RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 KCNH2Q12809 1159 aa22.45■■□□□ 1.18
SMIM3-201ENST00000526627 SFR1Q86XK3 245 aa22.45■■□□□ 1.18
SMIM3-201ENST00000526627 AENQ8WTP8 325 aaKnown RBP22.45■■□□□ 1.18
SMIM3-201ENST00000526627 GDAP1L1Q96MZ0 367 aa22.45■■□□□ 1.18
SMIM3-201ENST00000526627 SELENOOQ9BVL4 669 aa22.45■■□□□ 1.18
SMIM3-201ENST00000526627 DMGDHQ9UI17 866 aaKnown RBP22.45■■□□□ 1.18
SMIM3-201ENST00000526627 CETN3O15182 167 aa22.44■■□□□ 1.18
SMIM3-201ENST00000526627 MSH4O15457 936 aa22.44■■□□□ 1.18
SMIM3-201ENST00000526627 PHACTR2O75167 634 aa22.44■■□□□ 1.18
SMIM3-201ENST00000526627 HSP90B2PQ58FF3 399 aa22.44■■□□□ 1.18
SMIM3-201ENST00000526627 ERMNQ8TAM6 284 aa22.44■■□□□ 1.18
SMIM3-201ENST00000526627 FAM20AQ96MK3 541 aa22.44■■□□□ 1.18
SMIM3-201ENST00000526627 TRIM34Q9BYJ4 488 aa22.44■■□□□ 1.18
SMIM3-201ENST00000526627 DNM3Q9UQ16 869 aa22.44■■□□□ 1.18
SMIM3-201ENST00000526627 PRPF6O94906 941 aaKnown RBP22.43■■□□□ 1.18
SMIM3-201ENST00000526627 FOSP01100 380 aaPredicted RBP22.43■■□□□ 1.18
SMIM3-201ENST00000526627 HSPA1LP34931 641 aa22.43■■□□□ 1.18
SMIM3-201ENST00000526627 BTNL9Q6UXG8 535 aa22.43■■□□□ 1.18
SMIM3-201ENST00000526627 CYP2W1Q8TAV3 490 aa22.43■■□□□ 1.18
SMIM3-201ENST00000526627 TBC1D5Q92609 795 aa22.43■■□□□ 1.18
SMIM3-201ENST00000526627 HINFPQ9BQA5 517 aa22.43■■□□□ 1.18
SMIM3-201ENST00000526627 SERPINA10Q9UK55 444 aa22.43■■□□□ 1.18
SMIM3-201ENST00000526627 NAB2Q15742 525 aa22.43■■□□□ 1.18
SMIM3-201ENST00000526627 SLC18A3Q16572 532 aa22.43■■□□□ 1.18
SMIM3-201ENST00000526627 KNOP1Q1ED39 458 aaKnown RBP22.43■■□□□ 1.18
SMIM3-201ENST00000526627 MUM1L1Q5H9M0 696 aa22.43■■□□□ 1.18
SMIM3-201ENST00000526627 BCAS3Q9H6U6 928 aa22.43■■□□□ 1.18
SMIM3-201ENST00000526627 ATRNL1Q5VV63 1379 aa22.43■■□□□ 1.18
SMIM3-201ENST00000526627 A0A087X0T9 212 aa22.42■■□□□ 1.18
SMIM3-201ENST00000526627 A0A1W2PRG0 241 aa22.42■■□□□ 1.18
SMIM3-201ENST00000526627 SPDYE3A6NKU9 549 aa22.42■■□□□ 1.18
SMIM3-201ENST00000526627 FAM228BP0C875 321 aa22.42■■□□□ 1.18
SMIM3-201ENST00000526627 MYBP10242 640 aa22.42■■□□□ 1.18
SMIM3-201ENST00000526627 HOXA13P31271 388 aaPredicted RBP22.42■■□□□ 1.18
SMIM3-201ENST00000526627 RAPGEF1Q13905 1077 aa22.42■■□□□ 1.18
SMIM3-201ENST00000526627 HDAC9Q9UKV0 1011 aa22.42■■□□□ 1.18
SMIM3-201ENST00000526627 SMCHD1A6NHR9 2005 aa22.42■■□□□ 1.18
SMIM3-201ENST00000526627 RSPH10B2B2RC85 870 aa22.42■■□□□ 1.18
SMIM3-201ENST00000526627 GH2P01242 217 aa22.42■■□□□ 1.18
SMIM3-201ENST00000526627 RSPH10BP0C881 870 aa22.42■■□□□ 1.18
SMIM3-201ENST00000526627 BMP3P12645 472 aa22.42■■□□□ 1.18
SMIM3-201ENST00000526627 KLRC1P26715 233 aa22.42■■□□□ 1.18
SMIM3-201ENST00000526627 FRMD5Q7Z6J6 570 aa22.42■■□□□ 1.18
SMIM3-201ENST00000526627 FAM133AQ8N9E0 248 aa22.42■■□□□ 1.18
SMIM3-201ENST00000526627 TDRD3Q9H7E2 651 aaKnown RBP22.42■■□□□ 1.18
SMIM3-201ENST00000526627 SLX4Q8IY92 1834 aa22.42■■□□□ 1.18
SMIM3-201ENST00000526627 AGPSO00116 658 aa22.41■■□□□ 1.18
SMIM3-201ENST00000526627 EML1O00423 815 aa22.41■■□□□ 1.18
SMIM3-201ENST00000526627 ACTN1P12814 892 aa22.41■■□□□ 1.18
SMIM3-201ENST00000526627 MRPS25P82663 173 aaKnown RBP22.41■■□□□ 1.18
SMIM3-201ENST00000526627 RUBCNQ92622 972 aa22.41■■□□□ 1.18
SMIM3-201ENST00000526627 RUSC1Q9BVN2 902 aa22.41■■□□□ 1.18
SMIM3-201ENST00000526627 RNF40O75150 1001 aa22.41■■□□□ 1.18
SMIM3-201ENST00000526627 CYP3A4P08684 503 aa22.41■■□□□ 1.18
SMIM3-201ENST00000526627 ARID5AQ03989 594 aa22.41■■□□□ 1.18
SMIM3-201ENST00000526627 PALMO75781 387 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 SLC9A1P19634 815 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 CYP4A11Q02928 519 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 KLHL30Q0D2K2 578 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 IKQ13123 557 aaPredicted RBP22.4■■□□□ 1.18
SMIM3-201ENST00000526627 ASIC2Q16515 512 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 ZSCAN26Q16670 478 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 BMT2Q1RMZ1 405 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 CCDC70Q6NSX1 233 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 MS4A14Q96JA4 679 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 PACSIN1Q9BY11 444 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 PDXKO00764 312 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 MATR3P43243 847 aaKnown RBP eCLIP22.4■■□□□ 1.18
SMIM3-201ENST00000526627 SLC7A5Q01650 507 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 MSL1Q68DK7 614 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 IRF2BP2Q7Z5L9 587 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 RIN2Q8WYP3 895 aaPredicted RBP22.4■■□□□ 1.18
SMIM3-201ENST00000526627 POLR3CQ9BUI4 534 aaPredicted RBP22.4■■□□□ 1.18
SMIM3-201ENST00000526627 FAM204AQ9H8W3 233 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 PLCB1Q9NQ66 1216 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 RBM12Q9NTZ6 932 aaKnown RBP22.4■■□□□ 1.18
SMIM3-201ENST00000526627 ARMCX3Q9UH62 379 aaPredicted RBP22.4■■□□□ 1.18
SMIM3-201ENST00000526627 ADAMTS1Q9UHI8 967 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 TSKSQ9UJT2 592 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 PRR12Q9ULL5 1215 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 PCDHGC5Q9Y5F6 944 aa22.4■■□□□ 1.18
SMIM3-201ENST00000526627 IGLV3-22A0A075B6J6 115 aa22.39■■□□□ 1.17
SMIM3-201ENST00000526627 PIK3CDO00329 1044 aa22.39■■□□□ 1.17
SMIM3-201ENST00000526627 AKAP3O75969 853 aa22.39■■□□□ 1.17
SMIM3-201ENST00000526627 POLD1P28340 1107 aa22.39■■□□□ 1.17
SMIM3-201ENST00000526627 CCDC181Q5TID7 509 aa22.39■■□□□ 1.17
SMIM3-201ENST00000526627 EIF2AK1Q9BQI3 630 aaKnown RBP22.39■■□□□ 1.17
SMIM3-201ENST00000526627 BHMT2Q9H2M3 363 aa22.39■■□□□ 1.17
SMIM3-201ENST00000526627 STK24Q9Y6E0 443 aa22.39■■□□□ 1.17
SMIM3-201ENST00000526627 ASTN1O14525 1302 aa22.39■■□□□ 1.17
SMIM3-201ENST00000526627 ENTPD3O75355 529 aa22.39■■□□□ 1.17
SMIM3-201ENST00000526627 ACTN2P35609 894 aa22.39■■□□□ 1.17
SMIM3-201ENST00000526627 GGCXP38435 758 aa22.39■■□□□ 1.17
SMIM3-201ENST00000526627 EPS15P42566 896 aa22.39■■□□□ 1.17
SMIM3-201ENST00000526627 NAP1L1P55209 391 aaKnown RBP22.39■■□□□ 1.17
SMIM3-201ENST00000526627 RBM26Q5T8P6 1007 aaKnown RBP22.39■■□□□ 1.17
SMIM3-201ENST00000526627 GOLGA5Q8TBA6 731 aa22.39■■□□□ 1.17
SMIM3-201ENST00000526627 POLD4Q9HCU8 107 aa22.39■■□□□ 1.17
SMIM3-201ENST00000526627 RGL1Q9NZL6 768 aa22.39■■□□□ 1.17
SMIM3-201ENST00000526627 KIF13BQ9NQT8 1826 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms