RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 TMEM179Q6ZVK1 233 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 ACAD11Q709F0 780 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 DYMQ7RTS9 669 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 ARMC9Q7Z3E5 817 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 ANKRD13AQ8IZ07 590 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 FMR1NBQ8N0W7 255 aaPredicted RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 DTWD1Q8N5C7 304 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 NKD1Q969G9 470 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 TRIM11Q96F44 468 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 CDCA5Q96FF9 252 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 RUSC1Q9BVN2 902 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 ZNF341Q9BYN7 854 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 GLIS2Q9BZE0 524 aaPredicted RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 TM6SF1Q9BZW5 370 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 KRT23Q9C075 422 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 TMEM39BQ9GZU3 492 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 SOX17Q9H6I2 414 aaPredicted RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 CNNM2Q9H8M5 875 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 UPF2Q9HAU5 1272 aaKnown RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 GBA2Q9HCG7 927 aaPredicted RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 CYP4F12Q9HCS2 524 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 SRA1Q9HD15 236 aaKnown RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 TCP11L1Q9NUJ3 509 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 MCM9Q9NXL9 1143 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 RBM8AQ9Y5S9 174 aaKnown RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 ASTN2O75129 1339 aaPredicted RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 SIPA1L1O43166 1804 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 NID2Q14112 1375 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 CDK5RAP2Q96SN8 1893 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 GREB1LQ9C091 1923 aaPredicted RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 THSD7BQ9C0I4 1608 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 RASSF10A6NK89 507 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 TSPY2A6NKD2 308 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 DCDC2CA8MYV0 355 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 CXCL11O14625 94 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 SLC27A2O14975 620 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 CTNND1O60716 968 aaKnown RBP2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 AOC2O75106 756 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 USP2O75604 605 aaPredicted RBP2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 ALX3O95076 343 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 CELF2O95319 508 aaKnown RBP2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 F13A1P00488 732 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 APPP05067 770 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 SSBP05455 408 aaKnown RBP eCLIP2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 ZBTB48P10074 688 aaPredicted RBP2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 ELNP15502 786 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 GLB1P16278 677 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 PSMA5P28066 241 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 SHMT1P34896 483 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 GTF2F1P35269 517 aaKnown RBP eCLIP2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 CAP2P40123 477 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 LIFRP42702 1097 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 CDK8P49336 464 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 USP14P54578 494 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 EVCP57679 992 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 RPS26P62854 115 aaKnown RBP2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 NRG1Q02297 640 aaPredicted RBP2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 PTH1RQ03431 593 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 ARID5AQ03989 594 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 PPATQ06203 517 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 RAD51AP2Q09MP3 1159 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 TCP10Q12799 353 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 TRDNQ13061 729 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 PPIL2Q13356 520 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 COL9A3Q14050 684 aaPredicted RBP2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 ABCB5Q2M3G0 1257 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 SEZ6Q53EL9 994 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 NBPF12Q5TAG4 269 aaPredicted RBP2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 RASIP1Q5U651 963 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 FDX2Q6P4F2 183 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 SHISA2Q6UWI4 295 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 BNC2Q6ZN30 1099 aaPredicted RBP2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 GK5Q6ZS86 529 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 ERMP1Q7Z2K6 904 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 HDXQ7Z353 690 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 RALYLQ86SE5 291 aaKnown RBP2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 SAPCD2Q86UD0 394 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 SGMS1Q86VZ5 419 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 C12orf40Q86WS4 652 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 IQCA1Q86XH1 822 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 DGKHQ86XP1 1220 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 ERO1BQ86YB8 467 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 TBC1D10CQ8IV04 446 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 TRIM42Q8IWZ5 723 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 ZFPM1Q8IX07 1006 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 MB21D2Q8IYB1 491 aaPredicted RBP2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 SCYL3Q8IZE3 742 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 AGGF1Q8N302 714 aaeCLIP2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 CRACR2BQ8N4Y2 399 aaPredicted RBP2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 C2orf69Q8N8R5 385 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 NCOA7Q8NI08 942 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 GPBAR1Q8TDU6 330 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 UBASH3BQ8TF42 649 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 ZNF526Q8TF50 670 aaPredicted RBP2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 GATAD2BQ8WXI9 593 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 ANKS1AQ92625 1134 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 ESR2Q92731 530 aa2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 WDR89Q96FK6 387 aaPredicted RBP2.57□□□□□ -2
SCARNA16.3-201ENST00000516595 TMEM87BQ96K49 555 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms