RNA–Protein interactions for RNA: ENST00000515316.5

SPOCK3-224, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 4

Gene SPOCK3, Length 524 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-224ENST00000515316 SMIM10L2AP0DMW4 78 aa28.46■■■□□ 2.15
SPOCK3-224ENST00000515316 SMIM10L2BP0DMW5 78 aa28.46■■■□□ 2.15
SPOCK3-224ENST00000515316 FERMT3Q86UX7 667 aa28.46■■■□□ 2.15
SPOCK3-224ENST00000515316 CCDC60Q8IWA6 550 aaPredicted RBP28.46■■■□□ 2.15
SPOCK3-224ENST00000515316 PPP1R13LQ8WUF5 828 aa28.46■■■□□ 2.15
SPOCK3-224ENST00000515316 TMEM60Q9H2L4 133 aa28.46■■■□□ 2.15
SPOCK3-224ENST00000515316 ZSCAN16Q9H4T2 348 aaPredicted RBP28.46■■■□□ 2.15
SPOCK3-224ENST00000515316 TTC12Q9H892 705 aaPredicted RBP28.46■■■□□ 2.15
SPOCK3-224ENST00000515316 PRDM5Q9NQX1 630 aaPredicted RBP28.46■■■□□ 2.15
SPOCK3-224ENST00000515316 GABBR1Q9UBS5 961 aa28.46■■■□□ 2.15
SPOCK3-224ENST00000515316 PCDHB6Q9Y5E3 794 aa28.46■■■□□ 2.15
SPOCK3-224ENST00000515316 MAFBQ9Y5Q3 323 aaPredicted RBP28.46■■■□□ 2.15
SPOCK3-224ENST00000515316 C17orf102A2RUQ5 167 aa28.45■■■□□ 2.14
SPOCK3-224ENST00000515316 OR52Z1P0C646 297 aa28.45■■■□□ 2.14
SPOCK3-224ENST00000515316 MARK3P27448 753 aa28.45■■■□□ 2.14
SPOCK3-224ENST00000515316 NBR1Q14596 966 aa28.45■■■□□ 2.14
SPOCK3-224ENST00000515316 PTGISQ16647 500 aa28.45■■■□□ 2.14
SPOCK3-224ENST00000515316 GDF6Q6KF10 455 aaPredicted RBP28.45■■■□□ 2.14
SPOCK3-224ENST00000515316 PDLIM7Q9NR12 457 aa28.45■■■□□ 2.14
SPOCK3-224ENST00000515316 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.45■■■□□ 2.14
SPOCK3-224ENST00000515316 TRMT13Q9NUP7 481 aaKnown RBP28.45■■■□□ 2.14
SPOCK3-224ENST00000515316 NRCAMQ92823 1304 aa28.44■■■□□ 2.14
SPOCK3-224ENST00000515316 LAD1O00515 517 aa28.44■■■□□ 2.14
SPOCK3-224ENST00000515316 KIAA0355O15063 1070 aa28.44■■■□□ 2.14
SPOCK3-224ENST00000515316 CKAP2LQ8IYA6 745 aa28.44■■■□□ 2.14
SPOCK3-224ENST00000515316 ZMYND8Q9ULU4 1186 aaPredicted RBP28.44■■■□□ 2.14
SPOCK3-224ENST00000515316 POTEB3A0JP26 581 aa28.43■■■□□ 2.14
SPOCK3-224ENST00000515316 RESTQ13127 1097 aa28.43■■■□□ 2.14
SPOCK3-224ENST00000515316 PTGDRQ13258 359 aa28.43■■■□□ 2.14
SPOCK3-224ENST00000515316 PLCB4Q15147 1175 aa28.43■■■□□ 2.14
SPOCK3-224ENST00000515316 EPHA7Q15375 998 aa28.43■■■□□ 2.14
SPOCK3-224ENST00000515316 POTEBQ6S5H4 581 aa28.43■■■□□ 2.14
SPOCK3-224ENST00000515316 C4orf32Q8N8J7 132 aa28.43■■■□□ 2.14
SPOCK3-224ENST00000515316 ATP6V0A1Q93050 837 aa28.43■■■□□ 2.14
SPOCK3-224ENST00000515316 TRPC6Q9Y210 931 aa28.43■■■□□ 2.14
SPOCK3-224ENST00000515316 DNAH12Q6ZR08 3092 aa28.43■■■□□ 2.14
SPOCK3-224ENST00000515316 RRN3P2A6NIE6 340 aa28.42■■■□□ 2.14
SPOCK3-224ENST00000515316 H0YGN5 161 aa28.42■■■□□ 2.14
SPOCK3-224ENST00000515316 HBP1O60381 514 aa28.42■■■□□ 2.14
SPOCK3-224ENST00000515316 DKC1O60832 514 aaKnown RBP eCLIP28.42■■■□□ 2.14
SPOCK3-224ENST00000515316 PPFIA1Q13136 1202 aa28.42■■■□□ 2.14
SPOCK3-224ENST00000515316 TMEM266Q2M3C6 531 aa28.42■■■□□ 2.14
SPOCK3-224ENST00000515316 NCAPH2Q6IBW4 605 aa28.42■■■□□ 2.14
SPOCK3-224ENST00000515316 SH3RF1Q7Z6J0 888 aa28.42■■■□□ 2.14
SPOCK3-224ENST00000515316 NRBP2Q9NSY0 501 aa28.42■■■□□ 2.14
SPOCK3-224ENST00000515316 SETD4Q9NVD3 440 aa28.42■■■□□ 2.14
SPOCK3-224ENST00000515316 TBX21Q9UL17 535 aa28.42■■■□□ 2.14
SPOCK3-224ENST00000515316 TRIM43BA6NCK2 446 aa28.41■■■□□ 2.14
SPOCK3-224ENST00000515316 EML1O00423 815 aa28.41■■■□□ 2.14
SPOCK3-224ENST00000515316 RAG1P15918 1043 aa28.41■■■□□ 2.14
SPOCK3-224ENST00000515316 SYN1P17600 705 aa28.41■■■□□ 2.14
SPOCK3-224ENST00000515316 HOXC8P31273 242 aa28.41■■■□□ 2.14
SPOCK3-224ENST00000515316 SPIRE1Q08AE8 756 aa28.41■■■□□ 2.14
SPOCK3-224ENST00000515316 ATP8B4Q8TF62 1192 aa28.41■■■□□ 2.14
SPOCK3-224ENST00000515316 BBXQ8WY36 941 aaPredicted RBP28.41■■■□□ 2.14
SPOCK3-224ENST00000515316 TRIM43Q96BQ3 446 aaPredicted RBP28.41■■■□□ 2.14
SPOCK3-224ENST00000515316 FAM167AQ96KS9 214 aa28.41■■■□□ 2.14
SPOCK3-224ENST00000515316 BMP15O95972 392 aa28.4■■■□□ 2.14
SPOCK3-224ENST00000515316 P4HBP07237 508 aaKnown RBP28.4■■■□□ 2.14
SPOCK3-224ENST00000515316 INSRRP14616 1297 aa28.4■■■□□ 2.14
SPOCK3-224ENST00000515316 PSMC5P62195 406 aa28.4■■■□□ 2.14
SPOCK3-224ENST00000515316 CEP131Q9UPN4 1083 aa28.4■■■□□ 2.14
SPOCK3-224ENST00000515316 TNRC18O15417 2968 aaPredicted RBP28.4■■■□□ 2.14
SPOCK3-224ENST00000515316 IGSF9BQ9UPX0 1349 aa28.4■■■□□ 2.14
SPOCK3-224ENST00000515316 TIMP1P01033 207 aa28.39■■■□□ 2.14
SPOCK3-224ENST00000515316 CYP2C9P11712 490 aa28.39■■■□□ 2.14
SPOCK3-224ENST00000515316 ATP4AP20648 1035 aa28.39■■■□□ 2.14
SPOCK3-224ENST00000515316 PRPHP41219 470 aa28.39■■■□□ 2.14
SPOCK3-224ENST00000515316 TECP42680 631 aa28.39■■■□□ 2.14
SPOCK3-224ENST00000515316 QARSP47897 775 aaKnown RBP28.39■■■□□ 2.14
SPOCK3-224ENST00000515316 PTK7Q13308 1070 aa28.39■■■□□ 2.14
SPOCK3-224ENST00000515316 GRIK4Q16099 956 aa28.39■■■□□ 2.14
SPOCK3-224ENST00000515316 ZNF484Q5JVG2 852 aa28.39■■■□□ 2.14
SPOCK3-224ENST00000515316 CCDC155Q8N6L0 562 aa28.39■■■□□ 2.14
SPOCK3-224ENST00000515316 LBHD1Q9BQE6 289 aaPredicted RBP28.39■■■□□ 2.14
SPOCK3-224ENST00000515316 RAB34Q9BZG1 259 aa28.39■■■□□ 2.14
SPOCK3-224ENST00000515316 HIPK3Q9H422 1215 aa28.39■■■□□ 2.14
SPOCK3-224ENST00000515316 ZSCAN22P10073 491 aaPredicted RBP28.38■■■□□ 2.13
SPOCK3-224ENST00000515316 ZNF200P98182 395 aaPredicted RBP28.38■■■□□ 2.13
SPOCK3-224ENST00000515316 BFSP2Q13515 415 aa28.38■■■□□ 2.13
SPOCK3-224ENST00000515316 LMBR1Q8WVP7 490 aa28.38■■■□□ 2.13
SPOCK3-224ENST00000515316 TREHO43280 583 aa28.37■■■□□ 2.13
SPOCK3-224ENST00000515316 FXR2P51116 673 aaKnown RBP eCLIP28.37■■■□□ 2.13
SPOCK3-224ENST00000515316 ADAM17P78536 824 aa28.37■■■□□ 2.13
SPOCK3-224ENST00000515316 ATP2C1P98194 919 aaPredicted RBP28.37■■■□□ 2.13
SPOCK3-224ENST00000515316 HIC1Q14526 733 aa28.37■■■□□ 2.13
SPOCK3-224ENST00000515316 PDIA5Q14554 519 aa28.37■■■□□ 2.13
SPOCK3-224ENST00000515316 DTHD1Q6ZMT9 781 aa28.37■■■□□ 2.13
SPOCK3-224ENST00000515316 BANK1Q8NDB2 785 aa28.37■■■□□ 2.13
SPOCK3-224ENST00000515316 NEK9Q8TD19 979 aa28.37■■■□□ 2.13
SPOCK3-224ENST00000515316 COL1A2P08123 1366 aa28.37■■■□□ 2.13
SPOCK3-224ENST00000515316 PDE4DIPQ5VU43 2346 aa28.36■■■□□ 2.13
SPOCK3-224ENST00000515316 ZNF862O60290 1169 aa28.36■■■□□ 2.13
SPOCK3-224ENST00000515316 OATP04181 439 aa28.36■■■□□ 2.13
SPOCK3-224ENST00000515316 IGBP1P78318 339 aa28.36■■■□□ 2.13
SPOCK3-224ENST00000515316 PRKCEQ02156 737 aa28.36■■■□□ 2.13
SPOCK3-224ENST00000515316 UGCGQ16739 394 aa28.36■■■□□ 2.13
SPOCK3-224ENST00000515316 XKR3Q5GH77 459 aa28.36■■■□□ 2.13
SPOCK3-224ENST00000515316 SERINC5Q86VE9 423 aa28.36■■■□□ 2.13
SPOCK3-224ENST00000515316 RETREG2Q8NC44 543 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms