RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 PFKPQ01813 784 aa6.95□□□□□ -1.3
SMARCA5-203ENST00000515531 DLX2Q07687 328 aaPredicted RBP6.95□□□□□ -1.3
SMARCA5-203ENST00000515531 DBPQ10586 325 aaPredicted RBP6.95□□□□□ -1.3
SMARCA5-203ENST00000515531 DALRD3Q5D0E6 543 aaKnown RBP6.95□□□□□ -1.3
SMARCA5-203ENST00000515531 LRRTM3Q86VH5 581 aa6.95□□□□□ -1.3
SMARCA5-203ENST00000515531 SP8Q8IXZ3 490 aa6.95□□□□□ -1.3
SMARCA5-203ENST00000515531 CARFQ8N187 725 aa6.95□□□□□ -1.3
SMARCA5-203ENST00000515531 CHST14Q8NCH0 376 aa6.95□□□□□ -1.3
SMARCA5-203ENST00000515531 ZCCHC4Q9H5U6 513 aa6.95□□□□□ -1.3
SMARCA5-203ENST00000515531 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 FBXO21O94952 628 aa6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 SLURP1P55000 103 aa6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 IRF9Q00978 393 aa6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 TMEM132BQ14DG7 1078 aa6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 SKIDA1Q1XH10 827 aa6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 PLEKHG4Q58EX7 1191 aa6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 PROSER1Q86XN7 944 aa6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 NOSTRINQ8IVI9 506 aa6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 AHI1Q8N157 1196 aa6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 DTX3Q8N9I9 347 aa6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 MARCH10Q8NA82 808 aaPredicted RBP6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 TP53I13Q8NBR0 393 aaPredicted RBP6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 IGDCC4Q8TDY8 1250 aa6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 MFSD3Q96ES6 412 aa6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 BOCQ9BWV1 1114 aa6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 L2HGDHQ9H9P8 463 aa6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 LUC7LQ9NQ29 371 aaKnown RBP6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 KCNH7Q9NS40 1196 aa6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 ARHGAP20Q9P2F6 1191 aa6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 WASF3Q9UPY6 502 aa6.94□□□□□ -1.3
SMARCA5-203ENST00000515531 PTPDC1A2A3K4 754 aa6.93□□□□□ -1.3
SMARCA5-203ENST00000515531 DDX3XO00571 662 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMARCA5-203ENST00000515531 TRIM13O60858 407 aa6.93□□□□□ -1.3
SMARCA5-203ENST00000515531 C4BPAP04003 597 aaKnown RBP6.93□□□□□ -1.3
SMARCA5-203ENST00000515531 GLRBP48167 497 aa6.93□□□□□ -1.3
SMARCA5-203ENST00000515531 GYS2P54840 703 aa6.93□□□□□ -1.3
SMARCA5-203ENST00000515531 HERVK_113P62684 666 aa6.93□□□□□ -1.3
SMARCA5-203ENST00000515531 OTOP1Q7RTM1 612 aa6.93□□□□□ -1.3
SMARCA5-203ENST00000515531 PPM1KQ8N3J5 372 aa6.93□□□□□ -1.3
SMARCA5-203ENST00000515531 DDX1Q92499 740 aaKnown RBP6.93□□□□□ -1.3
SMARCA5-203ENST00000515531 SPATA25Q9BR10 227 aa6.93□□□□□ -1.3
SMARCA5-203ENST00000515531 KRTAP4-9Q9BYQ8 210 aa6.93□□□□□ -1.3
SMARCA5-203ENST00000515531 SLC39A2Q9NP94 309 aa6.93□□□□□ -1.3
SMARCA5-203ENST00000515531 ZKSCAN5Q9Y2L8 839 aa6.93□□□□□ -1.3
SMARCA5-203ENST00000515531 ZNF839A8K0R7 811 aa6.92□□□□□ -1.3
SMARCA5-203ENST00000515531 H7C1D1 291 aa6.92□□□□□ -1.3
SMARCA5-203ENST00000515531 TRAF5O00463 557 aa6.92□□□□□ -1.3
SMARCA5-203ENST00000515531 KPNA6O60684 536 aa6.92□□□□□ -1.3
SMARCA5-203ENST00000515531 IL13P35225 146 aa6.92□□□□□ -1.3
SMARCA5-203ENST00000515531 MECP2P51608 486 aaKnown RBP6.92□□□□□ -1.3
SMARCA5-203ENST00000515531 ZNF174Q15697 407 aa6.92□□□□□ -1.3
SMARCA5-203ENST00000515531 PHF19Q5T6S3 580 aa6.92□□□□□ -1.3
SMARCA5-203ENST00000515531 MCTP2Q6DN12 878 aa6.92□□□□□ -1.3
SMARCA5-203ENST00000515531 TRMT10BQ6PF06 316 aaKnown RBP6.92□□□□□ -1.3
SMARCA5-203ENST00000515531 IFT57Q9NWB7 429 aa6.92□□□□□ -1.3
SMARCA5-203ENST00000515531 B4GALT6Q9UBX8 382 aa6.92□□□□□ -1.3
SMARCA5-203ENST00000515531 B3GALT1Q9Y5Z6 326 aa6.92□□□□□ -1.3
SMARCA5-203ENST00000515531 CBX4O00257 560 aa6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 FOXP2O15409 715 aa6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 GAS7O60861 476 aa6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 CYP1A1P04798 512 aaPredicted RBP6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 ZBTB48P10074 688 aaPredicted RBP6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 POU3F2P20265 443 aaPredicted RBP6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 SART3Q15020 963 aaKnown RBP6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 SEC23AQ15436 765 aa6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 PRR31Q5SQ13 230 aa6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 DPP8Q6V1X1 898 aaPredicted RBP6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 HIPK4Q8NE63 616 aa6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 WDR48Q8TAF3 677 aa6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 ADAMTS17Q8TE56 1095 aa6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 DLG3Q92796 817 aa6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 TARS2Q9BW92 718 aaKnown RBP6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 PCIF1Q9H4Z3 704 aa6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 USP40Q9NVE5 1235 aa6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 ZFP69BQ9UJL9 534 aa6.91□□□□□ -1.3
SMARCA5-203ENST00000515531 PTGS1P23219 599 aa6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 AOAHP28039 575 aa6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 KIF11P52732 1056 aa6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 MLLT6P55198 1093 aaPredicted RBP6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 RTP5Q14D33 572 aa6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 SMAD2Q15796 467 aaKnown RBP6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 TM4SF20Q53R12 229 aa6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 FBLN7Q53RD9 439 aa6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 NT5DC1Q5TFE4 455 aa6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 FSTL4Q6MZW2 842 aa6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 CC2D1AQ6P1N0 951 aaPredicted RBP6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 SPOCD1Q6ZMY3 1216 aa6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 STPG3Q8N7X2 389 aa6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 KCNC2Q96PR1 638 aa6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 TACO1Q9BSH4 297 aaKnown RBP6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 TMEM168Q9H0V1 697 aa6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 PARD6AQ9NPB6 346 aa6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 INCENPQ9NQS7 918 aa6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 FTSJ1Q9UET6 329 aa6.9□□□□□ -1.3
SMARCA5-203ENST00000515531 CHGBP05060 677 aa6.89□□□□□ -1.31
SMARCA5-203ENST00000515531 MMEP08473 750 aa6.89□□□□□ -1.31
SMARCA5-203ENST00000515531 MYCLP1P12525 358 aaPredicted RBP6.89□□□□□ -1.31
SMARCA5-203ENST00000515531 ZNF28P17035 718 aa6.89□□□□□ -1.31
SMARCA5-203ENST00000515531 SDHAP31040 664 aa6.89□□□□□ -1.31
SMARCA5-203ENST00000515531 GJA9P57773 515 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms