RNA–Protein interactions for RNA: ENST00000519028.1

TNFRSF10B-204, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-204ENST00000519028 GNL2Q13823 731 aaKnown RBP23.09■■□□□ 1.29
TNFRSF10B-204ENST00000519028 LARP1BQ659C4 914 aaKnown RBP23.09■■□□□ 1.29
TNFRSF10B-204ENST00000519028 INTS4Q96HW7 963 aaKnown RBP23.09■■□□□ 1.29
TNFRSF10B-204ENST00000519028 ZNF302Q9NR11 478 aa23.09■■□□□ 1.29
TNFRSF10B-204ENST00000519028 DISC1Q9NRI5 854 aa23.09■■□□□ 1.29
TNFRSF10B-204ENST00000519028 TCEAL9Q9UHQ7 104 aa23.09■■□□□ 1.29
TNFRSF10B-204ENST00000519028 WDR64B1ANS9 1081 aa23.08■■□□□ 1.29
TNFRSF10B-204ENST00000519028 BACH1O14867 736 aa23.08■■□□□ 1.29
TNFRSF10B-204ENST00000519028 PSAPP07602 524 aa23.08■■□□□ 1.29
TNFRSF10B-204ENST00000519028 ATP4AP20648 1035 aa23.08■■□□□ 1.29
TNFRSF10B-204ENST00000519028 SLC26A2P50443 739 aa23.08■■□□□ 1.29
TNFRSF10B-204ENST00000519028 PTK7Q13308 1070 aa23.08■■□□□ 1.29
TNFRSF10B-204ENST00000519028 PLCB4Q15147 1175 aa23.08■■□□□ 1.29
TNFRSF10B-204ENST00000519028 FAM160B1Q5W0V3 765 aa23.08■■□□□ 1.29
TNFRSF10B-204ENST00000519028 DHX38Q92620 1227 aaKnown RBP23.08■■□□□ 1.29
TNFRSF10B-204ENST00000519028 ATP6V0A1Q93050 837 aa23.08■■□□□ 1.29
TNFRSF10B-204ENST00000519028 MAFBQ9Y5Q3 323 aaPredicted RBP23.08■■□□□ 1.29
TNFRSF10B-204ENST00000519028 NRCAMQ92823 1304 aa23.08■■□□□ 1.28
TNFRSF10B-204ENST00000519028 TREHO43280 583 aa23.07■■□□□ 1.28
TNFRSF10B-204ENST00000519028 CHMP2AO43633 222 aa23.07■■□□□ 1.28
TNFRSF10B-204ENST00000519028 ATP2B1P20020 1258 aa23.07■■□□□ 1.28
TNFRSF10B-204ENST00000519028 SFNP31947 248 aa23.07■■□□□ 1.28
TNFRSF10B-204ENST00000519028 UBE2OQ9C0C9 1292 aaKnown RBP23.07■■□□□ 1.28
TNFRSF10B-204ENST00000519028 WNT8AQ9H1J5 351 aa23.07■■□□□ 1.28
TNFRSF10B-204ENST00000519028 VAV3Q9UKW4 847 aa23.07■■□□□ 1.28
TNFRSF10B-204ENST00000519028 SAMM50Q9Y512 469 aa23.07■■□□□ 1.28
TNFRSF10B-204ENST00000519028 KAT6AQ92794 2004 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 H3BQV1 296 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 PITPNM1O00562 1244 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 GNAT1P11488 350 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 INSRRP14616 1297 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 CSF2RAP15509 400 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 JAK3P52333 1124 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 CCL23P55773 120 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 FPGSQ05932 587 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 PPP2R5CQ13362 524 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 MARCH8Q5T0T0 291 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 PDXDC2PQ6P474 469 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 SERINC5Q86VE9 423 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 SLFN12Q8IYM2 578 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 TMEM199Q8N511 208 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 RDM1Q8NG50 284 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 LMBR1Q8WVP7 490 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 WNT8BQ93098 351 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 GABBR1Q9UBS5 961 aa23.06■■□□□ 1.28
TNFRSF10B-204ENST00000519028 POTEB3A0JP26 581 aa23.05■■□□□ 1.28
TNFRSF10B-204ENST00000519028 NEMFO60524 1076 aa23.05■■□□□ 1.28
TNFRSF10B-204ENST00000519028 BAG4O95429 457 aaKnown RBP23.05■■□□□ 1.28
TNFRSF10B-204ENST00000519028 TOB1P50616 345 aaPredicted RBP23.05■■□□□ 1.28
TNFRSF10B-204ENST00000519028 EPHB4P54760 987 aa23.05■■□□□ 1.28
TNFRSF10B-204ENST00000519028 RBL2Q08999 1139 aa23.05■■□□□ 1.28
TNFRSF10B-204ENST00000519028 PPFIA1Q13136 1202 aa23.05■■□□□ 1.28
TNFRSF10B-204ENST00000519028 BFSP2Q13515 415 aa23.05■■□□□ 1.28
TNFRSF10B-204ENST00000519028 GRIK4Q16099 956 aa23.05■■□□□ 1.28
TNFRSF10B-204ENST00000519028 TRIM71Q2Q1W2 868 aaKnown RBP23.05■■□□□ 1.28
TNFRSF10B-204ENST00000519028 MCTP1Q6DN14 999 aa23.05■■□□□ 1.28
TNFRSF10B-204ENST00000519028 POTEBQ6S5H4 581 aa23.05■■□□□ 1.28
TNFRSF10B-204ENST00000519028 MIER3Q7Z3K6 550 aa23.05■■□□□ 1.28
TNFRSF10B-204ENST00000519028 CAGE1Q8TC20 777 aa23.05■■□□□ 1.28
TNFRSF10B-204ENST00000519028 MTMR9Q96QG7 549 aa23.05■■□□□ 1.28
TNFRSF10B-204ENST00000519028 WDR81Q562E7 1941 aa23.05■■□□□ 1.28
TNFRSF10B-204ENST00000519028 MYH9P35579 1960 aaKnown RBP23.04■■□□□ 1.28
TNFRSF10B-204ENST00000519028 EML1O00423 815 aa23.04■■□□□ 1.28
TNFRSF10B-204ENST00000519028 MARCH6O60337 910 aa23.04■■□□□ 1.28
TNFRSF10B-204ENST00000519028 MCM7P33993 719 aa23.04■■□□□ 1.28
TNFRSF10B-204ENST00000519028 TRAPPC10P48553 1259 aa23.04■■□□□ 1.28
TNFRSF10B-204ENST00000519028 ZNF174Q15697 407 aa23.04■■□□□ 1.28
TNFRSF10B-204ENST00000519028 CALCRLQ16602 461 aa23.04■■□□□ 1.28
TNFRSF10B-204ENST00000519028 C16orf59Q7L2K0 433 aa23.04■■□□□ 1.28
TNFRSF10B-204ENST00000519028 ATP8B4Q8TF62 1192 aa23.04■■□□□ 1.28
TNFRSF10B-204ENST00000519028 TNPO1Q92973 898 aaKnown RBP23.04■■□□□ 1.28
TNFRSF10B-204ENST00000519028 SCLYQ96I15 445 aa23.04■■□□□ 1.28
TNFRSF10B-204ENST00000519028 TMEM60Q9H2L4 133 aa23.04■■□□□ 1.28
TNFRSF10B-204ENST00000519028 TRPC6Q9Y210 931 aa23.04■■□□□ 1.28
TNFRSF10B-204ENST00000519028 MBLAC1A4D2B0 266 aaPredicted RBP23.03■■□□□ 1.28
TNFRSF10B-204ENST00000519028 RRN3P2A6NIE6 340 aa23.03■■□□□ 1.28
TNFRSF10B-204ENST00000519028 HBP1O60381 514 aa23.03■■□□□ 1.28
TNFRSF10B-204ENST00000519028 IQCF3P0C7M6 154 aa23.03■■□□□ 1.28
TNFRSF10B-204ENST00000519028 CKBP12277 381 aa23.03■■□□□ 1.28
TNFRSF10B-204ENST00000519028 SPIRE1Q08AE8 756 aa23.03■■□□□ 1.28
TNFRSF10B-204ENST00000519028 TTC38Q5R3I4 469 aa23.03■■□□□ 1.28
TNFRSF10B-204ENST00000519028 HSCBQ8IWL3 235 aa23.03■■□□□ 1.28
TNFRSF10B-204ENST00000519028 CCDC155Q8N6L0 562 aa23.03■■□□□ 1.28
TNFRSF10B-204ENST00000519028 RETREG2Q8NC44 543 aa23.03■■□□□ 1.28
TNFRSF10B-204ENST00000519028 VWCEQ96DN2 955 aa23.03■■□□□ 1.28
TNFRSF10B-204ENST00000519028 FOXD4L1Q9NU39 408 aa23.03■■□□□ 1.28
TNFRSF10B-204ENST00000519028 NOL7Q9UMY1 257 aaKnown RBP23.03■■□□□ 1.28
TNFRSF10B-204ENST00000519028 PCDHA12Q9UN75 941 aa23.03■■□□□ 1.28
TNFRSF10B-204ENST00000519028 IGSF9BQ9UPX0 1349 aa23.03■■□□□ 1.28
TNFRSF10B-204ENST00000519028 A0A1W2PPC1 479 aa23.02■■□□□ 1.28
TNFRSF10B-204ENST00000519028 ZNF862O60290 1169 aa23.02■■□□□ 1.28
TNFRSF10B-204ENST00000519028 ORC2Q13416 577 aaPredicted RBP23.02■■□□□ 1.28
TNFRSF10B-204ENST00000519028 PPIGQ13427 754 aaKnown RBP eCLIP23.02■■□□□ 1.282e-13■□□□□ 9.1
TNFRSF10B-204ENST00000519028 UGCGQ16739 394 aa23.02■■□□□ 1.28
TNFRSF10B-204ENST00000519028 BBXQ8WY36 941 aaPredicted RBP23.02■■□□□ 1.28
TNFRSF10B-204ENST00000519028 SELPP16109 830 aa23.01■■□□□ 1.27
TNFRSF10B-204ENST00000519028 PDCP20941 246 aa23.01■■□□□ 1.27
TNFRSF10B-204ENST00000519028 TXKP42681 527 aa23.01■■□□□ 1.27
TNFRSF10B-204ENST00000519028 IGBP1P78318 339 aa23.01■■□□□ 1.27
TNFRSF10B-204ENST00000519028 NBR1Q14596 966 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms