RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 WTAPQ15007 396 aa10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 PTGISQ16647 500 aa10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 DGKDQ16760 1214 aa10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 GDF6Q6KF10 455 aaPredicted RBP10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 PPP1R18Q6NYC8 613 aa10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 CHST3Q7LGC8 479 aa10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 DEFB128Q7Z7B8 93 aa10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 TRIM50Q86XT4 487 aa10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 SPNS2Q8IVW8 549 aa10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 NCOA7Q8NI08 942 aa10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 PPTC7Q8NI37 304 aa10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 FAM200AQ8TCP9 573 aa10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 IGDCC4Q8TDY8 1250 aa10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 PIGSQ96S52 555 aa10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 MRVI1Q9Y6F6 885 aa10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 PNMA6FA0A0J9YX94 578 aa10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 ERICH2A1L162 156 aa10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 GCOM1H8Y6P7 765 aaPredicted RBP10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 HAS3O00219 553 aa10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 POLR2MP0CAP2 368 aa10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 MYCLP12524 364 aaPredicted RBP10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 MYOGP15173 224 aa10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 CHMP4BP1P59074 171 aa10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 RAB15P59190 212 aa10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 SKOR1P84550 965 aa10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 TRAF1Q13077 416 aa10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 BFSP2Q13515 415 aa10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 TMEM67Q5HYA8 995 aa10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 CELF3Q5SZQ8 465 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 RALYLQ86SE5 291 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 HOMER1Q86YM7 354 aa10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 MB21D2Q8IYB1 491 aaPredicted RBP10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 IL31RAQ8NI17 732 aa10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 PHOSPHO2Q8TCD6 241 aa10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 DHX38Q92620 1227 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 GAS2L1Q99501 681 aaPredicted RBP10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 SLC28A3Q9HAS3 691 aa10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 CDV3Q9UKY7 258 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 PCDHB11Q9Y5F2 797 aa10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 PCDHA11Q9Y5I1 949 aa10.73□□□□□ -0.69
CTNNA1-221ENST00000520339 TTC28Q96AY4 2481 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 PPFIA4O75335 1185 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 F2P00734 622 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 TGFB3P10600 412 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 ACTN1P12814 892 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 CLDN10P78369 228 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 SP2Q02086 613 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 RBL2Q08999 1139 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 SART3Q15020 963 aaKnown RBP10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 PGM5Q15124 567 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 KCNV1Q6PIU1 500 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 CATIPQ7Z7H3 387 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 ANKMY2Q8IV38 441 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 DHX37Q8IY37 1157 aaKnown RBP10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 CAGE1Q8TC20 777 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 AFAP1L1Q8TED9 768 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 MAP3K14Q99558 947 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 PRDM6Q9NQX0 595 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 DNAAF2Q9NVR5 837 aaKnown RBP10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 HDAC6Q9UBN7 1215 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 GTF2IRD1Q9UHL9 959 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 RBM8AQ9Y5S9 174 aaKnown RBP10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 LRRC37A2A6NM11 1700 aa10.72□□□□□ -0.69
CTNNA1-221ENST00000520339 LAMA2P24043 3122 aaKnown RBP10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 ESPNB1AK53 854 aa10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 LCTP09848 1927 aa10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 SELPP16109 830 aa10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 VARSP26640 1264 aaKnown RBP10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 CCND2P30279 289 aa10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 ATP1A2P50993 1020 aa10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 WNT7BP56706 349 aa10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 KIAA0753Q2KHM9 967 aa10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 TRIM71Q2Q1W2 868 aaKnown RBP10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 HSDL1Q3SXM5 330 aa10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 FCHSD1Q86WN1 690 aa10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 C7orf31Q8N865 590 aa10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 SPATA33Q96N06 139 aa10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 KCTD15Q96SI1 283 aaPredicted RBP10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 ALG1Q9BT22 464 aa10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 MTA3Q9BTC8 594 aa10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 KATNAL1Q9BW62 490 aa10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 FTOQ9C0B1 505 aaKnown RBP eCLIP10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 LSG1Q9H089 658 aaKnown RBP10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 LY9Q9HBG7 655 aa10.71□□□□□ -0.69
CTNNA1-221ENST00000520339 FRMPD4Q14CM0 1322 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 NBNO60934 754 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 DDAH1O94760 285 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 BAIAP3O94812 1187 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 GGPS1O95749 300 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 CXCL10P02778 98 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 ZNF286BP0CG31 522 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 CKBP12277 381 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 UBA1P22314 1058 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 IGFBP4P22692 258 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 SMARCA1P28370 1054 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 ICAM3P32942 547 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 MRPS9P82933 396 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 ZNF200P98182 395 aaPredicted RBP10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 DPYDQ12882 1025 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms