RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 GAP43P17677 238 aa16.56■□□□□ 0.24
VCAN-211ENST00000513984 IREB2P48200 963 aaKnown RBP16.56■□□□□ 0.24
VCAN-211ENST00000513984 MAN2A1Q16706 1144 aa16.56■□□□□ 0.24
VCAN-211ENST00000513984 ARHGEF16Q5VV41 709 aa16.56■□□□□ 0.24
VCAN-211ENST00000513984 USP50Q70EL3 339 aaPredicted RBP16.56■□□□□ 0.24
VCAN-211ENST00000513984 MIER3Q7Z3K6 550 aa16.56■□□□□ 0.24
VCAN-211ENST00000513984 ERGIC2Q96RQ1 377 aa16.56■□□□□ 0.24
VCAN-211ENST00000513984 OLFML3Q9NRN5 406 aa16.56■□□□□ 0.24
VCAN-211ENST00000513984 TBC1D22BQ9NU19 505 aa16.56■□□□□ 0.24
VCAN-211ENST00000513984 ABHD10Q9NUJ1 306 aa16.56■□□□□ 0.24
VCAN-211ENST00000513984 COL4A3BPQ9Y5P4 624 aa16.56■□□□□ 0.24
VCAN-211ENST00000513984 PES1O00541 588 aaKnown RBP16.55■□□□□ 0.24
VCAN-211ENST00000513984 ZSCAN12O43309 604 aa16.55■□□□□ 0.24
VCAN-211ENST00000513984 TBCAO75347 108 aaKnown RBP16.55■□□□□ 0.24
VCAN-211ENST00000513984 TBC1D8BQ0IIM8 1120 aa16.55■□□□□ 0.24
VCAN-211ENST00000513984 BMT2Q1RMZ1 405 aa16.55■□□□□ 0.24
VCAN-211ENST00000513984 EDRF1Q3B7T1 1238 aa16.55■□□□□ 0.24
VCAN-211ENST00000513984 MYRIPQ8NFW9 859 aa16.55■□□□□ 0.24
VCAN-211ENST00000513984 ZHX3Q9H4I2 956 aa16.55■□□□□ 0.24
VCAN-211ENST00000513984 ACAD9Q9H845 621 aa16.55■□□□□ 0.24
VCAN-211ENST00000513984 PPP2R2CQ9Y2T4 447 aa16.55■□□□□ 0.24
VCAN-211ENST00000513984 ARID2Q68CP9 1835 aa16.55■□□□□ 0.24
VCAN-211ENST00000513984 RSPH10B2B2RC85 870 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 RNF225M0QZC1 329 aaPredicted RBP16.54■□□□□ 0.24
VCAN-211ENST00000513984 DDX39AO00148 427 aaKnown RBP16.54■□□□□ 0.24
VCAN-211ENST00000513984 NKRFO15226 690 aaKnown RBP eCLIP16.54■□□□□ 0.24
VCAN-211ENST00000513984 TUBB4AP04350 444 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 P4HBP07237 508 aaKnown RBP16.54■□□□□ 0.24
VCAN-211ENST00000513984 RSPH10BP0C881 870 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 MYCLP12524 364 aaPredicted RBP16.54■□□□□ 0.24
VCAN-211ENST00000513984 CCND2P30279 289 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 CASP5P51878 434 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 VWA3BQ502W6 1294 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 DPY19L2Q6NUT2 758 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 REXO1L1PQ8IX06 675 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 NELFCDQ8IXH7 590 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 RETREG2Q8NC44 543 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 ZC3H15Q8WU90 426 aaKnown RBP16.54■□□□□ 0.24
VCAN-211ENST00000513984 NUP58Q9BVL2 599 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 TTYH3Q9C0H2 523 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 PAXBP1Q9Y5B6 917 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 TRAF5O00463 557 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 ZBTB39O15060 712 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 MARSP56192 900 aaKnown RBP16.54■□□□□ 0.24
VCAN-211ENST00000513984 FKBP15Q5T1M5 1219 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 VSIG10LQ86VR7 867 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 BANK1Q8NDB2 785 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 GPRASP2Q96D09 838 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 PURBQ96QR8 312 aaKnown RBP16.54■□□□□ 0.24
VCAN-211ENST00000513984 NDST4Q9H3R1 872 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 CYP39A1Q9NYL5 469 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 PKD2L1Q9P0L9 805 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 CAPN11Q9UMQ6 739 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 TRAF3IP3Q9Y228 551 aa16.54■□□□□ 0.24
VCAN-211ENST00000513984 ZC3H4Q9UPT8 1303 aaKnown RBP16.53■□□□□ 0.24
VCAN-211ENST00000513984 MYH9P35579 1960 aaKnown RBP16.53■□□□□ 0.24
VCAN-211ENST00000513984 UQCRHLA0A096LP55 91 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 TTC26A0AVF1 554 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 SOWAHDA6NJG2 315 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 LYPLA2O95372 231 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 GNA14O95837 355 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 UQCRHP07919 91 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 NR3C2P08235 984 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 KRT9P35527 623 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 ZNF131P52739 623 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 PPATQ06203 517 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 SYCP1Q15431 976 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 FIGNQ5HY92 759 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 TREML2Q5T2D2 321 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 TOGARAM2Q6ZUX3 1019 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 NSUN6Q8TEA1 469 aaKnown RBP16.53■□□□□ 0.24
VCAN-211ENST00000513984 CNKSR2Q8WXI2 1034 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 IQCDQ96DY2 449 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 CDCA5Q96FF9 252 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 DNAJC7Q99615 494 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 ZSWIM4Q9H7M6 989 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 A1CFQ9NQ94 594 aaKnown RBP16.53■□□□□ 0.24
VCAN-211ENST00000513984 SEL1LQ9UBV2 794 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 ODF2LQ9ULJ1 636 aa16.53■□□□□ 0.24
VCAN-211ENST00000513984 GOLGA6L9A6NEM1 432 aa16.52■□□□□ 0.24
VCAN-211ENST00000513984 EIF3DO15371 548 aaKnown RBP eCLIP16.52■□□□□ 0.24
VCAN-211ENST00000513984 FAM13AO94988 1023 aa16.52■□□□□ 0.24
VCAN-211ENST00000513984 GUCY2CP25092 1073 aa16.52■□□□□ 0.24
VCAN-211ENST00000513984 EPHX2P34913 555 aa16.52■□□□□ 0.24
VCAN-211ENST00000513984 KNOP1Q1ED39 458 aaKnown RBP16.52■□□□□ 0.24
VCAN-211ENST00000513984 RAD9BQ6WBX8 426 aa16.52■□□□□ 0.24
VCAN-211ENST00000513984 TMTC1Q8IUR5 882 aa16.52■□□□□ 0.24
VCAN-211ENST00000513984 PROCA1Q8NCQ7 364 aaPredicted RBP16.52■□□□□ 0.24
VCAN-211ENST00000513984 INPP4AQ96PE3 977 aaPredicted RBP16.52■□□□□ 0.24
VCAN-211ENST00000513984 LUC7L2Q9Y383 392 aaKnown RBP16.52■□□□□ 0.24
VCAN-211ENST00000513984 A0A0G2JLL6 359 aaPredicted RBP16.52■□□□□ 0.23
VCAN-211ENST00000513984 TESPA1A2RU30 521 aaPredicted RBP16.52■□□□□ 0.23
VCAN-211ENST00000513984 RASSF10A6NK89 507 aa16.52■□□□□ 0.23
VCAN-211ENST00000513984 PDXKO00764 312 aa16.52■□□□□ 0.23
VCAN-211ENST00000513984 MAFGO15525 162 aa16.52■□□□□ 0.23
VCAN-211ENST00000513984 MYBP10242 640 aa16.52■□□□□ 0.23
VCAN-211ENST00000513984 NF2P35240 595 aa16.52■□□□□ 0.23
VCAN-211ENST00000513984 GTF2F1P35269 517 aaKnown RBP eCLIP16.52■□□□□ 0.23
VCAN-211ENST00000513984 HOXD13P35453 343 aa16.52■□□□□ 0.23
VCAN-211ENST00000513984 JAK3P52333 1124 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms