RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 DBR1Q9UK59 544 aaKnown RBP11.06□□□□□ -0.64
VPS13B-212ENST00000524330 MAPK8IP1Q9UQF2 711 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 RIPK3Q9Y572 518 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 PAPPA2Q9BXP8 1791 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 OTOFQ9HC10 1997 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 FRMD3A2A2Y4 597 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 DDX39AO00148 427 aaKnown RBP11.05□□□□□ -0.64
VPS13B-212ENST00000524330 EML1O00423 815 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 CETN3O15182 167 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 TUBB4AP04350 444 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 FCER1AP12319 257 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 SKILP12757 684 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 KCNJ6P48051 423 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 GCLCP48506 637 aaPredicted RBP11.05□□□□□ -0.64
VPS13B-212ENST00000524330 MRPS9P82933 396 aaKnown RBP11.05□□□□□ -0.64
VPS13B-212ENST00000524330 PPP2R3AQ06190 1150 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 EHHADHQ08426 723 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 GIT2Q14161 759 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 KRT31Q15323 416 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 ECM1Q16610 540 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 TTI2Q6NXR4 508 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 MIS18BP1Q6P0N0 1132 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 B3GNT9Q6UX72 402 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 CNGA4Q8IV77 575 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 C4orf19Q8IY42 314 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 GOLGA5Q8TBA6 731 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 CLMNQ96JQ2 1002 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 INPP4AQ96PE3 977 aaPredicted RBP11.05□□□□□ -0.64
VPS13B-212ENST00000524330 UIMC1Q96RL1 719 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 NAA15Q9BXJ9 866 aaKnown RBP11.05□□□□□ -0.64
VPS13B-212ENST00000524330 ZNF408Q9H9D4 720 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 PARVGQ9HBI0 331 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 ANKEF1Q9NU02 776 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 RGL1Q9NZL6 768 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 PCDHB13Q9Y5F0 798 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 PCDHA10Q9Y5I2 948 aa11.05□□□□□ -0.64
VPS13B-212ENST00000524330 COL11A1P12107 1806 aaPredicted RBP11.05□□□□□ -0.64
VPS13B-212ENST00000524330 RLFQ13129 1914 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 A0A1W2PQC6 194 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 AKR1B15C9JRZ8 316 aaPredicted RBP11.04□□□□□ -0.64
VPS13B-212ENST00000524330 KIF2AO00139 706 aaPredicted RBP11.04□□□□□ -0.64
VPS13B-212ENST00000524330 EIF3DO15371 548 aaKnown RBP eCLIP11.04□□□□□ -0.64
VPS13B-212ENST00000524330 TGFB3P10600 412 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 MAPTP10636 758 aaKnown RBP11.04□□□□□ -0.64
VPS13B-212ENST00000524330 GUCY2CP25092 1073 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 ICAM3P32942 547 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 UBXN1Q04323 297 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 NEDD9Q14511 834 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 HSP90AA2PQ14568 343 aaPredicted RBP11.04□□□□□ -0.64
VPS13B-212ENST00000524330 NOLC1Q14978 699 aaKnown RBP eCLIP11.04□□□□□ -0.64
VPS13B-212ENST00000524330 EDRF1Q3B7T1 1238 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 CCDC40Q4G0X9 1142 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 HSP90AA4PQ58FG1 418 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 ANKRD40Q6AI12 368 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 RINT1Q6NUQ1 792 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 ILDR2Q71H61 639 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 MYCT1Q8N699 235 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 RETREG2Q8NC44 543 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 KIAA0895Q8NCT3 520 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 IL31RAQ8NI17 732 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 KIAA1524Q8TCG1 905 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 SMCR8Q8TEV9 937 aaPredicted RBP11.04□□□□□ -0.64
VPS13B-212ENST00000524330 LRRC15Q8TF66 581 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 WNK4Q96J92 1243 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 CNOT6LQ96LI5 555 aaKnown RBP11.04□□□□□ -0.64
VPS13B-212ENST00000524330 DRC1Q96MC2 740 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 NAP1L5Q96NT1 182 aaPredicted RBP11.04□□□□□ -0.64
VPS13B-212ENST00000524330 MMP19Q99542 508 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 MOV10L1Q9BXT6 1211 aaKnown RBP11.04□□□□□ -0.64
VPS13B-212ENST00000524330 MRPL44Q9H9J2 332 aaKnown RBP11.04□□□□□ -0.64
VPS13B-212ENST00000524330 OLFML3Q9NRN5 406 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 PKD2L1Q9P0L9 805 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 LARSQ9P2J5 1176 aaKnown RBP11.04□□□□□ -0.64
VPS13B-212ENST00000524330 SLC9A2Q9UBY0 812 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 NRBP1Q9UHY1 535 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 SMCHD1A6NHR9 2005 aa11.04□□□□□ -0.64
VPS13B-212ENST00000524330 PTPRFP10586 1907 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 GOLGA6L9A6NEM1 432 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 LGALS16A8MUM7 142 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 SPATA31C2B4DYI2 1134 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 H0YCG3 227 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 TRAF5O00463 557 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 ZBTB48P10074 688 aaPredicted RBP11.03□□□□□ -0.64
VPS13B-212ENST00000524330 SCP2P22307 547 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 ALDH5A1P51649 535 aaPredicted RBP11.03□□□□□ -0.64
VPS13B-212ENST00000524330 MAN2A1Q16706 1144 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 MAP1SQ66K74 1059 aaPredicted RBP11.03□□□□□ -0.64
VPS13B-212ENST00000524330 PADI6Q6TGC4 694 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 HS2ST1Q7LGA3 356 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 ANKRD23Q86SG2 305 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 FAM178BQ8IXR5 827 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 BANK1Q8NDB2 785 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 ZNF397Q8NF99 534 aaPredicted RBP11.03□□□□□ -0.64
VPS13B-212ENST00000524330 GPRC5AQ8NFJ5 357 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 CACTINQ8WUQ7 758 aaKnown RBP11.03□□□□□ -0.64
VPS13B-212ENST00000524330 CNKSR2Q8WXI2 1034 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 PCMTD1Q96MG8 357 aaPredicted RBP11.03□□□□□ -0.64
VPS13B-212ENST00000524330 ZNF830Q96NB3 372 aaPredicted RBP11.03□□□□□ -0.64
VPS13B-212ENST00000524330 REEP2Q9BRK0 252 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 TUBGCP2Q9BSJ2 902 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms