RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 ZSCAN32Q9NX65 697 aa13.95□□□□□ -0.18
SFXN1-210ENST00000513725 PNMA2Q9UL42 364 aa13.95□□□□□ -0.18
SFXN1-210ENST00000513725 NOB1Q9ULX3 412 aaKnown RBP13.95□□□□□ -0.18
SFXN1-210ENST00000513725 MRVI1Q9Y6F6 885 aa13.95□□□□□ -0.18
SFXN1-210ENST00000513725 TMEM8BA6NDV4 472 aa13.94□□□□□ -0.18
SFXN1-210ENST00000513725 H3BRB1 525 aa13.94□□□□□ -0.18
SFXN1-210ENST00000513725 CHRNA1P02708 482 aa13.94□□□□□ -0.18
SFXN1-210ENST00000513725 CSTF1Q05048 431 aaKnown RBP13.94□□□□□ -0.18
SFXN1-210ENST00000513725 LPIN1Q14693 890 aa13.94□□□□□ -0.18
SFXN1-210ENST00000513725 SBK1Q52WX2 424 aa13.94□□□□□ -0.18
SFXN1-210ENST00000513725 RASGRP2Q7LDG7 609 aa13.94□□□□□ -0.18
SFXN1-210ENST00000513725 MRPS27Q92552 414 aaKnown RBP13.94□□□□□ -0.18
SFXN1-210ENST00000513725 C16orf70Q9BSU1 422 aa13.94□□□□□ -0.18
SFXN1-210ENST00000513725 TUT1Q9H6E5 874 aaKnown RBP13.94□□□□□ -0.18
SFXN1-210ENST00000513725 SPATA6Q9NWH7 488 aaPredicted RBP13.94□□□□□ -0.18
SFXN1-210ENST00000513725 RAB23Q9ULC3 237 aa13.94□□□□□ -0.18
SFXN1-210ENST00000513725 LRFN2Q9ULH4 789 aa13.94□□□□□ -0.18
SFXN1-210ENST00000513725 IGF2RP11717 2491 aa13.93□□□□□ -0.18
SFXN1-210ENST00000513725 SRRM3A6NNA2 597 aaPredicted RBP13.93□□□□□ -0.18
SFXN1-210ENST00000513725 MINDY4BA8MYZ0 360 aa13.93□□□□□ -0.18
SFXN1-210ENST00000513725 GOLIM4O00461 696 aa13.93□□□□□ -0.18
SFXN1-210ENST00000513725 LRP3O75074 770 aa13.93□□□□□ -0.18
SFXN1-210ENST00000513725 CCDC149Q6ZUS6 474 aa13.93□□□□□ -0.18
SFXN1-210ENST00000513725 PJA1Q8NG27 643 aa13.93□□□□□ -0.18
SFXN1-210ENST00000513725 SPATA33Q96N06 139 aa13.93□□□□□ -0.18
SFXN1-210ENST00000513725 FTHL17Q9BXU8 183 aa13.93□□□□□ -0.18
SFXN1-210ENST00000513725 DZANK1Q9NVP4 752 aa13.93□□□□□ -0.18
SFXN1-210ENST00000513725 KIAA1217Q5T5P2 1943 aa13.93□□□□□ -0.18
SFXN1-210ENST00000513725 HELZ2Q9BYK8 2649 aaKnown RBP13.93□□□□□ -0.18
SFXN1-210ENST00000513725 LILRB5O75023 590 aa13.92□□□□□ -0.18
SFXN1-210ENST00000513725 TSPY3P0CV98 308 aa13.92□□□□□ -0.18
SFXN1-210ENST00000513725 TSPY8P0CW00 308 aa13.92□□□□□ -0.18
SFXN1-210ENST00000513725 ADD2P35612 726 aa13.92□□□□□ -0.18
SFXN1-210ENST00000513725 GATMP50440 423 aa13.92□□□□□ -0.18
SFXN1-210ENST00000513725 TMC7Q7Z402 723 aa13.92□□□□□ -0.18
SFXN1-210ENST00000513725 C12orf76Q8N812 135 aaPredicted RBP13.92□□□□□ -0.18
SFXN1-210ENST00000513725 LINC01599Q8WXQ3 324 aa13.92□□□□□ -0.18
SFXN1-210ENST00000513725 BCO2Q9BYV7 579 aa13.92□□□□□ -0.18
SFXN1-210ENST00000513725 ARHGEF3Q9NR81 526 aa13.92□□□□□ -0.18
SFXN1-210ENST00000513725 SETD4Q9NVD3 440 aa13.92□□□□□ -0.18
SFXN1-210ENST00000513725 ANKFY1Q9P2R3 1169 aa13.92□□□□□ -0.18
SFXN1-210ENST00000513725 DSPP15924 2871 aaKnown RBP13.92□□□□□ -0.18
SFXN1-210ENST00000513725 SMG1Q96Q15 3661 aaKnown RBP13.92□□□□□ -0.18
SFXN1-210ENST00000513725 FOXD2O60548 495 aaPredicted RBP13.91□□□□□ -0.18
SFXN1-210ENST00000513725 PRDM1O75626 825 aa13.91□□□□□ -0.18
SFXN1-210ENST00000513725 SRFP11831 508 aa13.91□□□□□ -0.18
SFXN1-210ENST00000513725 SCG2P13521 617 aa13.91□□□□□ -0.18
SFXN1-210ENST00000513725 GLULP15104 373 aa13.91□□□□□ -0.18
SFXN1-210ENST00000513725 PLCB3Q01970 1234 aa13.91□□□□□ -0.18
SFXN1-210ENST00000513725 POLA2Q14181 598 aa13.91□□□□□ -0.18
SFXN1-210ENST00000513725 HSDL1Q3SXM5 330 aa13.91□□□□□ -0.18
SFXN1-210ENST00000513725 PPP4R3BQ5MIZ7 849 aa13.91□□□□□ -0.18
SFXN1-210ENST00000513725 MYSM1Q5VVJ2 828 aa13.91□□□□□ -0.18
SFXN1-210ENST00000513725 TSHZ1Q6ZSZ6 1077 aa13.91□□□□□ -0.18
SFXN1-210ENST00000513725 RSPH3Q86UC2 560 aa13.91□□□□□ -0.18
SFXN1-210ENST00000513725 COLGALT1Q8NBJ5 622 aa13.91□□□□□ -0.18
SFXN1-210ENST00000513725 NEDD1Q8NHV4 660 aa13.91□□□□□ -0.18
SFXN1-210ENST00000513725 NSUN6Q8TEA1 469 aaKnown RBP13.91□□□□□ -0.18
SFXN1-210ENST00000513725 KIF12Q96FN5 646 aa13.91□□□□□ -0.18
SFXN1-210ENST00000513725 IWS1Q96ST2 819 aa13.91□□□□□ -0.18
SFXN1-210ENST00000513725 DNAJC2Q99543 621 aaKnown RBP13.91□□□□□ -0.18
SFXN1-210ENST00000513725 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.91□□□□□ -0.18
SFXN1-210ENST00000513725 BPTFQ12830 3046 aa13.9□□□□□ -0.18
SFXN1-210ENST00000513725 EIF3JO75822 258 aaKnown RBP13.9□□□□□ -0.18
SFXN1-210ENST00000513725 SMC1AQ14683 1233 aaKnown RBP13.9□□□□□ -0.18
SFXN1-210ENST00000513725 CCDC96Q2M329 555 aa13.9□□□□□ -0.18
SFXN1-210ENST00000513725 SLFNL1Q499Z3 407 aa13.9□□□□□ -0.18
SFXN1-210ENST00000513725 CCDC184Q52MB2 194 aa13.9□□□□□ -0.18
SFXN1-210ENST00000513725 FBXO47Q5MNV8 452 aa13.9□□□□□ -0.18
SFXN1-210ENST00000513725 LAIR1Q6GTX8 287 aa13.9□□□□□ -0.18
SFXN1-210ENST00000513725 DCLRE1AQ6PJP8 1040 aa13.9□□□□□ -0.18
SFXN1-210ENST00000513725 PRR23CQ6ZRP0 262 aa13.9□□□□□ -0.18
SFXN1-210ENST00000513725 RTN4RL1Q86UN2 441 aaPredicted RBP13.9□□□□□ -0.18
SFXN1-210ENST00000513725 SEMA4GQ9NTN9 838 aa13.9□□□□□ -0.18
SFXN1-210ENST00000513725 PLIN4Q96Q06 1357 aa13.9□□□□□ -0.18
SFXN1-210ENST00000513725 DENND4AQ7Z401 1863 aa13.9□□□□□ -0.18
SFXN1-210ENST00000513725 CLASP2O75122 1294 aaKnown RBP13.89□□□□□ -0.19
SFXN1-210ENST00000513725 RETP07949 1114 aa13.89□□□□□ -0.19
SFXN1-210ENST00000513725 LAG3P18627 525 aa13.89□□□□□ -0.19
SFXN1-210ENST00000513725 SLC16A2P36021 539 aa13.89□□□□□ -0.19
SFXN1-210ENST00000513725 ARHGAP4P98171 946 aa13.89□□□□□ -0.19
SFXN1-210ENST00000513725 KRT17Q04695 432 aa13.89□□□□□ -0.19
SFXN1-210ENST00000513725 MGAT3Q09327 533 aa13.89□□□□□ -0.19
SFXN1-210ENST00000513725 CELF3Q5SZQ8 465 aaKnown RBP13.89□□□□□ -0.19
SFXN1-210ENST00000513725 SYDE2Q5VT97 1194 aa13.89□□□□□ -0.19
SFXN1-210ENST00000513725 KANK3Q6NY19 840 aa13.89□□□□□ -0.19
SFXN1-210ENST00000513725 AACSQ86V21 672 aa13.89□□□□□ -0.19
SFXN1-210ENST00000513725 MRPL43Q8N983 215 aaKnown RBP13.89□□□□□ -0.19
SFXN1-210ENST00000513725 RGS22Q8NE09 1264 aa13.89□□□□□ -0.19
SFXN1-210ENST00000513725 GPR152Q8TDT2 470 aa13.89□□□□□ -0.19
SFXN1-210ENST00000513725 SHDQ96IW2 340 aa13.89□□□□□ -0.19
SFXN1-210ENST00000513725 FOXQ1Q9C009 403 aa13.89□□□□□ -0.19
SFXN1-210ENST00000513725 PCDHB7Q9Y5E2 793 aa13.89□□□□□ -0.19
SFXN1-210ENST00000513725 TBKBP1A7MCY6 615 aa13.88□□□□□ -0.19
SFXN1-210ENST00000513725 GDF9O60383 454 aa13.88□□□□□ -0.19
SFXN1-210ENST00000513725 SORBS3O60504 671 aa13.88□□□□□ -0.19
SFXN1-210ENST00000513725 CD52P31358 61 aa13.88□□□□□ -0.19
SFXN1-210ENST00000513725 RBM25P49756 843 aaKnown RBP13.88□□□□□ -0.19
SFXN1-210ENST00000513725 CSRP2Q16527 193 aa13.88□□□□□ -0.19
SFXN1-210ENST00000513725 TAF2Q6P1X5 1199 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms