RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 STYK1Q6J9G0 422 aa6.2□□□□□ -1.42
LINC01088-211ENST00000515597 IFNL3Q8IZI9 196 aa6.2□□□□□ -1.42
LINC01088-211ENST00000515597 IFNL2Q8IZJ0 200 aa6.2□□□□□ -1.42
LINC01088-211ENST00000515597 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.2□□□□□ -1.42
LINC01088-211ENST00000515597 NBPF4Q96M43 638 aa6.2□□□□□ -1.42
LINC01088-211ENST00000515597 ZFYVE21Q9BQ24 234 aa6.2□□□□□ -1.42
LINC01088-211ENST00000515597 SLC39A2Q9NP94 309 aa6.2□□□□□ -1.42
LINC01088-211ENST00000515597 NUB1Q9Y5A7 615 aa6.2□□□□□ -1.42
LINC01088-211ENST00000515597 FAM47E-STBD1D6RA91 191 aa6.19□□□□□ -1.42
LINC01088-211ENST00000515597 CYR61O00622 381 aa6.19□□□□□ -1.42
LINC01088-211ENST00000515597 EPHA5P54756 1037 aa6.19□□□□□ -1.42
LINC01088-211ENST00000515597 USP10Q14694 798 aaKnown RBP6.19□□□□□ -1.42
LINC01088-211ENST00000515597 REXO1L1PQ8IX06 675 aa6.19□□□□□ -1.42
LINC01088-211ENST00000515597 LRRC47Q8N1G4 583 aaKnown RBP6.19□□□□□ -1.42
LINC01088-211ENST00000515597 GIMAP8Q8ND71 665 aaPredicted RBP6.19□□□□□ -1.42
LINC01088-211ENST00000515597 SH3RF2Q8TEC5 729 aa6.19□□□□□ -1.42
LINC01088-211ENST00000515597 NEIL1Q96FI4 390 aaPredicted RBP6.19□□□□□ -1.42
LINC01088-211ENST00000515597 TANGO6Q9C0B7 1094 aa6.19□□□□□ -1.42
LINC01088-211ENST00000515597 TRAF6Q9Y4K3 522 aa6.19□□□□□ -1.42
LINC01088-211ENST00000515597 HS3ST3A1Q9Y663 406 aa6.19□□□□□ -1.42
LINC01088-211ENST00000515597 TRAV20A0A0B4J274 112 aa6.18□□□□□ -1.42
LINC01088-211ENST00000515597 TCRBV5S4A2TA0A5A2 114 aa6.18□□□□□ -1.42
LINC01088-211ENST00000515597 ATP2B1P20020 1258 aa6.18□□□□□ -1.42
LINC01088-211ENST00000515597 KLF10Q13118 480 aa6.18□□□□□ -1.42
LINC01088-211ENST00000515597 PDGFDQ9GZP0 370 aaPredicted RBP6.18□□□□□ -1.42
LINC01088-211ENST00000515597 KATNBL1Q9H079 304 aa6.18□□□□□ -1.42
LINC01088-211ENST00000515597 SEMA4AQ9H3S1 761 aa6.18□□□□□ -1.42
LINC01088-211ENST00000515597 ING1Q9UK53 422 aaPredicted RBP6.18□□□□□ -1.42
LINC01088-211ENST00000515597 ZFR2Q9UPR6 939 aaKnown RBP6.18□□□□□ -1.42
LINC01088-211ENST00000515597 TESMINQ9Y4I5 508 aa6.18□□□□□ -1.42
LINC01088-211ENST00000515597 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.17□□□□□ -1.42
LINC01088-211ENST00000515597 U2SURPO15042 1029 aaKnown RBP6.17□□□□□ -1.42
LINC01088-211ENST00000515597 PDPK1O15530 556 aa6.17□□□□□ -1.42
LINC01088-211ENST00000515597 RRADP55042 308 aa6.17□□□□□ -1.42
LINC01088-211ENST00000515597 RASGRF1Q13972 1273 aa6.17□□□□□ -1.42
LINC01088-211ENST00000515597 USP51Q70EK9 711 aa6.17□□□□□ -1.42
LINC01088-211ENST00000515597 TAX1BP1Q86VP1 789 aa6.17□□□□□ -1.42
LINC01088-211ENST00000515597 ARMC5Q96C12 935 aa6.17□□□□□ -1.42
LINC01088-211ENST00000515597 ADOQ96SZ5 270 aa6.17□□□□□ -1.42
LINC01088-211ENST00000515597 ALG1Q9BT22 464 aa6.17□□□□□ -1.42
LINC01088-211ENST00000515597 ZNF341Q9BYN7 854 aa6.17□□□□□ -1.42
LINC01088-211ENST00000515597 CCDC113Q9H0I3 377 aa6.17□□□□□ -1.42
LINC01088-211ENST00000515597 PCED1AQ9H1Q7 454 aa6.17□□□□□ -1.42
LINC01088-211ENST00000515597 ESYT3A0FGR9 886 aa6.16□□□□□ -1.42
LINC01088-211ENST00000515597 DBPQ10586 325 aaPredicted RBP6.16□□□□□ -1.42
LINC01088-211ENST00000515597 ZNF568Q3ZCX4 644 aa6.16□□□□□ -1.42
LINC01088-211ENST00000515597 HS1BP3Q53T59 392 aa6.16□□□□□ -1.42
LINC01088-211ENST00000515597 FUKQ8N0W3 1084 aa6.16□□□□□ -1.42
LINC01088-211ENST00000515597 SPATA9Q9BWV2 254 aa6.16□□□□□ -1.42
LINC01088-211ENST00000515597 SIRPGQ9P1W8 387 aa6.16□□□□□ -1.42
LINC01088-211ENST00000515597 FAM90A27PA6NNH2 459 aa6.15□□□□□ -1.42
LINC01088-211ENST00000515597 NOLC1Q14978 699 aaKnown RBP eCLIP6.15□□□□□ -1.42
LINC01088-211ENST00000515597 PRKD1Q15139 912 aaPredicted RBP6.15□□□□□ -1.42
LINC01088-211ENST00000515597 RNF151Q2KHN1 245 aa6.15□□□□□ -1.42
LINC01088-211ENST00000515597 BTBD8Q5XKL5 378 aa6.15□□□□□ -1.42
LINC01088-211ENST00000515597 SPATC1Q76KD6 591 aa6.15□□□□□ -1.42
LINC01088-211ENST00000515597 MENTQ9BUN1 341 aa6.15□□□□□ -1.42
LINC01088-211ENST00000515597 HIRIP3Q9BW71 556 aaPredicted RBP6.15□□□□□ -1.42
LINC01088-211ENST00000515597 CARD11Q9BXL7 1154 aa6.15□□□□□ -1.42
LINC01088-211ENST00000515597 RIC8BQ9NVN3 520 aa6.15□□□□□ -1.42
LINC01088-211ENST00000515597 SRPK3Q9UPE1 567 aa6.15□□□□□ -1.42
LINC01088-211ENST00000515597 OVOL3O00110 214 aa6.14□□□□□ -1.43
LINC01088-211ENST00000515597 ADCY3O60266 1144 aa6.14□□□□□ -1.43
LINC01088-211ENST00000515597 PTPN1P18031 435 aaKnown RBP6.14□□□□□ -1.43
LINC01088-211ENST00000515597 POLD1P28340 1107 aa6.14□□□□□ -1.43
LINC01088-211ENST00000515597 RAC3P60763 192 aa6.14□□□□□ -1.43
LINC01088-211ENST00000515597 RBL2Q08999 1139 aa6.14□□□□□ -1.43
LINC01088-211ENST00000515597 TOP3AQ13472 1001 aaPredicted RBP6.14□□□□□ -1.43
LINC01088-211ENST00000515597 SERINC3Q13530 473 aa6.14□□□□□ -1.43
LINC01088-211ENST00000515597 RNF207Q6ZRF8 634 aa6.14□□□□□ -1.43
LINC01088-211ENST00000515597 ARHGAP36Q6ZRI8 547 aa6.14□□□□□ -1.43
LINC01088-211ENST00000515597 MTDHQ86UE4 582 aaKnown RBP6.14□□□□□ -1.43
LINC01088-211ENST00000515597 DPYSL5Q9BPU6 564 aa6.14□□□□□ -1.43
LINC01088-211ENST00000515597 ARHGAP28Q9P2N2 729 aa6.14□□□□□ -1.43
LINC01088-211ENST00000515597 NPIPB8E9PQR5 432 aa6.13□□□□□ -1.43
LINC01088-211ENST00000515597 MAN2B1O00754 1011 aa6.13□□□□□ -1.43
LINC01088-211ENST00000515597 COMTP21964 271 aa6.13□□□□□ -1.43
LINC01088-211ENST00000515597 GTF2F1P35269 517 aaKnown RBP eCLIP6.13□□□□□ -1.43
LINC01088-211ENST00000515597 PAK1Q13153 545 aa6.13□□□□□ -1.43
LINC01088-211ENST00000515597 WDR72Q3MJ13 1102 aa6.13□□□□□ -1.43
LINC01088-211ENST00000515597 NRN1LQ496H8 165 aa6.13□□□□□ -1.43
LINC01088-211ENST00000515597 MTERF2Q49AM1 385 aa6.13□□□□□ -1.43
LINC01088-211ENST00000515597 DPH6Q7L8W6 267 aa6.13□□□□□ -1.43
LINC01088-211ENST00000515597 PTRH1Q86Y79 214 aaKnown RBP6.13□□□□□ -1.43
LINC01088-211ENST00000515597 KIAA1683Q9H0B3 1180 aa6.13□□□□□ -1.43
LINC01088-211ENST00000515597 PPP1R1BQ9UD71 204 aaPredicted RBP6.13□□□□□ -1.43
LINC01088-211ENST00000515597 OAZ3Q9UMX2 235 aa6.13□□□□□ -1.43
LINC01088-211ENST00000515597 CUTAO60888 179 aa6.12□□□□□ -1.43
LINC01088-211ENST00000515597 AMY2AP04746 511 aa6.12□□□□□ -1.43
LINC01088-211ENST00000515597 KRT15P19012 456 aa6.12□□□□□ -1.43
LINC01088-211ENST00000515597 AMY2BP19961 511 aa6.12□□□□□ -1.43
LINC01088-211ENST00000515597 MC4RP32245 332 aa6.12□□□□□ -1.43
LINC01088-211ENST00000515597 ADCY8P40145 1251 aa6.12□□□□□ -1.43
LINC01088-211ENST00000515597 FOXE3Q13461 319 aa6.12□□□□□ -1.43
LINC01088-211ENST00000515597 GPR19Q15760 415 aa6.12□□□□□ -1.43
LINC01088-211ENST00000515597 USP39Q53GS9 565 aaKnown RBP6.12□□□□□ -1.43
LINC01088-211ENST00000515597 CRB2Q5IJ48 1285 aa6.12□□□□□ -1.43
LINC01088-211ENST00000515597 AGBL4Q5VU57 503 aa6.12□□□□□ -1.43
LINC01088-211ENST00000515597 IGFL4Q6B9Z1 124 aa6.12□□□□□ -1.43
LINC01088-211ENST00000515597 LRP10Q7Z4F1 713 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms