RNA–Protein interactions for RNA: ENST00000527066.5

CAPN5-203, Transcript of calpain 5, humanhuman

TSL 4

Gene CAPN5, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-203ENST00000527066 TRIM50Q86XT4 487 aa17.14■□□□□ 0.33
CAPN5-203ENST00000527066 CCDC60Q8IWA6 550 aaPredicted RBP17.14■□□□□ 0.33
CAPN5-203ENST00000527066 ERMNQ8TAM6 284 aa17.14■□□□□ 0.33
CAPN5-203ENST00000527066 ATP6V0A1Q93050 837 aa17.14■□□□□ 0.33
CAPN5-203ENST00000527066 USP28Q96RU2 1077 aa17.14■□□□□ 0.33
CAPN5-203ENST00000527066 TUT1Q9H6E5 874 aaKnown RBP17.14■□□□□ 0.33
CAPN5-203ENST00000527066 STK24Q9Y6E0 443 aa17.14■□□□□ 0.33
CAPN5-203ENST00000527066 POTEMA6NI47 508 aa17.13■□□□□ 0.33
CAPN5-203ENST00000527066 HAS3O00219 553 aa17.13■□□□□ 0.33
CAPN5-203ENST00000527066 DKC1O60832 514 aaKnown RBP eCLIP17.13■□□□□ 0.33
CAPN5-203ENST00000527066 YEATS4O95619 227 aa17.13■□□□□ 0.33
CAPN5-203ENST00000527066 TECP42680 631 aa17.13■□□□□ 0.33
CAPN5-203ENST00000527066 PTPN11Q06124 597 aaPredicted RBP17.13■□□□□ 0.33
CAPN5-203ENST00000527066 ITGA7Q13683 1181 aa17.13■□□□□ 0.33
CAPN5-203ENST00000527066 EPHA7Q15375 998 aa17.13■□□□□ 0.33
CAPN5-203ENST00000527066 KIAA0753Q2KHM9 967 aa17.13■□□□□ 0.33
CAPN5-203ENST00000527066 HAUS3Q68CZ6 603 aa17.13■□□□□ 0.33
CAPN5-203ENST00000527066 SLC39A5Q6ZMH5 540 aa17.13■□□□□ 0.33
CAPN5-203ENST00000527066 SESTD1Q86VW0 696 aa17.13■□□□□ 0.33
CAPN5-203ENST00000527066 TNPO1Q92973 898 aaKnown RBP17.13■□□□□ 0.33
CAPN5-203ENST00000527066 PCYT2Q99447 389 aa17.13■□□□□ 0.33
CAPN5-203ENST00000527066 HTATIP2Q9BUP3 242 aa17.13■□□□□ 0.33
CAPN5-203ENST00000527066 FTOQ9C0B1 505 aaKnown RBP eCLIP17.13■□□□□ 0.33
CAPN5-203ENST00000527066 CFAP45Q9UL16 551 aa17.13■□□□□ 0.33
CAPN5-203ENST00000527066 CLIC4Q9Y696 253 aa17.13■□□□□ 0.33
CAPN5-203ENST00000527066 EML1O00423 815 aa17.12■□□□□ 0.33
CAPN5-203ENST00000527066 P4HBP07237 508 aaKnown RBP17.12■□□□□ 0.33
CAPN5-203ENST00000527066 PSMC6P62333 389 aa17.12■□□□□ 0.33
CAPN5-203ENST00000527066 PDIA5Q14554 519 aa17.12■□□□□ 0.33
CAPN5-203ENST00000527066 PTPAQ15257 358 aa17.12■□□□□ 0.33
CAPN5-203ENST00000527066 SWSAP1Q6NVH7 229 aa17.12■□□□□ 0.33
CAPN5-203ENST00000527066 PDXDC2PQ6P474 469 aa17.12■□□□□ 0.33
CAPN5-203ENST00000527066 C7orf31Q8N865 590 aa17.12■□□□□ 0.33
CAPN5-203ENST00000527066 IGSF22Q8N9C0 903 aa17.12■□□□□ 0.33
CAPN5-203ENST00000527066 SLC43A3Q8NBI5 491 aa17.12■□□□□ 0.33
CAPN5-203ENST00000527066 FAM167AQ96KS9 214 aa17.12■□□□□ 0.33
CAPN5-203ENST00000527066 GABBR1Q9UBS5 961 aa17.12■□□□□ 0.33
CAPN5-203ENST00000527066 MAFBQ9Y5Q3 323 aaPredicted RBP17.12■□□□□ 0.33
CAPN5-203ENST00000527066 VWA3AA6NCI4 1184 aa17.11■□□□□ 0.33
CAPN5-203ENST00000527066 ARVCFO00192 962 aa17.11■□□□□ 0.33
CAPN5-203ENST00000527066 MARK3P27448 753 aa17.11■□□□□ 0.33
CAPN5-203ENST00000527066 PSMC5P62195 406 aa17.11■□□□□ 0.33
CAPN5-203ENST00000527066 KRT85P78386 507 aa17.11■□□□□ 0.33
CAPN5-203ENST00000527066 CEBPZQ03701 1054 aaKnown RBP17.11■□□□□ 0.33
CAPN5-203ENST00000527066 SLC39A14Q15043 492 aa17.11■□□□□ 0.33
CAPN5-203ENST00000527066 STK38Q15208 465 aa17.11■□□□□ 0.33
CAPN5-203ENST00000527066 NBPF20Q3BBV1 942 aa17.11■□□□□ 0.33
CAPN5-203ENST00000527066 AK8Q96MA6 479 aa17.11■□□□□ 0.33
CAPN5-203ENST00000527066 LRWD1Q9UFC0 647 aa17.11■□□□□ 0.33
CAPN5-203ENST00000527066 LONP1P36776 959 aaKnown RBP17.1■□□□□ 0.33
CAPN5-203ENST00000527066 QARSP47897 775 aaKnown RBP17.1■□□□□ 0.33
CAPN5-203ENST00000527066 ATN1P54259 1190 aaPredicted RBP17.1■□□□□ 0.33
CAPN5-203ENST00000527066 CHMP4BP1P59074 171 aa17.1■□□□□ 0.33
CAPN5-203ENST00000527066 PRKCEQ02156 737 aa17.1■□□□□ 0.33
CAPN5-203ENST00000527066 DNM1Q05193 864 aaKnown RBP17.1■□□□□ 0.33
CAPN5-203ENST00000527066 FAM47CQ5HY64 1035 aa17.1■□□□□ 0.33
CAPN5-203ENST00000527066 ANKRD33Q7Z3H0 272 aa17.1■□□□□ 0.33
CAPN5-203ENST00000527066 CKAP2LQ8IYA6 745 aa17.1■□□□□ 0.33
CAPN5-203ENST00000527066 LINC00301Q8NCQ3 95 aa17.1■□□□□ 0.33
CAPN5-203ENST00000527066 BANK1Q8NDB2 785 aa17.1■□□□□ 0.33
CAPN5-203ENST00000527066 KCNG4Q8TDN1 519 aa17.1■□□□□ 0.33
CAPN5-203ENST00000527066 ATP8B4Q8TF62 1192 aa17.1■□□□□ 0.33
CAPN5-203ENST00000527066 BBXQ8WY36 941 aaPredicted RBP17.1■□□□□ 0.33
CAPN5-203ENST00000527066 EIF2AK1Q9BQI3 630 aaKnown RBP17.1■□□□□ 0.33
CAPN5-203ENST00000527066 LXNQ9BS40 222 aa17.1■□□□□ 0.33
CAPN5-203ENST00000527066 CHMP5Q9NZZ3 219 aa17.1■□□□□ 0.33
CAPN5-203ENST00000527066 TRPC6Q9Y210 931 aa17.1■□□□□ 0.33
CAPN5-203ENST00000527066 COL1A2P08123 1366 aa17.1■□□□□ 0.33
CAPN5-203ENST00000527066 POTEB3A0JP26 581 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 SPTLC2O15270 562 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 TLR3O15455 904 aaKnown RBP17.09■□□□□ 0.33
CAPN5-203ENST00000527066 PPP6R2O75170 966 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 OATP04181 439 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 SMIM10L2AP0DMW4 78 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 SMIM10L2BP0DMW5 78 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 MUTP22033 750 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 HOXC8P31273 242 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 CDK7P50613 346 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 RTP1P59025 263 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 UGCGQ16739 394 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 LRRC26Q2I0M4 334 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 FOXD4L6Q3SYB3 417 aaPredicted RBP17.09■□□□□ 0.33
CAPN5-203ENST00000527066 POTEBQ6S5H4 581 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 FOXD4L3Q6VB84 417 aaPredicted RBP17.09■□□□□ 0.33
CAPN5-203ENST00000527066 TOX2Q96NM4 488 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 RNPEPQ9H4A4 650 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 ZSWIM4Q9H7M6 989 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 TUFT1Q9NNX1 390 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 GTF2IRD1Q9UHL9 959 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 SRPRBQ9Y5M8 271 aaKnown RBP17.09■□□□□ 0.33
CAPN5-203ENST00000527066 GRIN2DO15399 1336 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 NRCAMQ92823 1304 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 TANC1Q9C0D5 1861 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 TRIP12Q14669 1992 aaPredicted RBP17.09■□□□□ 0.33
CAPN5-203ENST00000527066 DNAH12Q6ZR08 3092 aa17.09■□□□□ 0.33
CAPN5-203ENST00000527066 KDM3AQ9Y4C1 1321 aa17.08■□□□□ 0.32
CAPN5-203ENST00000527066 HBP1O60381 514 aa17.08■□□□□ 0.32
CAPN5-203ENST00000527066 CAPN15O75808 1086 aa17.08■□□□□ 0.32
CAPN5-203ENST00000527066 GNAT1P11488 350 aa17.08■□□□□ 0.32
CAPN5-203ENST00000527066 NCLP19338 710 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms