RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 PLIN4Q96Q06 1357 aa6.93□□□□□ -1.3
FAM49B-218ENST00000520887 A0A0G2JLL6 359 aaPredicted RBP6.92□□□□□ -1.3
FAM49B-218ENST00000520887 CCDC69A6NI79 296 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 IFIT3O14879 490 aaKnown RBP6.92□□□□□ -1.3
FAM49B-218ENST00000520887 GSC2O15499 205 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 DHX16O60231 1041 aaKnown RBP6.92□□□□□ -1.3
FAM49B-218ENST00000520887 ADAM11O75078 769 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 AOC2O75106 756 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 PRDM1O75626 825 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 CHGBP05060 677 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 AKR1B1P15121 316 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 MCM5P33992 734 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 GCLCP48506 637 aaPredicted RBP6.92□□□□□ -1.3
FAM49B-218ENST00000520887 HMGCS2P54868 508 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 TRAF1Q13077 416 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 WTAPQ15007 396 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 UVSSAQ2YD98 709 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 PRRT2Q7Z6L0 340 aaPredicted RBP6.92□□□□□ -1.3
FAM49B-218ENST00000520887 ARMC10Q8N2F6 343 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 FOXD4L4Q8WXT5 416 aaPredicted RBP6.92□□□□□ -1.3
FAM49B-218ENST00000520887 MAP4K1Q92918 833 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 CHMP4CQ96CF2 233 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 ERO1AQ96HE7 468 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 TMEM87BQ96K49 555 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 TTC14Q96N46 770 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 PSMG3-AS1Q96PY0 264 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 DNAJC18Q9H819 358 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 NYAP2Q9P242 653 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 BIN2Q9UBW5 565 aaPredicted RBP6.92□□□□□ -1.3
FAM49B-218ENST00000520887 CLIP2Q9UDT6 1046 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 PNMA2Q9UL42 364 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 SIPA1L1O43166 1804 aa6.92□□□□□ -1.3
FAM49B-218ENST00000520887 FAM155AB1AL88 458 aaPredicted RBP6.91□□□□□ -1.3
FAM49B-218ENST00000520887 B4E1Z4 1266 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 PDHXO00330 501 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 PHACTR2O75167 634 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 TNFRSF21O75509 655 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 HSPA1AP0DMV8 641 aaKnown RBP6.91□□□□□ -1.3
FAM49B-218ENST00000520887 HSPA1BP0DMV9 641 aaKnown RBP6.91□□□□□ -1.3
FAM49B-218ENST00000520887 CALM1P0DP23 149 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 CALM2P0DP24 149 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 CALM3P0DP25 149 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 TOP1P11387 765 aaKnown RBP6.91□□□□□ -1.3
FAM49B-218ENST00000520887 EEF2P13639 858 aaKnown RBP6.91□□□□□ -1.3
FAM49B-218ENST00000520887 HOXD10P28358 340 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 KIF5BP33176 963 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 COPB2P35606 906 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 SLC1A4P43007 532 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 TM4SF4P48230 202 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 ARL4DP49703 201 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 EHHADHQ08426 723 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 FAM47AQ5JRC9 791 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 CREB3L3Q68CJ9 461 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 BLOC1S2Q6QNY1 142 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 CATIPQ7Z7H3 387 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 FAM160B2Q86V87 743 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 DGKHQ86XP1 1220 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 MB21D1Q8N884 522 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 TMEM102Q8N9M5 508 aaPredicted RBP6.91□□□□□ -1.3
FAM49B-218ENST00000520887 UBASH3BQ8TF42 649 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 CHURC1Q8WUH1 139 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 SLC7A3Q8WY07 619 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 UTP4Q969X6 686 aaKnown RBP6.91□□□□□ -1.3
FAM49B-218ENST00000520887 NEK1Q96PY6 1258 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 HHIPQ96QV1 700 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 OSMRQ99650 979 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 MTA3Q9BTC8 594 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 KRTAP4-8Q9BYQ9 185 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 VCPKMTQ9H867 229 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 TCP11L1Q9NUJ3 509 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 HOXC10Q9NYD6 342 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 NAP1L2Q9ULW6 460 aaPredicted RBP6.91□□□□□ -1.3
FAM49B-218ENST00000520887 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.91□□□□□ -1.3
FAM49B-218ENST00000520887 TMX2Q9Y320 296 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 AFG3L2Q9Y4W6 797 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 MYH4Q9Y623 1939 aa6.91□□□□□ -1.3
FAM49B-218ENST00000520887 E7EWF7 191 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 EREGO14944 169 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 SLC27A2O14975 620 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 FLOT1O75955 427 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 IGLV1-40P01703 118 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 CYP21A2P08686 494 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 EDN3P14138 238 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 VCAM1P19320 739 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 STAT2P52630 851 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 PTH1RQ03431 593 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 TMEM67Q5HYA8 995 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 GPATCH4Q5T3I0 446 aaKnown RBP6.9□□□□□ -1.3
FAM49B-218ENST00000520887 WDR78Q5VTH9 848 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 RCSD1Q6JBY9 416 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 CPLX2Q6PUV4 134 aaKnown RBP6.9□□□□□ -1.3
FAM49B-218ENST00000520887 SKAP1Q86WV1 359 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 TBC1D10CQ8IV04 446 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 JMYQ8N9B5 988 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 CTCFLQ8NI51 663 aaPredicted RBP6.9□□□□□ -1.3
FAM49B-218ENST00000520887 SNX29Q8TEQ0 813 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 DCAF4Q8WV16 495 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 NXPE3Q969Y0 559 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 CEP95Q96GE4 821 aa6.9□□□□□ -1.3
FAM49B-218ENST00000520887 FAM46AQ96IP4 442 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms