RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 SH3BP5LQ7L8J4 393 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 PODNQ7Z5L7 613 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 NYAP2Q9P242 653 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.82□□□□□ -0.2
SDHA-216ENST00000514027 SPDYE3A6NKU9 549 aa13.81□□□□□ -0.2
SDHA-216ENST00000514027 LRRIQ3A6PVS8 624 aaPredicted RBP13.81□□□□□ -0.2
SDHA-216ENST00000514027 F5H6K3 240 aa13.81□□□□□ -0.2
SDHA-216ENST00000514027 MAGEA1P43355 309 aa13.81□□□□□ -0.2
SDHA-216ENST00000514027 POLR2FP61218 127 aaKnown RBP13.81□□□□□ -0.2
SDHA-216ENST00000514027 RASSF7Q02833 373 aa13.81□□□□□ -0.2
SDHA-216ENST00000514027 ARID5AQ03989 594 aa13.81□□□□□ -0.2
SDHA-216ENST00000514027 KLRC3Q07444 240 aa13.81□□□□□ -0.2
SDHA-216ENST00000514027 GSPT2Q8IYD1 628 aaKnown RBP13.81□□□□□ -0.2
SDHA-216ENST00000514027 SLFN12Q8IYM2 578 aa13.81□□□□□ -0.2
SDHA-216ENST00000514027 SCFD1Q8WVM8 642 aa13.81□□□□□ -0.2
SDHA-216ENST00000514027 RPGRIP1Q96KN7 1286 aa13.81□□□□□ -0.2
SDHA-216ENST00000514027 GDAP1L1Q96MZ0 367 aa13.81□□□□□ -0.2
SDHA-216ENST00000514027 HINFPQ9BQA5 517 aa13.81□□□□□ -0.2
SDHA-216ENST00000514027 AMNQ9BXJ7 453 aa13.81□□□□□ -0.2
SDHA-216ENST00000514027 EMILIN3Q9NT22 766 aa13.81□□□□□ -0.2
SDHA-216ENST00000514027 BUB1O43683 1085 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 PHACTR2O75167 634 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 CXCR5P32302 372 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 LIG3P49916 1009 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 PABPC4Q13310 644 aaKnown RBP eCLIP13.8□□□□□ -0.25e-16■■□□□ 14.4
SDHA-216ENST00000514027 AP3B2Q13367 1082 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 ABCB5Q2M3G0 1257 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 HSP90B2PQ58FF3 399 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 IQCEQ6IPM2 695 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 NFRKBQ6P4R8 1299 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 FBXO11Q86XK2 927 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 P2RX7Q99572 595 aaKnown RBP13.8□□□□□ -0.2
SDHA-216ENST00000514027 SNX12Q9UMY4 172 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 NDUFB10O96000 172 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 HOXA7P31268 230 aaPredicted RBP13.8□□□□□ -0.2
SDHA-216ENST00000514027 HOXA13P31271 388 aaPredicted RBP13.8□□□□□ -0.2
SDHA-216ENST00000514027 PSMC6P62333 389 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 CYP4A11Q02928 519 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 ADAM9Q13443 819 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 RAPGEF1Q13905 1077 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 FAM83BQ5T0W9 1011 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 SFMBT2Q5VUG0 894 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 FBXW10Q5XX13 1052 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 TMEM179Q6ZVK1 233 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 CATSPER3Q86XQ3 398 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 SPICE1Q8N0Z3 855 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 ERMNQ8TAM6 284 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 FAM71BQ8TC56 605 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 COG1Q8WTW3 980 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 MKL1Q969V6 931 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 CALR3Q96L12 384 aaKnown RBP13.8□□□□□ -0.2
SDHA-216ENST00000514027 CEP63Q96MT8 703 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 TDRD3Q9H7E2 651 aaKnown RBP13.8□□□□□ -0.2
SDHA-216ENST00000514027 CEP72Q9P209 647 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 PCDHA2Q9Y5H9 948 aa13.8□□□□□ -0.2
SDHA-216ENST00000514027 NCK2O43639 380 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 ELF1P32519 619 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 MATR3P43243 847 aaKnown RBP eCLIP13.79□□□□□ -0.2
SDHA-216ENST00000514027 CASP5P51878 434 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 SLC12A3P55017 1021 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 SLC9C1Q4G0N8 1177 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 ARSHQ5FYA8 562 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 DACT2Q5SW24 774 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 STRIP1Q5VSL9 837 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 SYDE2Q5VT97 1194 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 SIAH1Q8IUQ4 282 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 ETNPPLQ8TBG4 499 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 ACBD3Q9H3P7 528 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 SCN9AQ15858 1988 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 FAM86B1E9PN63 330 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 LCA5LO95447 670 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 GNA14O95837 355 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 GH2P01242 217 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 FAM86B2P0C5J1 330 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 NR2F2P24468 414 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 MCM3P25205 808 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 DNA2P51530 1060 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 INHBEP58166 350 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 NEDD9Q14511 834 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 CCDC181Q5TID7 509 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 JPH2Q9BR39 696 aaPredicted RBP13.79□□□□□ -0.2
SDHA-216ENST00000514027 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.79□□□□□ -0.2
SDHA-216ENST00000514027 IDI2Q9BXS1 227 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 KCTD10Q9H3F6 313 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 POLD4Q9HCU8 107 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 SMARCAL1Q9NZC9 954 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 EHD2Q9NZN4 543 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 SALL4Q9UJQ4 1053 aa13.79□□□□□ -0.2
SDHA-216ENST00000514027 MYH10P35580 1976 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 CYP3A7-CYP3A51PA0A087WV96 503 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 H0YHG0 523 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 NOL4O94818 638 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 CYP3A7P24462 503 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 ZNF76P36508 570 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 SARNPP82979 210 aaKnown RBP13.78□□□□□ -0.2
SDHA-216ENST00000514027 SETQ01105 290 aaPredicted RBP13.78□□□□□ -0.2
SDHA-216ENST00000514027 AOC3Q16853 763 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 HGSNATQ68CP4 663 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 CCDC70Q6NSX1 233 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 TATDN1Q6P1N9 297 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms