RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.01■□□□□ 0.15
CAPN1-214ENST00000528165 ATP8A1Q9Y2Q0 1164 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 ADAMTS2O95450 1211 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 GSTA1P08263 222 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 ITGA4P13612 1032 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 MECOMQ03112 1051 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 KCTD19Q17RG1 926 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-214ENST00000528165 PEX26Q7Z412 305 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 PNMA8AQ86V59 439 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-214ENST00000528165 LRRC57Q8N9N7 239 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 PNMA2Q9UL42 364 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 SLIT2O94813 1529 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 NHSL1Q5SYE7 1610 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 MYH7BA7E2Y1 1941 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 RTN2O75298 545 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 GNA14O95837 355 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 MMEP08473 750 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 CLTAP09496 248 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 PTK2Q05397 1052 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 SOGA3Q5TF21 947 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 CRELD2Q6UXH1 353 aaPredicted RBP16■□□□□ 0.15
CAPN1-214ENST00000528165 CEP63Q96MT8 703 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 KANSL2Q9H9L4 492 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 SLC12A4Q9UP95 1085 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 MYO1EQ12965 1108 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 CALCRLQ16602 461 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 ZCWPW2Q504Y3 356 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 STAMBPL1Q96FJ0 436 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 FMO2Q99518 471 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 SELENOSQ9BQE4 189 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 RAB34Q9BZG1 259 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 SLC24A3Q9HC58 644 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 SAMD15Q9P1V8 674 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 COL5A2P05997 1499 aaPredicted RBP16■□□□□ 0.15
CAPN1-214ENST00000528165 SHANK3Q9BYB0 1731 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 WTIPA6NIX2 430 aaPredicted RBP16■□□□□ 0.15
CAPN1-214ENST00000528165 CAND2O75155 1236 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 GOLGA8HP0CJ92 632 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 CHN1P15882 459 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 ITIH4Q14624 930 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 TRIM59Q8IWR1 403 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 SNX29Q8TEQ0 813 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 NSMCE1Q8WV22 266 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 LMBR1Q8WVP7 490 aa16■□□□□ 0.15
CAPN1-214ENST00000528165 ZNF317Q96PQ6 595 aaPredicted RBP16■□□□□ 0.15
CAPN1-214ENST00000528165 CELF4Q9BZC1 486 aaKnown RBP16■□□□□ 0.15
CAPN1-214ENST00000528165 MYH4Q9Y623 1939 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 ASAP2O43150 1006 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 ORC2Q13416 577 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-214ENST00000528165 UBE4AQ14139 1066 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 KRT79Q5XKE5 535 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 MAB21L3Q8N8X9 362 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 SPAG5Q96R06 1193 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 LZTS2Q9BRK4 669 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 TRIM31Q9BZY9 425 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 EBF2Q9HAK2 575 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 MKNK2Q9HBH9 465 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 LRRC4CQ9HCJ2 640 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 USP17L3A6NCW0 530 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 USP17L4A6NCW7 530 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 CFAP73A6NFT4 308 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 KLRF2D3W0D1 207 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 PPFIA2O75334 1257 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 USP17L8P0C7I0 530 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 CALRP27797 417 aaKnown RBP15.99■□□□□ 0.15
CAPN1-214ENST00000528165 SF3A3Q12874 501 aaKnown RBP eCLIP15.99■□□□□ 0.155e-11■■■■■ 28
CAPN1-214ENST00000528165 COASYQ13057 564 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 RIPK1Q13546 671 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 ALKBH5Q6P6C2 394 aaKnown RBP15.99■□□□□ 0.15
CAPN1-214ENST00000528165 USP17L1Q7RTZ2 530 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 ZNF571Q7Z3V5 609 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-214ENST00000528165 TBC1D1Q86TI0 1168 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-214ENST00000528165 TPCN2Q8NHX9 752 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 CCHCR1Q8TD31 782 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 SEC14L1Q92503 715 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 GANQ9H2C0 597 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 STX8Q9UNK0 236 aa15.99■□□□□ 0.15
CAPN1-214ENST00000528165 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.98■□□□□ 0.15
CAPN1-214ENST00000528165 PALM3A6NDB9 673 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-214ENST00000528165 FXR2P51116 673 aaKnown RBP eCLIP15.98■□□□□ 0.151e-6■■■■□ 20.3
CAPN1-214ENST00000528165 SPDYCQ5MJ68 293 aa15.98■□□□□ 0.15
CAPN1-214ENST00000528165 FAM26FQ5R3K3 315 aa15.98■□□□□ 0.15
CAPN1-214ENST00000528165 RASGEF1CQ8N431 466 aa15.98■□□□□ 0.15
CAPN1-214ENST00000528165 THOC1Q96FV9 657 aaKnown RBP15.98■□□□□ 0.15
CAPN1-214ENST00000528165 BATF3Q9NR55 127 aa15.98■□□□□ 0.15
CAPN1-214ENST00000528165 BIN2Q9UBW5 565 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-214ENST00000528165 NAGPAQ9UK23 515 aa15.98■□□□□ 0.15
CAPN1-214ENST00000528165 BZW2Q9Y6E2 419 aaKnown RBP15.98■□□□□ 0.15
CAPN1-214ENST00000528165 POTEMA6NI47 508 aa15.98■□□□□ 0.15
CAPN1-214ENST00000528165 TSPY3P0CV98 308 aa15.98■□□□□ 0.15
CAPN1-214ENST00000528165 TSPY8P0CW00 308 aa15.98■□□□□ 0.15
CAPN1-214ENST00000528165 EVA1CP58658 441 aa15.98■□□□□ 0.15
CAPN1-214ENST00000528165 REXO1Q8N1G1 1221 aaKnown RBP15.98■□□□□ 0.15
CAPN1-214ENST00000528165 FAM84BQ96KN1 310 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-214ENST00000528165 MTMR9Q96QG7 549 aa15.98■□□□□ 0.15
CAPN1-214ENST00000528165 RAB17Q9H0T7 212 aa15.98■□□□□ 0.15
CAPN1-214ENST00000528165 CPVLQ9H3G5 476 aa15.98■□□□□ 0.15
CAPN1-214ENST00000528165 GOPCQ9HD26 462 aa15.98■□□□□ 0.15
CAPN1-214ENST00000528165 CCDC88AQ3V6T2 1871 aa15.97■□□□□ 0.15
CAPN1-214ENST00000528165 LAMB1P07942 1786 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms