RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 TRADDQ15628 312 aa19.47■□□□□ 0.71
LTBP3-210ENST00000528516 A0A1W2PQC6 194 aa19.47■□□□□ 0.71
LTBP3-210ENST00000528516 ARHGEF35A5YM69 484 aa19.47■□□□□ 0.71
LTBP3-210ENST00000528516 ATP6V1G2O95670 118 aa19.47■□□□□ 0.71
LTBP3-210ENST00000528516 XRCC5P13010 732 aaKnown RBP19.47■□□□□ 0.71
LTBP3-210ENST00000528516 CASKIN2Q8WXE0 1202 aa19.47■□□□□ 0.71
LTBP3-210ENST00000528516 STK36Q9NRP7 1315 aa19.47■□□□□ 0.71
LTBP3-210ENST00000528516 SGMS1Q86VZ5 419 aa19.46■□□□□ 0.71
LTBP3-210ENST00000528516 IQCKQ8N0W5 287 aa19.46■□□□□ 0.71
LTBP3-210ENST00000528516 GGT7Q9UJ14 662 aa19.46■□□□□ 0.71
LTBP3-210ENST00000528516 SCAF8Q9UPN6 1271 aaKnown RBP19.46■□□□□ 0.71
LTBP3-210ENST00000528516 AP1G2O75843 785 aa19.46■□□□□ 0.71
LTBP3-210ENST00000528516 ANP32DO95626 131 aa19.46■□□□□ 0.71
LTBP3-210ENST00000528516 PMS1P54277 932 aaKnown RBP19.46■□□□□ 0.71
LTBP3-210ENST00000528516 SPRED3Q2MJR0 410 aa19.46■□□□□ 0.71
LTBP3-210ENST00000528516 TTC16Q8NEE8 873 aa19.46■□□□□ 0.71
LTBP3-210ENST00000528516 TAOK3Q9H2K8 898 aa19.46■□□□□ 0.71
LTBP3-210ENST00000528516 SWAP70Q9UH65 585 aa19.46■□□□□ 0.71
LTBP3-210ENST00000528516 GINS2Q9Y248 185 aa19.46■□□□□ 0.71
LTBP3-210ENST00000528516 PPP2R2AP63151 447 aa19.46■□□□□ 0.71
LTBP3-210ENST00000528516 MKRN4PQ13434 485 aaPredicted RBP19.46■□□□□ 0.71
LTBP3-210ENST00000528516 EARS2Q5JPH6 523 aaKnown RBP19.46■□□□□ 0.71
LTBP3-210ENST00000528516 DDX42Q86XP3 938 aaKnown RBP eCLIP19.46■□□□□ 0.71
LTBP3-210ENST00000528516 AP1M1Q9BXS5 423 aa19.46■□□□□ 0.71
LTBP3-210ENST00000528516 ERVV-1B6SEH8 477 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 TDP2O95551 362 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 POTEJP0CG39 1038 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 CETN2P41208 172 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 IFNAR2P48551 515 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 GFPT1Q06210 699 aaPredicted RBP19.45■□□□□ 0.7
LTBP3-210ENST00000528516 ITGB3BPQ13352 177 aaPredicted RBP19.45■□□□□ 0.7
LTBP3-210ENST00000528516 CEP95Q96GE4 821 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 PDE4DIPQ5VU43 2346 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 SLFN13Q68D06 897 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 MDM1Q8TC05 714 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 RAPGEF5Q92565 580 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 PCIF1Q9H4Z3 704 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 MYBL1P10243 752 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 PIGOQ8TEQ8 1089 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 PARD3BQ8TEW8 1205 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 HOOK2Q96ED9 719 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 NOP53Q9NZM5 478 aaKnown RBP19.45■□□□□ 0.7
LTBP3-210ENST00000528516 CD2APQ9Y5K6 639 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 FAM43BQ6ZT52 329 aaPredicted RBP19.45■□□□□ 0.7
LTBP3-210ENST00000528516 CCDC155Q8N6L0 562 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 SPDYE1Q8NFV5 336 aaPredicted RBP19.45■□□□□ 0.7
LTBP3-210ENST00000528516 RUBCNQ92622 972 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 TMEM60Q9H2L4 133 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 IRAK4Q9NWZ3 460 aa19.45■□□□□ 0.7
LTBP3-210ENST00000528516 KRIT1O00522 736 aa19.44■□□□□ 0.7
LTBP3-210ENST00000528516 TRIM37O94972 964 aa19.44■□□□□ 0.7
LTBP3-210ENST00000528516 NDST4Q9H3R1 872 aa19.44■□□□□ 0.7
LTBP3-210ENST00000528516 MYH15Q9Y2K3 1946 aa19.44■□□□□ 0.7
LTBP3-210ENST00000528516 E9PMD0 336 aa19.44■□□□□ 0.7
LTBP3-210ENST00000528516 GNPTABQ3T906 1256 aa19.44■□□□□ 0.7
LTBP3-210ENST00000528516 CERKLQ49MI3 558 aaPredicted RBP19.44■□□□□ 0.7
LTBP3-210ENST00000528516 SH3RF1Q7Z6J0 888 aa19.44■□□□□ 0.7
LTBP3-210ENST00000528516 RETREG2Q8NC44 543 aa19.44■□□□□ 0.7
LTBP3-210ENST00000528516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.44■□□□□ 0.7
LTBP3-210ENST00000528516 PALMO75781 387 aa19.44■□□□□ 0.7
LTBP3-210ENST00000528516 SRGNP10124 158 aa19.44■□□□□ 0.7
LTBP3-210ENST00000528516 FAM228AQ86W67 206 aa19.44■□□□□ 0.7
LTBP3-210ENST00000528516 KCNV2Q8TDN2 545 aa19.44■□□□□ 0.7
LTBP3-210ENST00000528516 ELAC2Q9BQ52 826 aaKnown RBP19.44■□□□□ 0.7
LTBP3-210ENST00000528516 BSDC1Q9NW68 430 aaPredicted RBP19.44■□□□□ 0.7
LTBP3-210ENST00000528516 EME2A4GXA9 379 aaPredicted RBP19.43■□□□□ 0.7
LTBP3-210ENST00000528516 VEGFAP15692 232 aaPredicted RBP19.43■□□□□ 0.7
LTBP3-210ENST00000528516 ELF3P78545 371 aaPredicted RBP19.43■□□□□ 0.7
LTBP3-210ENST00000528516 TEKT1Q969V4 418 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 MXD3Q9BW11 206 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 THAP9Q9H5L6 903 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 SERPINB13Q9UIV8 391 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 RAD51CO43502 376 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 CCNE1P24864 410 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 EVX2Q03828 476 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 ICA1Q05084 483 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 HOOK3Q86VS8 718 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 DDX12PQ92771 950 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 SYNCQ9H7C4 482 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 TSKSQ9UJT2 592 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 GAS7O60861 476 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 MIGA2Q7L4E1 593 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 ADGRA1Q86SQ6 560 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 CNKSR2Q8WXI2 1034 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 TMBIM4Q9HC24 238 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 BATF3Q9NR55 127 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 DNAJC17Q9NVM6 304 aaKnown RBP19.43■□□□□ 0.7
LTBP3-210ENST00000528516 TRPC6Q9Y210 931 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 STRCQ7RTU9 1775 aa19.43■□□□□ 0.7
LTBP3-210ENST00000528516 CSF1RP07333 972 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 HSD17B3P37058 310 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 STAT3P40763 770 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 SLC8A3P57103 927 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 NFIXQ14938 502 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 TAF1DQ9H5J8 278 aaPredicted RBP19.42■□□□□ 0.7
LTBP3-210ENST00000528516 GJA3Q9Y6H8 435 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 PDS5AQ29RF7 1337 aaKnown RBP19.42■□□□□ 0.7
LTBP3-210ENST00000528516 ALS2Q96Q42 1657 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 SERPINB2P05120 415 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 STK4Q13043 487 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms