RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 DTX3Q8N9I9 347 aa7.88□□□□□ -1.15
CPNE3-207ENST00000523588 TMEM209Q96SK2 561 aa7.88□□□□□ -1.15
CPNE3-207ENST00000523588 BOCQ9BWV1 1114 aa7.88□□□□□ -1.15
CPNE3-207ENST00000523588 B4GALT6Q9UBX8 382 aa7.88□□□□□ -1.15
CPNE3-207ENST00000523588 A0A1B0GTL3 188 aa7.87□□□□□ -1.15
CPNE3-207ENST00000523588 ZNF839A8K0R7 811 aa7.87□□□□□ -1.15
CPNE3-207ENST00000523588 KPNA6O60684 536 aa7.87□□□□□ -1.15
CPNE3-207ENST00000523588 ENO2P09104 434 aaPredicted RBP7.87□□□□□ -1.15
CPNE3-207ENST00000523588 NEK4P51957 841 aa7.87□□□□□ -1.15
CPNE3-207ENST00000523588 IRF9Q00978 393 aa7.87□□□□□ -1.15
CPNE3-207ENST00000523588 PFKPQ01813 784 aa7.87□□□□□ -1.15
CPNE3-207ENST00000523588 VASNQ6EMK4 673 aa7.87□□□□□ -1.15
CPNE3-207ENST00000523588 KRTAP9-9Q9BYP9 154 aa7.87□□□□□ -1.15
CPNE3-207ENST00000523588 KRTAP9-4Q9BYQ2 154 aa7.87□□□□□ -1.15
CPNE3-207ENST00000523588 CABP5Q9NP86 173 aa7.87□□□□□ -1.15
CPNE3-207ENST00000523588 KCNH7Q9NS40 1196 aa7.87□□□□□ -1.15
CPNE3-207ENST00000523588 PTPDC1A2A3K4 754 aa7.86□□□□□ -1.15
CPNE3-207ENST00000523588 DVL2O14641 736 aa7.86□□□□□ -1.15
CPNE3-207ENST00000523588 ZSCAN22P10073 491 aaPredicted RBP7.86□□□□□ -1.15
CPNE3-207ENST00000523588 MYCLP1P12525 358 aaPredicted RBP7.86□□□□□ -1.15
CPNE3-207ENST00000523588 PKN3Q6P5Z2 889 aa7.86□□□□□ -1.15
CPNE3-207ENST00000523588 KIF18BQ86Y91 864 aa7.86□□□□□ -1.15
CPNE3-207ENST00000523588 SIAH1Q8IUQ4 282 aa7.86□□□□□ -1.15
CPNE3-207ENST00000523588 ZSWIM3Q96MP5 696 aa7.86□□□□□ -1.15
CPNE3-207ENST00000523588 DLL4Q9NR61 685 aa7.86□□□□□ -1.15
CPNE3-207ENST00000523588 RASSF10A6NK89 507 aa7.85□□□□□ -1.15
CPNE3-207ENST00000523588 RPL13P26373 211 aaKnown RBP7.85□□□□□ -1.15
CPNE3-207ENST00000523588 HERVK_113P62684 666 aa7.85□□□□□ -1.15
CPNE3-207ENST00000523588 SEPT7Q16181 437 aaKnown RBP7.85□□□□□ -1.15
CPNE3-207ENST00000523588 SKIDA1Q1XH10 827 aa7.85□□□□□ -1.15
CPNE3-207ENST00000523588 KRTAP19-4Q3LI73 84 aa7.85□□□□□ -1.15
CPNE3-207ENST00000523588 PHF19Q5T6S3 580 aa7.85□□□□□ -1.15
CPNE3-207ENST00000523588 CREB3L3Q68CJ9 461 aa7.85□□□□□ -1.15
CPNE3-207ENST00000523588 PPM1KQ8N3J5 372 aa7.85□□□□□ -1.15
CPNE3-207ENST00000523588 CLIC6Q96NY7 704 aa7.85□□□□□ -1.15
CPNE3-207ENST00000523588 SLKQ9H2G2 1235 aaPredicted RBP7.85□□□□□ -1.15
CPNE3-207ENST00000523588 SLC39A2Q9NP94 309 aa7.85□□□□□ -1.15
CPNE3-207ENST00000523588 BTBD7Q9P203 1132 aa7.85□□□□□ -1.15
CPNE3-207ENST00000523588 SHROOM4Q9ULL8 1493 aa7.85□□□□□ -1.15
CPNE3-207ENST00000523588 PRAMEF25A6NGN4 478 aa7.84□□□□□ -1.15
CPNE3-207ENST00000523588 PDE8AO60658 829 aa7.84□□□□□ -1.15
CPNE3-207ENST00000523588 KRT37O76014 449 aa7.84□□□□□ -1.15
CPNE3-207ENST00000523588 F2P00734 622 aa7.84□□□□□ -1.15
CPNE3-207ENST00000523588 AOAHP28039 575 aa7.84□□□□□ -1.15
CPNE3-207ENST00000523588 SDHAP31040 664 aa7.84□□□□□ -1.15
CPNE3-207ENST00000523588 SKOR2Q2VWA4 1001 aaPredicted RBP7.84□□□□□ -1.15
CPNE3-207ENST00000523588 CATSPEREQ5SY80 951 aa7.84□□□□□ -1.15
CPNE3-207ENST00000523588 TTLL7Q6ZT98 887 aa7.84□□□□□ -1.15
CPNE3-207ENST00000523588 THNSL2Q86YJ6 484 aa7.84□□□□□ -1.15
CPNE3-207ENST00000523588 AHI1Q8N157 1196 aa7.84□□□□□ -1.15
CPNE3-207ENST00000523588 CARFQ8N187 725 aa7.84□□□□□ -1.15
CPNE3-207ENST00000523588 IGDCC4Q8TDY8 1250 aa7.84□□□□□ -1.15
CPNE3-207ENST00000523588 NTMQ9P121 344 aa7.84□□□□□ -1.15
CPNE3-207ENST00000523588 LOC105371045A0A1W2PR82 267 aa7.83□□□□□ -1.16
CPNE3-207ENST00000523588 HIP1RO75146 1068 aa7.83□□□□□ -1.16
CPNE3-207ENST00000523588 IL18BPO95998 194 aa7.83□□□□□ -1.16
CPNE3-207ENST00000523588 MMEP08473 750 aa7.83□□□□□ -1.16
CPNE3-207ENST00000523588 ATP2A2P16615 1042 aaKnown RBP7.83□□□□□ -1.16
CPNE3-207ENST00000523588 MASP1P48740 699 aa7.83□□□□□ -1.16
CPNE3-207ENST00000523588 SLURP1P55000 103 aa7.83□□□□□ -1.16
CPNE3-207ENST00000523588 MLLT6P55198 1093 aaPredicted RBP7.83□□□□□ -1.16
CPNE3-207ENST00000523588 DSG1Q02413 1049 aa7.83□□□□□ -1.16
CPNE3-207ENST00000523588 TMEM132BQ14DG7 1078 aa7.83□□□□□ -1.16
CPNE3-207ENST00000523588 TAF7LQ5H9L4 462 aa7.83□□□□□ -1.16
CPNE3-207ENST00000523588 CC2D1AQ6P1N0 951 aaPredicted RBP7.83□□□□□ -1.16
CPNE3-207ENST00000523588 NXPE1Q8N323 547 aa7.83□□□□□ -1.16
CPNE3-207ENST00000523588 ASB15Q8WXK1 588 aa7.83□□□□□ -1.16
CPNE3-207ENST00000523588 CROTQ9UKG9 612 aa7.83□□□□□ -1.16
CPNE3-207ENST00000523588 MAPRE3Q9UPY8 281 aa7.83□□□□□ -1.16
CPNE3-207ENST00000523588 ZNF891A8MT65 544 aaPredicted RBP7.82□□□□□ -1.16
CPNE3-207ENST00000523588 FOXP2O15409 715 aa7.82□□□□□ -1.16
CPNE3-207ENST00000523588 TRIM13O60858 407 aa7.82□□□□□ -1.16
CPNE3-207ENST00000523588 CLSTN1O94985 981 aa7.82□□□□□ -1.16
CPNE3-207ENST00000523588 MPIG6BO95866 241 aa7.82□□□□□ -1.16
CPNE3-207ENST00000523588 COL6A1P12109 1028 aa7.82□□□□□ -1.16
CPNE3-207ENST00000523588 ZNF28P17035 718 aa7.82□□□□□ -1.16
CPNE3-207ENST00000523588 MC4RP32245 332 aa7.82□□□□□ -1.16
CPNE3-207ENST00000523588 SARSP49591 514 aaKnown RBP7.82□□□□□ -1.16
CPNE3-207ENST00000523588 RNF180Q86T96 592 aa7.82□□□□□ -1.16
CPNE3-207ENST00000523588 WRNIP1Q96S55 665 aa7.82□□□□□ -1.16
CPNE3-207ENST00000523588 ARHGAP20Q9P2F6 1191 aa7.82□□□□□ -1.16
CPNE3-207ENST00000523588 ARHGAP28Q9P2N2 729 aa7.82□□□□□ -1.16
CPNE3-207ENST00000523588 PTGS1P23219 599 aa7.81□□□□□ -1.16
CPNE3-207ENST00000523588 IL13P35225 146 aa7.81□□□□□ -1.16
CPNE3-207ENST00000523588 GLRBP48167 497 aa7.81□□□□□ -1.16
CPNE3-207ENST00000523588 KIF11P52732 1056 aa7.81□□□□□ -1.16
CPNE3-207ENST00000523588 SPOCD1Q6ZMY3 1216 aa7.81□□□□□ -1.16
CPNE3-207ENST00000523588 MARCH10Q8NA82 808 aaPredicted RBP7.81□□□□□ -1.16
CPNE3-207ENST00000523588 ZCCHC14Q8WYQ9 949 aaKnown RBP7.81□□□□□ -1.16
CPNE3-207ENST00000523588 GBP4Q96PP9 640 aa7.81□□□□□ -1.16
CPNE3-207ENST00000523588 SPATA25Q9BR10 227 aa7.81□□□□□ -1.16
CPNE3-207ENST00000523588 AMNQ9BXJ7 453 aa7.81□□□□□ -1.16
CPNE3-207ENST00000523588 KCND1Q9NSA2 647 aa7.81□□□□□ -1.16
CPNE3-207ENST00000523588 ZFP69BQ9UJL9 534 aa7.81□□□□□ -1.16
CPNE3-207ENST00000523588 ZKSCAN5Q9Y2L8 839 aa7.81□□□□□ -1.16
CPNE3-207ENST00000523588 KRTAP4-8A0A0G2JLE6 195 aa7.8□□□□□ -1.16
CPNE3-207ENST00000523588 H7C1D1 291 aa7.8□□□□□ -1.16
CPNE3-207ENST00000523588 DDX3XO00571 662 aaKnown RBP eCLIP7.8□□□□□ -1.16
CPNE3-207ENST00000523588 FZD5Q13467 585 aa7.8□□□□□ -1.16
CPNE3-207ENST00000523588 STPG3Q8N7X2 389 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms