RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 NKRFO15226 690 aaKnown RBP eCLIP8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 TOP3BO95985 862 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 CFHP08603 1231 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 CDK8P49336 464 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 FOXK1P85037 733 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 PPP2R5BQ15173 497 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 GORABQ5T7V8 394 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 CCDC62Q6P9F0 684 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 SIRT2Q8IXJ6 389 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 C7orf31Q8N865 590 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 MICAL1Q8TDZ2 1067 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 SECISBP2LQ93073 1101 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 CCDC17Q96LX7 622 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 NECTIN4Q96NY8 510 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 ALG1Q9BT22 464 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 CHMP4BQ9H444 224 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 KCNK12Q9HB15 430 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 CYP26B1Q9NR63 512 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 SWAP70Q9UH65 585 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 USTQ9Y2C2 406 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 PCDHGA2Q9Y5H1 932 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 SPTA1P02549 2419 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 RAD50Q92878 1312 aa8.63□□□□□ -1.03
CTNNA1-227ENST00000521387 ADAMTS20P59510 1910 aa8.63□□□□□ -1.03
CTNNA1-227ENST00000521387 CYP2D7A0A087X1C5 515 aa8.63□□□□□ -1.03
CTNNA1-227ENST00000521387 EOMESO95936 686 aa8.63□□□□□ -1.03
CTNNA1-227ENST00000521387 TXNP10599 105 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-227ENST00000521387 NUCB1Q02818 461 aa8.63□□□□□ -1.03
CTNNA1-227ENST00000521387 ARHGAP1Q07960 439 aa8.63□□□□□ -1.03
CTNNA1-227ENST00000521387 LARP1BQ659C4 914 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-227ENST00000521387 PHLDB3Q6NSJ2 640 aa8.63□□□□□ -1.03
CTNNA1-227ENST00000521387 C12orf76Q8N812 135 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-227ENST00000521387 SDR42E1Q8WUS8 393 aa8.63□□□□□ -1.03
CTNNA1-227ENST00000521387 DDRGK1Q96HY6 314 aa8.63□□□□□ -1.03
CTNNA1-227ENST00000521387 DCP1AQ9NPI6 582 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-227ENST00000521387 CA14Q9ULX7 337 aa8.63□□□□□ -1.03
CTNNA1-227ENST00000521387 SIT1Q9Y3P8 196 aa8.63□□□□□ -1.03
CTNNA1-227ENST00000521387 CELSR3Q9NYQ7 3312 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 TMEM8BA6NDV4 472 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 HIDE1A8MVS5 230 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 TBC1D4O60343 1298 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 IGSF3O75054 1194 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 CTSHP09668 335 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 ALAS1P13196 640 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 EDNRBP24530 442 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 RBM25P49756 843 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 GATMP50440 423 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 SNAP25P60880 206 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 CSTF1Q05048 431 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 ITIH3Q06033 890 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 PDE4BQ07343 736 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 APOBRQ0VD83 1088 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 BAATQ14032 418 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 MFSD10Q14728 455 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 KIAA0753Q2KHM9 967 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 PRR23CQ6ZRP0 262 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 PDZD3Q86UT5 571 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 CERS3Q8IU89 383 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 CMTR2Q8IYT2 770 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 SCFD2Q8WU76 684 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 ATRIPQ8WXE1 791 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 RSAD2Q8WXG1 361 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 LINC01599Q8WXQ3 324 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 DDX1Q92499 740 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 FOXQ1Q9C009 403 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 SEMA4GQ9NTN9 838 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 ZSCAN32Q9NX65 697 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 ANKFY1Q9P2R3 1169 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 FEM1BQ9UK73 627 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 FBXO4Q9UKT5 387 aa8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 CTDP1Q9Y5B0 961 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-227ENST00000521387 PTPRCP08575 1304 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 IDH1O75874 414 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 F2P00734 622 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 CASTP20810 708 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 HOXC8P31273 242 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 MTHFRP42898 656 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 UBE3AQ05086 875 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 LPAL2Q16609 132 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 TKFCQ3LXA3 575 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 PAN2Q504Q3 1202 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 CES5AQ6NT32 575 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 C19orf48Q6RUI8 117 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 NSMFQ6X4W1 530 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 RTN4RL1Q86UN2 441 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 CHD1LQ86WJ1 897 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 ZCCHC14Q8WYQ9 949 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 APBB2Q92870 758 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 DBNDD2Q9BQY9 259 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 SLC4A5Q9BY07 1137 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 LNPKQ9C0E8 428 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 ANTXR1Q9H6X2 564 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 RXFP3Q9NSD7 469 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 GMEB2Q9UKD1 530 aa8.61□□□□□ -1.03
CTNNA1-227ENST00000521387 KALRNO60229 2985 aa8.6□□□□□ -1.03
CTNNA1-227ENST00000521387 FSD2A1L4K1 749 aa8.6□□□□□ -1.03
CTNNA1-227ENST00000521387 TREHO43280 583 aa8.6□□□□□ -1.03
CTNNA1-227ENST00000521387 KCNK5O95279 499 aa8.6□□□□□ -1.03
CTNNA1-227ENST00000521387 ZNF286BP0CG31 522 aa8.6□□□□□ -1.03
CTNNA1-227ENST00000521387 LY6KQ17RY6 165 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms