RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 M0R2C6 588 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 CBX4O00257 560 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 SLC27A2O14975 620 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 PDE8AO60658 829 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 CLASP2O75122 1294 aaKnown RBP4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 GLRX3O76003 335 aaKnown RBP4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 KRT15P19012 456 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 PMLP29590 882 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 SOX5P35711 763 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 MAGEA10P43363 369 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 MECP2P51608 486 aaKnown RBP4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 CDR1P51861 262 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 JAM2P57087 298 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 TUSC3Q13454 348 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 RTP5Q14D33 572 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 OTOP1Q7RTM1 612 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 B3GNT8Q7Z7M8 397 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 PTRH1Q86Y79 214 aaKnown RBP4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 CISD2Q8N5K1 135 aaKnown RBP4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 CHST14Q8NCH0 376 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 DDX11Q96FC9 970 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 TOE1Q96GM8 510 aaKnown RBP4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 TARS2Q9BW92 718 aaKnown RBP4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 MTFR1LQ9H019 292 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 SPC25Q9HBM1 224 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 SMURF1Q9HCE7 757 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 DTLQ9NZJ0 730 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 B4GALT6Q9UBX8 382 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 ATP23Q9Y6H3 246 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 MAN2B1O00754 1011 aa4.68□□□□□ -1.66
HMGB1P41-201ENST00000520234 DNAJC6O75061 913 aa4.68□□□□□ -1.66
HMGB1P41-201ENST00000520234 VIL1P09327 827 aaKnown RBP4.68□□□□□ -1.66
HMGB1P41-201ENST00000520234 IGFBP6P24592 240 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P41-201ENST00000520234 KRT26Q7Z3Y9 468 aa4.68□□□□□ -1.66
HMGB1P41-201ENST00000520234 THNSL2Q86YJ6 484 aa4.68□□□□□ -1.66
HMGB1P41-201ENST00000520234 IGDCC3Q8IVU1 814 aa4.68□□□□□ -1.66
HMGB1P41-201ENST00000520234 FAM177A1Q8N128 213 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P41-201ENST00000520234 ARRDC4Q8NCT1 418 aa4.68□□□□□ -1.66
HMGB1P41-201ENST00000520234 SH3RF2Q8TEC5 729 aa4.68□□□□□ -1.66
HMGB1P41-201ENST00000520234 CHAC2Q8WUX2 184 aa4.68□□□□□ -1.66
HMGB1P41-201ENST00000520234 CLEC4DQ8WXI8 215 aa4.68□□□□□ -1.66
HMGB1P41-201ENST00000520234 BOCQ9BWV1 1114 aa4.68□□□□□ -1.66
HMGB1P41-201ENST00000520234 CAAP1Q9H8G2 361 aa4.68□□□□□ -1.66
HMGB1P41-201ENST00000520234 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB1P41-201ENST00000520234 ZKSCAN5Q9Y2L8 839 aa4.68□□□□□ -1.66
HMGB1P41-201ENST00000520234 FAN1Q9Y2M0 1017 aa4.68□□□□□ -1.66
HMGB1P41-201ENST00000520234 FAM83GA6ND36 823 aa4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 TRAF5O00463 557 aa4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 KPNA6O60684 536 aa4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 HIP1RO75146 1068 aa4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 CYP2C8P10632 490 aa4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 FAHP16930 419 aa4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 STAT3P40763 770 aa4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 GDF5P43026 501 aa4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 NKX3-2P78367 333 aa4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 ADAM17P78536 824 aa4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 DHCR24Q15392 516 aa4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 PAN2Q504Q3 1202 aaKnown RBP4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 BTBD8Q5XKL5 378 aa4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 TEPPQ6URK8 271 aa4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 DDX46Q7L014 1031 aaKnown RBP4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 OR2W6PQ8NHA6 318 aa4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 CD244Q9BZW8 370 aa4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 SCAND2PQ9GZW5 306 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 BCAS3Q9H6U6 928 aa4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 IFT57Q9NWB7 429 aa4.67□□□□□ -1.66
HMGB1P41-201ENST00000520234 PTPDC1A2A3K4 754 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 C1QTNF3-AMACRE9PGA6 284 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 CYR61O00622 381 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 BUB1BO60566 1050 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 GAS7O60861 476 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 F2P00734 622 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 LRG1P02750 347 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 LTFP02788 710 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 SLPIP03973 132 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 PTPN1P18031 435 aaKnown RBP4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 SCNN1BP51168 640 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 EPHB3P54753 998 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 NCKAP1LP55160 1127 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 HERVK_113P62684 666 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 SART3Q15020 963 aaKnown RBP4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 PCBP1Q15365 356 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 ZFYVE27Q5T4F4 411 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 PKN3Q6P5Z2 889 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 CD300LDQ6UXZ3 194 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 RNF180Q86T96 592 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 NOSTRINQ8IVI9 506 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 RBM12BQ8IXT5 1001 aaKnown RBP4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 DLG3Q92796 817 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 SCYL1Q96KG9 808 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 KCNH7Q9NS40 1196 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 RIC8BQ9NVN3 520 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 TELO2Q9Y4R8 837 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 B3GALT1Q9Y5Z6 326 aa4.66□□□□□ -1.66
HMGB1P41-201ENST00000520234 FAM90A27PA6NNH2 459 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 H7C1D1 291 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 PRICKLE3O43900 615 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 C8BP07358 591 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 ZBTB48P10074 688 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms