RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 MARCH8Q5T0T0 291 aa18.25■□□□□ 0.51
TSPAN4-218ENST00000529566 TRAF7Q6Q0C0 670 aa18.25■□□□□ 0.51
TSPAN4-218ENST00000529566 CCDC60Q8IWA6 550 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-218ENST00000529566 SMAP1Q8IYB5 467 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-218ENST00000529566 CAGE1Q8TC20 777 aa18.25■□□□□ 0.51
TSPAN4-218ENST00000529566 LMBR1Q8WVP7 490 aa18.25■□□□□ 0.51
TSPAN4-218ENST00000529566 ATP6V0A1Q93050 837 aa18.25■□□□□ 0.51
TSPAN4-218ENST00000529566 SCLYQ96I15 445 aa18.25■□□□□ 0.51
TSPAN4-218ENST00000529566 AZI2Q9H6S1 392 aa18.25■□□□□ 0.51
TSPAN4-218ENST00000529566 NRCAMQ92823 1304 aa18.24■□□□□ 0.51
TSPAN4-218ENST00000529566 CCNT1O60563 726 aaKnown RBP18.24■□□□□ 0.51
TSPAN4-218ENST00000529566 CKBP12277 381 aa18.24■□□□□ 0.51
TSPAN4-218ENST00000529566 ATP4AP20648 1035 aa18.24■□□□□ 0.51
TSPAN4-218ENST00000529566 FXR1P51114 621 aaKnown RBP eCLIP18.24■□□□□ 0.51
TSPAN4-218ENST00000529566 BFSP2Q13515 415 aa18.24■□□□□ 0.51
TSPAN4-218ENST00000529566 LRIT3Q3SXY7 679 aa18.24■□□□□ 0.51
TSPAN4-218ENST00000529566 TMEM240Q5SV17 173 aa18.24■□□□□ 0.51
TSPAN4-218ENST00000529566 LRCH2Q5VUJ6 765 aa18.24■□□□□ 0.51
TSPAN4-218ENST00000529566 SWSAP1Q6NVH7 229 aa18.24■□□□□ 0.51
TSPAN4-218ENST00000529566 MIS18BP1Q6P0N0 1132 aa18.24■□□□□ 0.51
TSPAN4-218ENST00000529566 FAM184AQ8NB25 1140 aa18.24■□□□□ 0.51
TSPAN4-218ENST00000529566 HAS1Q92839 578 aa18.24■□□□□ 0.51
TSPAN4-218ENST00000529566 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.24■□□□□ 0.512e-12■□□□□ 9.2
TSPAN4-218ENST00000529566 UNC45AQ9H3U1 944 aa18.24■□□□□ 0.51
TSPAN4-218ENST00000529566 IL23AQ9NPF7 189 aa18.24■□□□□ 0.51
TSPAN4-218ENST00000529566 PCDHA10Q9Y5I2 948 aa18.24■□□□□ 0.51
TSPAN4-218ENST00000529566 MAFBQ9Y5Q3 323 aaPredicted RBP18.24■□□□□ 0.51
TSPAN4-218ENST00000529566 MBLAC1A4D2B0 266 aaPredicted RBP18.23■□□□□ 0.51
TSPAN4-218ENST00000529566 SOX1O00570 391 aaPredicted RBP18.23■□□□□ 0.51
TSPAN4-218ENST00000529566 GAS7O60861 476 aa18.23■□□□□ 0.51
TSPAN4-218ENST00000529566 ACRP10323 421 aa18.23■□□□□ 0.51
TSPAN4-218ENST00000529566 INSRRP14616 1297 aa18.23■□□□□ 0.51
TSPAN4-218ENST00000529566 SLC26A2P50443 739 aa18.23■□□□□ 0.51
TSPAN4-218ENST00000529566 PPFIA1Q13136 1202 aa18.23■□□□□ 0.51
TSPAN4-218ENST00000529566 CUL4AQ13619 759 aa18.23■□□□□ 0.51
TSPAN4-218ENST00000529566 RETREG2Q8NC44 543 aa18.23■□□□□ 0.51
TSPAN4-218ENST00000529566 NAP1L4Q99733 375 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-218ENST00000529566 TEKT3Q9BXF9 490 aa18.23■□□□□ 0.51
TSPAN4-218ENST00000529566 FOXP1Q9H334 677 aaPredicted RBP18.23■□□□□ 0.51
TSPAN4-218ENST00000529566 ZNF302Q9NR11 478 aa18.23■□□□□ 0.51
TSPAN4-218ENST00000529566 WDR64B1ANS9 1081 aa18.22■□□□□ 0.51
TSPAN4-218ENST00000529566 PSAPP07602 524 aa18.22■□□□□ 0.51
TSPAN4-218ENST00000529566 GNAT1P11488 350 aa18.22■□□□□ 0.51
TSPAN4-218ENST00000529566 SELPP16109 830 aa18.22■□□□□ 0.51
TSPAN4-218ENST00000529566 SAFBQ15424 915 aaKnown RBP eCLIP18.22■□□□□ 0.51
TSPAN4-218ENST00000529566 GRIK4Q16099 956 aa18.22■□□□□ 0.51
TSPAN4-218ENST00000529566 RASIP1Q5U651 963 aa18.22■□□□□ 0.51
TSPAN4-218ENST00000529566 ZNF365Q70YC5 407 aa18.22■□□□□ 0.51
TSPAN4-218ENST00000529566 CCDC155Q8N6L0 562 aa18.22■□□□□ 0.51
TSPAN4-218ENST00000529566 FAM20AQ96MK3 541 aa18.22■□□□□ 0.51
TSPAN4-218ENST00000529566 DISC1Q9NRI5 854 aa18.22■□□□□ 0.51
TSPAN4-218ENST00000529566 VAV3Q9UKW4 847 aa18.22■□□□□ 0.51
TSPAN4-218ENST00000529566 SZT2Q5T011 3432 aa18.22■□□□□ 0.51
TSPAN4-218ENST00000529566 POTEB3A0JP26 581 aa18.21■□□□□ 0.51
TSPAN4-218ENST00000529566 ZBTB42B2RXF5 422 aa18.21■□□□□ 0.51
TSPAN4-218ENST00000529566 KIF28PB7ZC32 967 aa18.21■□□□□ 0.51
TSPAN4-218ENST00000529566 RBAK-RBAKDNI3L0D1 243 aa18.21■□□□□ 0.51
TSPAN4-218ENST00000529566 BACH1O14867 736 aa18.21■□□□□ 0.51
TSPAN4-218ENST00000529566 TBX3O15119 743 aa18.21■□□□□ 0.51
TSPAN4-218ENST00000529566 U2AF2P26368 475 aaKnown RBP eCLIP18.21■□□□□ 0.51
TSPAN4-218ENST00000529566 GJB2P29033 226 aa18.21■□□□□ 0.51
TSPAN4-218ENST00000529566 RFC2P35250 354 aa18.21■□□□□ 0.51
TSPAN4-218ENST00000529566 ZNF618Q5T7W0 954 aa18.21■□□□□ 0.51
TSPAN4-218ENST00000529566 FAM160B1Q5W0V3 765 aa18.21■□□□□ 0.51
TSPAN4-218ENST00000529566 PDXDC2PQ6P474 469 aa18.21■□□□□ 0.51
TSPAN4-218ENST00000529566 POTEBQ6S5H4 581 aa18.21■□□□□ 0.51
TSPAN4-218ENST00000529566 RUFY4Q6ZNE9 571 aa18.21■□□□□ 0.51
TSPAN4-218ENST00000529566 POTEDQ86YR6 584 aa18.21■□□□□ 0.51
TSPAN4-218ENST00000529566 ATP8B4Q8TF62 1192 aa18.21■□□□□ 0.51
TSPAN4-218ENST00000529566 IGSF9BQ9UPX0 1349 aa18.21■□□□□ 0.51
TSPAN4-218ENST00000529566 SCN5AQ14524 2016 aa18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 RRN3P2A6NIE6 340 aa18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 CHMP2AO43633 222 aa18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 ZNF862O60290 1169 aa18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 SFNP31947 248 aa18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 JAK3P52333 1124 aa18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 PPP2R5CQ13362 524 aa18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 MBTPS1Q14703 1052 aa18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 LRRC8DQ7L1W4 858 aa18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 RPAINQ86UA6 219 aa18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 NOSTRINQ8IVI9 506 aa18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 RPUSD2Q8IZ73 545 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 RDM1Q8NG50 284 aa18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 TRAPPC12Q8WVT3 735 aa18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 ZBTB10Q96DT7 871 aa18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 GABBR1Q9UBS5 961 aa18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 TRPC6Q9Y210 931 aa18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 KAT6AQ92794 2004 aa18.2■□□□□ 0.5
TSPAN4-218ENST00000529566 EML1O00423 815 aa18.19■□□□□ 0.5
TSPAN4-218ENST00000529566 NBNO60934 754 aa18.19■□□□□ 0.5
TSPAN4-218ENST00000529566 CXCL10P02778 98 aa18.19■□□□□ 0.5
TSPAN4-218ENST00000529566 THPOP40225 353 aa18.19■□□□□ 0.5
TSPAN4-218ENST00000529566 SPIRE1Q08AE8 756 aa18.19■□□□□ 0.5
TSPAN4-218ENST00000529566 UGCGQ16739 394 aa18.19■□□□□ 0.5
TSPAN4-218ENST00000529566 PSRC1Q6PGN9 363 aaPredicted RBP18.19■□□□□ 0.5
TSPAN4-218ENST00000529566 DEFB128Q7Z7B8 93 aa18.19■□□□□ 0.5
TSPAN4-218ENST00000529566 HERVK_113Q902F9 699 aa18.19■□□□□ 0.5
TSPAN4-218ENST00000529566 RNPC3Q96LT9 517 aaKnown RBP18.19■□□□□ 0.5
TSPAN4-218ENST00000529566 MTMR9Q96QG7 549 aa18.19■□□□□ 0.5
TSPAN4-218ENST00000529566 TUBE1Q9UJT0 475 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms