RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 CTDNEP1O95476 244 aa13.9□□□□□ -0.18
CHKA-203ENST00000525155 THPOP40225 353 aa13.9□□□□□ -0.18
CHKA-203ENST00000525155 KCNQ1P51787 676 aa13.9□□□□□ -0.18
CHKA-203ENST00000525155 NLRP5P59047 1200 aa13.9□□□□□ -0.18
CHKA-203ENST00000525155 TRIM29Q14134 588 aa13.9□□□□□ -0.18
CHKA-203ENST00000525155 FAM117BQ6P1L5 589 aa13.9□□□□□ -0.18
CHKA-203ENST00000525155 XRRA1Q6P2D8 792 aa13.9□□□□□ -0.18
CHKA-203ENST00000525155 METTL7BQ6UX53 244 aa13.9□□□□□ -0.18
CHKA-203ENST00000525155 HSCBQ8IWL3 235 aa13.9□□□□□ -0.18
CHKA-203ENST00000525155 FAM184AQ8NB25 1140 aa13.9□□□□□ -0.18
CHKA-203ENST00000525155 ADAMTS19Q8TE59 1207 aa13.9□□□□□ -0.18
CHKA-203ENST00000525155 GBF1Q92538 1859 aa13.9□□□□□ -0.18
CHKA-203ENST00000525155 C17orf102A2RUQ5 167 aa13.89□□□□□ -0.19
CHKA-203ENST00000525155 LINC01553A4QN01 128 aa13.89□□□□□ -0.19
CHKA-203ENST00000525155 RSPH10B2B2RC85 870 aa13.89□□□□□ -0.19
CHKA-203ENST00000525155 KIF28PB7ZC32 967 aa13.89□□□□□ -0.19
CHKA-203ENST00000525155 RSPH10BP0C881 870 aa13.89□□□□□ -0.19
CHKA-203ENST00000525155 KCNA2P16389 499 aa13.89□□□□□ -0.19
CHKA-203ENST00000525155 ITGB5P18084 799 aa13.89□□□□□ -0.19
CHKA-203ENST00000525155 AP3B2Q13367 1082 aa13.89□□□□□ -0.19
CHKA-203ENST00000525155 PLEKHG4Q58EX7 1191 aa13.89□□□□□ -0.19
CHKA-203ENST00000525155 PCNX4Q63HM2 1172 aa13.89□□□□□ -0.19
CHKA-203ENST00000525155 TYW1BQ6NUM6 668 aa13.89□□□□□ -0.19
CHKA-203ENST00000525155 CCDC155Q8N6L0 562 aa13.89□□□□□ -0.19
CHKA-203ENST00000525155 ATP6V0A1Q93050 837 aa13.89□□□□□ -0.19
CHKA-203ENST00000525155 RAD9AQ99638 391 aa13.89□□□□□ -0.19
CHKA-203ENST00000525155 BRMS1Q9HCU9 246 aa13.89□□□□□ -0.19
CHKA-203ENST00000525155 KIAA1217Q5T5P2 1943 aa13.88□□□□□ -0.19
CHKA-203ENST00000525155 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.88□□□□□ -0.19
CHKA-203ENST00000525155 GSTTP1A0A1W2PQM5 241 aa13.88□□□□□ -0.19
CHKA-203ENST00000525155 K7ELQ4 463 aaPredicted RBP13.88□□□□□ -0.19
CHKA-203ENST00000525155 FIBPO43427 364 aa13.88□□□□□ -0.19
CHKA-203ENST00000525155 STAM2O75886 525 aa13.88□□□□□ -0.19
CHKA-203ENST00000525155 PARNO95453 639 aaKnown RBP13.88□□□□□ -0.19
CHKA-203ENST00000525155 KCNJ6P48051 423 aa13.88□□□□□ -0.19
CHKA-203ENST00000525155 ERVK-21P61565 698 aa13.88□□□□□ -0.19
CHKA-203ENST00000525155 IKBKEQ14164 716 aa13.88□□□□□ -0.19
CHKA-203ENST00000525155 NEDD9Q14511 834 aa13.88□□□□□ -0.19
CHKA-203ENST00000525155 UBE2SQ16763 222 aa13.88□□□□□ -0.19
CHKA-203ENST00000525155 REXO1Q8N1G1 1221 aaKnown RBP13.88□□□□□ -0.19
CHKA-203ENST00000525155 UHRF1Q96T88 793 aaPredicted RBP13.88□□□□□ -0.19
CHKA-203ENST00000525155 SENP7Q9BQF6 1050 aa13.88□□□□□ -0.19
CHKA-203ENST00000525155 VPS54Q9P1Q0 977 aa13.88□□□□□ -0.19
CHKA-203ENST00000525155 RAPGEFL1Q9UHV5 662 aa13.88□□□□□ -0.19
CHKA-203ENST00000525155 PPFIA3O75145 1194 aa13.87□□□□□ -0.19
CHKA-203ENST00000525155 CD2BP2O95400 341 aaKnown RBP13.87□□□□□ -0.19
CHKA-203ENST00000525155 CHRNA1P02708 482 aa13.87□□□□□ -0.19
CHKA-203ENST00000525155 HTRA4P83105 476 aaPredicted RBP13.87□□□□□ -0.19
CHKA-203ENST00000525155 SP4Q02446 784 aa13.87□□□□□ -0.19
CHKA-203ENST00000525155 CUL4AQ13619 759 aa13.87□□□□□ -0.19
CHKA-203ENST00000525155 SAFBQ15424 915 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHKA-203ENST00000525155 UTP14CQ5TAP6 766 aaKnown RBP13.87□□□□□ -0.19
CHKA-203ENST00000525155 RUFY4Q6ZNE9 571 aa13.87□□□□□ -0.19
CHKA-203ENST00000525155 DAGLBQ8NCG7 672 aa13.87□□□□□ -0.19
CHKA-203ENST00000525155 CYP2W1Q8TAV3 490 aa13.87□□□□□ -0.19
CHKA-203ENST00000525155 GDPD5Q8WTR4 605 aa13.87□□□□□ -0.19
CHKA-203ENST00000525155 ZBTB10Q96DT7 871 aa13.87□□□□□ -0.19
CHKA-203ENST00000525155 INTS4Q96HW7 963 aaKnown RBP13.87□□□□□ -0.19
CHKA-203ENST00000525155 PCYT2Q99447 389 aa13.87□□□□□ -0.19
CHKA-203ENST00000525155 C17orf80Q9BSJ5 609 aa13.87□□□□□ -0.19
CHKA-203ENST00000525155 MTUS1Q9ULD2 1270 aa13.87□□□□□ -0.19
CHKA-203ENST00000525155 PCDHA4Q9UN74 947 aa13.87□□□□□ -0.19
CHKA-203ENST00000525155 SMC3Q9UQE7 1217 aa13.87□□□□□ -0.19
CHKA-203ENST00000525155 UBIAD1Q9Y5Z9 338 aa13.87□□□□□ -0.19
CHKA-203ENST00000525155 PTPRSQ13332 1948 aa13.86□□□□□ -0.19
CHKA-203ENST00000525155 ADAMTS3O15072 1205 aa13.86□□□□□ -0.19
CHKA-203ENST00000525155 JAK2O60674 1132 aa13.86□□□□□ -0.19
CHKA-203ENST00000525155 CTSHP09668 335 aa13.86□□□□□ -0.19
CHKA-203ENST00000525155 FDPSP14324 419 aaKnown RBP13.86□□□□□ -0.19
CHKA-203ENST00000525155 CLK2P49760 499 aaKnown RBP13.86□□□□□ -0.19
CHKA-203ENST00000525155 ST3GAL1Q11201 340 aa13.86□□□□□ -0.19
CHKA-203ENST00000525155 GNPTABQ3T906 1256 aa13.86□□□□□ -0.19
CHKA-203ENST00000525155 FAM26DQ5JW98 314 aa13.86□□□□□ -0.19
CHKA-203ENST00000525155 MARCH8Q5T0T0 291 aa13.86□□□□□ -0.19
CHKA-203ENST00000525155 SP7Q8TDD2 431 aaPredicted RBP13.86□□□□□ -0.19
CHKA-203ENST00000525155 LMBR1Q8WVP7 490 aa13.86□□□□□ -0.19
CHKA-203ENST00000525155 ZBED2Q9BTP6 218 aa13.86□□□□□ -0.19
CHKA-203ENST00000525155 PHF20Q9BVI0 1012 aa13.86□□□□□ -0.19
CHKA-203ENST00000525155 PCDHA6Q9UN73 950 aa13.86□□□□□ -0.19
CHKA-203ENST00000525155 PCDHA8Q9Y5H6 950 aa13.86□□□□□ -0.19
CHKA-203ENST00000525155 LINC00271P0C7V0 271 aa13.85□□□□□ -0.19
CHKA-203ENST00000525155 SKIV2LQ15477 1246 aaKnown RBP13.85□□□□□ -0.19
CHKA-203ENST00000525155 BLIDQ8IZY5 108 aa13.85□□□□□ -0.19
CHKA-203ENST00000525155 KHSRPQ92945 711 aaKnown RBP eCLIP13.85□□□□□ -0.191e-10■□□□□ 8.7
CHKA-203ENST00000525155 TOP1MTQ969P6 601 aa13.85□□□□□ -0.19
CHKA-203ENST00000525155 C8orf76Q96K31 380 aa13.85□□□□□ -0.19
CHKA-203ENST00000525155 TGS1Q96RS0 853 aaKnown RBP13.85□□□□□ -0.19
CHKA-203ENST00000525155 CD320Q9NPF0 282 aa13.85□□□□□ -0.19
CHKA-203ENST00000525155 TANC1Q9C0D5 1861 aa13.84□□□□□ -0.19
CHKA-203ENST00000525155 MYH7BA7E2Y1 1941 aa13.84□□□□□ -0.19
CHKA-203ENST00000525155 MYH6P13533 1939 aa13.84□□□□□ -0.19
CHKA-203ENST00000525155 BRWD1Q9NSI6 2320 aa13.84□□□□□ -0.19
CHKA-203ENST00000525155 NOP56O00567 594 aaKnown RBP13.84□□□□□ -0.19
CHKA-203ENST00000525155 GTPBP6O43824 516 aaPredicted RBP13.84□□□□□ -0.19
CHKA-203ENST00000525155 HSP90AA1P07900 732 aaKnown RBP13.84□□□□□ -0.19
CHKA-203ENST00000525155 PDIA4P13667 645 aaKnown RBP13.84□□□□□ -0.19
CHKA-203ENST00000525155 PDCP20941 246 aa13.84□□□□□ -0.19
CHKA-203ENST00000525155 MGAT3Q09327 533 aa13.84□□□□□ -0.19
CHKA-203ENST00000525155 BECN1Q14457 450 aa13.84□□□□□ -0.19
CHKA-203ENST00000525155 KRT25Q7Z3Z0 450 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms