ZNF618Q5T7W0 954 aa19.33■□□□□ 0.68
CCS-205ENST00000530384 TAF2Q6P1X5 1199 aa19.33■□□□□ 0.68
CCS-205ENST00000530384 CCDC83Q8IWF9 413 aa19.33■□□□□ 0.68
CCS-205ENST00000530384 UIMC1Q96RL1 719 aa19.33■□□□□ 0.68
CCS-205ENST00000530384 RIT2Q99578 217 aa19.33■□□□□ 0.68
CCS-205ENST00000530384 TRPC6Q9Y210 931 aa19.33■□□□□ 0.68
CCS-205ENST00000530384 LAMA3Q16787 3333 aa19.33■□□□□ 0.68
CCS-205ENST00000530384 TDP2O95551 362 aa19.32■□□□□ 0.68
CCS-205ENST00000530384 PLCB4Q15147 1175 aa19.32■□□□□ 0.68
CCS-205ENST00000530384 NEK8Q86SG6 692 aa19.32■□□□□ 0.68
CCS-205ENST00000530384 SLC5A5Q92911 643 aa19.32■□□□□ 0.68
CCS-205ENST00000530384 MBOAT7Q96N66 472 aa19.32■□□□□ 0.68
CCS-205ENST00000530384 NAP1L4Q99733 375 aaKnown RBP19.32■□□□□ 0.68
CCS-205ENST00000530384 ZNF302Q9NR11 478 aa19.32■□□□□ 0.68
CCS-205ENST00000530384 CXXC1Q9P0U4 656 aaPredicted RBP19.32■□□□□ 0.68
CCS-205ENST00000530384 TUBE1Q9UJT0 475 aa19.32■□□□□ 0.68
CCS-205ENST00000530384 PCDHA10Q9Y5I2 948 aa19.32■□□□□ 0.68
CCS-205ENST00000530384 SLC4A7Q9Y6M7 1214 aa19.32■□□□□ 0.68
CCS-205ENST00000530384 POTEB3A0JP26 581 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 MBLAC1A4D2B0 266 aaPredicted RBP19.31■□□□□ 0.68
CCS-205ENST00000530384 ZBBXA8MT70 800 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 RSPH10B2B2RC85 870 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 GAS7O60861 476 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 CXCL10P02778 98 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 MMP1P03956 469 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 PSAPP07602 524 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 RSPH10BP0C881 870 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 INSRRP14616 1297 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 GCFC2P16383 781 aaKnown RBP19.31■□□□□ 0.68
CCS-205ENST00000530384 HMGN5P82970 282 aaKnown RBP19.31■□□□□ 0.68
CCS-205ENST00000530384 LETM2Q2VYF4 491 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 ZNF697Q5TEC3 545 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 LRCH2Q5VUJ6 765 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 TRAF7Q6Q0C0 670 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 POTEBQ6S5H4 581 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 PIK3AP1Q6ZUJ8 805 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 CCDC60Q8IWA6 550 aaPredicted RBP19.31■□□□□ 0.68
CCS-205ENST00000530384 DEFB123Q8N688 67 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 OXER1Q8TDS5 423 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 TEKT3Q9BXF9 490 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 DDX25Q9UHL0 483 aaKnown RBP19.31■□□□□ 0.68
CCS-205ENST00000530384 WDR81Q562E7 1941 aa19.31■□□□□ 0.68
CCS-205ENST00000530384 TMEM265A0A087WTH1 108 aa19.3■□□□□ 0.68
CCS-205ENST00000530384 WDR64B1ANS9 1081 aa19.3■□□□□ 0.68
CCS-205ENST00000530384 NBNO60934 754 aa19.3■□□□□ 0.68
CCS-205ENST00000530384 BAIAP3O94812 1187 aa19.3■□□□□ 0.68
CCS-205ENST00000530384 RPLP2P05387 115 aaKnown RBP19.3■□□□□ 0.68
CCS-205ENST00000530384 GPNMBQ14956 572 aa19.3■□□□□ 0.68
CCS-205ENST00000530384 KRT40Q6A162 431 aa19.3■□□□□ 0.68
CCS-205ENST00000530384 PPP4R3AQ6IN85 833 aa19.3■□□□□ 0.68
CCS-205ENST00000530384 SWSAP1Q6NVH7 229 aa19.3■□□□□ 0.68
CCS-205ENST00000530384 PDXDC2PQ6P474 469 aa19.3■□□□□ 0.68
CCS-205ENST00000530384 RPAINQ86UA6 219 aa19.3■□□□□ 0.68
CCS-205ENST00000530384 RSPH3Q86UC2 560 aa19.3■□□□□ 0.68
CCS-205ENST00000530384 TBC1D32Q96NH3 1257 aa19.3■□□□□ 0.68
CCS-205ENST00000530384 SAMM50Q9Y512 469 aa19.3■□□□□ 0.68
CCS-205ENST00000530384 HBP1O60381 514 aa19.29■□□□□ 0.68
CCS-205ENST00000530384 SFNP31947 248 aa19.29■□□□□ 0.68
CCS-205ENST00000530384 JAK3P52333 1124 aa19.29■□□□□ 0.68
CCS-205ENST00000530384 IGBP1P78318 339 aa19.29■□□□□ 0.68
CCS-205ENST00000530384 NR5A1Q13285 461 aa19.29■□□□□ 0.68
CCS-205ENST00000530384 MARCH8Q5T0T0 291 aa19.29■□□□□ 0.68
CCS-205ENST00000530384 CNKSR3Q6P9H4 555 aa19.29■□□□□ 0.68
CCS-205ENST00000530384 ATP8B4Q8TF62 1192 aa19.29■□□□□ 0.68
CCS-205ENST00000530384 DISC1Q9NRI5 854 aa19.29■□□□□ 0.68
CCS-205ENST00000530384 MAFBQ9Y5Q3 323 aaPredicted RBP19.29■□□□□ 0.68
CCS-205ENST00000530384 PSMD10O75832 226 aa19.28■□□□□ 0.68
CCS-205ENST00000530384 DNAJB2P25686 324 aa19.28■□□□□ 0.68
CCS-205ENST00000530384 RAB30Q15771 203 aa19.28■□□□□ 0.68
CCS-205ENST00000530384 Q7L0L9 218 aa19.28■□□□□ 0.68
CCS-205ENST00000530384 DIS3L2Q8IYB7 885 aaKnown RBP19.28■□□□□ 0.68
CCS-205ENST00000530384 RDM1Q8NG50 284 aa19.28■□□□□ 0.68
CCS-205ENST00000530384 ETNPPLQ8TBG4 499 aa19.28■□□□□ 0.68
CCS-205ENST00000530384 TNFRSF25Q93038 417 aa19.28■□□□□ 0.68
CCS-205ENST00000530384 COL1A2P08123 1366 aa19.28■□□□□ 0.68
CCS-205ENST00000530384 SLC37A4O43826 429 aa19.27■□□□□ 0.68
CCS-205ENST00000530384 CCNT1O60563 726 aaKnown RBP19.27■□□□□ 0.68
CCS-205ENST00000530384 EFCAB14O75071 495 aa19.27■□□□□ 0.68
CCS-205ENST00000530384 CTSHP09668 335 aa19.27■□□□□ 0.68
CCS-205ENST00000530384 ATP2A2P16615 1042 aaKnown RBP19.27■□□□□ 0.68
CCS-205ENST00000530384 FOSBP53539 338 aa19.27■□□□□ 0.68
CCS-205ENST00000530384 MBTPS1Q14703 1052 aa19.27■□□□□ 0.68
CCS-205ENST00000530384 SAFBQ15424 915 aaKnown RBP eCLIP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms