RNA–Protein interactions for RNA: ENST00000512985.1

CDK7-209, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-209ENST00000512985 SWSAP1Q6NVH7 229 aa14.38□□□□□ -0.11
CDK7-209ENST00000512985 TRIM50Q86XT4 487 aa14.38□□□□□ -0.11
CDK7-209ENST00000512985 RETREG2Q8NC44 543 aa14.38□□□□□ -0.11
CDK7-209ENST00000512985 CAGE1Q8TC20 777 aa14.38□□□□□ -0.11
CDK7-209ENST00000512985 HIPK3Q9H422 1215 aa14.38□□□□□ -0.11
CDK7-209ENST00000512985 ZSCAN16Q9H4T2 348 aaPredicted RBP14.38□□□□□ -0.11
CDK7-209ENST00000512985 ZMYND8Q9ULU4 1186 aaPredicted RBP14.38□□□□□ -0.11
CDK7-209ENST00000512985 CEP131Q9UPN4 1083 aa14.38□□□□□ -0.11
CDK7-209ENST00000512985 STK24Q9Y6E0 443 aa14.38□□□□□ -0.11
CDK7-209ENST00000512985 TNRC18O15417 2968 aaPredicted RBP14.38□□□□□ -0.11
CDK7-209ENST00000512985 MKI67P46013 3256 aaKnown RBP14.38□□□□□ -0.11
CDK7-209ENST00000512985 POTEB3A0JP26 581 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 HBP1O60381 514 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 PARNO95453 639 aaKnown RBP14.37□□□□□ -0.11
CDK7-209ENST00000512985 TIMP1P01033 207 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 SYN1P17600 705 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 SYT1P21579 422 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 MARK3P27448 753 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 PPFIA1Q13136 1202 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 PTK7Q13308 1070 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 POTEBQ6S5H4 581 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 RSPH3Q86UC2 560 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 TMEM199Q8N511 208 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 NEK9Q8TD19 979 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 BBXQ8WY36 941 aaPredicted RBP14.37□□□□□ -0.11
CDK7-209ENST00000512985 UIMC1Q96RL1 719 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 TRPV6Q9H1D0 765 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 UNC45AQ9H3U1 944 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 NRBP2Q9NSY0 501 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 FOXD4L1Q9NU39 408 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 GABBR1Q9UBS5 961 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 TBX21Q9UL17 535 aa14.37□□□□□ -0.11
CDK7-209ENST00000512985 MAFBQ9Y5Q3 323 aaPredicted RBP14.37□□□□□ -0.11
CDK7-209ENST00000512985 COL1A2P08123 1366 aa14.36□□□□□ -0.11
CDK7-209ENST00000512985 DNAH12Q6ZR08 3092 aa14.36□□□□□ -0.11
CDK7-209ENST00000512985 DOCK5Q9H7D0 1870 aa14.36□□□□□ -0.11
CDK7-209ENST00000512985 KIF28PB7ZC32 967 aa14.36□□□□□ -0.11
CDK7-209ENST00000512985 PITPNM1O00562 1244 aa14.36□□□□□ -0.11
CDK7-209ENST00000512985 STX6O43752 255 aa14.36□□□□□ -0.11
CDK7-209ENST00000512985 CAND2O75155 1236 aa14.36□□□□□ -0.11
CDK7-209ENST00000512985 P4HBP07237 508 aaKnown RBP14.36□□□□□ -0.11
CDK7-209ENST00000512985 OR52Z1P0C646 297 aa14.36□□□□□ -0.11
CDK7-209ENST00000512985 TXKP42681 527 aa14.36□□□□□ -0.11
CDK7-209ENST00000512985 ZNF174Q15697 407 aa14.36□□□□□ -0.11
CDK7-209ENST00000512985 ZNF484Q5JVG2 852 aa14.36□□□□□ -0.11
CDK7-209ENST00000512985 GDF6Q6KF10 455 aaPredicted RBP14.36□□□□□ -0.11
CDK7-209ENST00000512985 TAF2Q6P1X5 1199 aa14.36□□□□□ -0.11
CDK7-209ENST00000512985 CCDC60Q8IWA6 550 aaPredicted RBP14.36□□□□□ -0.11
CDK7-209ENST00000512985 ERMNQ8TAM6 284 aa14.36□□□□□ -0.11
CDK7-209ENST00000512985 ATP8B4Q8TF62 1192 aa14.36□□□□□ -0.11
CDK7-209ENST00000512985 HAS1Q92839 578 aa14.36□□□□□ -0.11
CDK7-209ENST00000512985 RNPEPQ9H4A4 650 aa14.36□□□□□ -0.11
CDK7-209ENST00000512985 TTC12Q9H892 705 aaPredicted RBP14.36□□□□□ -0.11
CDK7-209ENST00000512985 TRMT13Q9NUP7 481 aaKnown RBP14.36□□□□□ -0.11
CDK7-209ENST00000512985 ALPK3Q96L96 1907 aa14.35□□□□□ -0.11
CDK7-209ENST00000512985 PSMC5P62195 406 aa14.35□□□□□ -0.11
CDK7-209ENST00000512985 PPIGQ13427 754 aaKnown RBP eCLIP14.35□□□□□ -0.11
CDK7-209ENST00000512985 PLCB4Q15147 1175 aa14.35□□□□□ -0.11
CDK7-209ENST00000512985 EPHA7Q15375 998 aa14.35□□□□□ -0.11
CDK7-209ENST00000512985 GRIK4Q16099 956 aa14.35□□□□□ -0.11
CDK7-209ENST00000512985 NCAPH2Q6IBW4 605 aa14.35□□□□□ -0.11
CDK7-209ENST00000512985 EXOC8Q8IYI6 725 aa14.35□□□□□ -0.11
CDK7-209ENST00000512985 MTMR9Q96QG7 549 aa14.35□□□□□ -0.11
CDK7-209ENST00000512985 DAXXQ9UER7 740 aaPredicted RBP14.35□□□□□ -0.11
CDK7-209ENST00000512985 TUBE1Q9UJT0 475 aa14.35□□□□□ -0.11
CDK7-209ENST00000512985 VAV3Q9UKW4 847 aa14.35□□□□□ -0.11
CDK7-209ENST00000512985 IGSF9BQ9UPX0 1349 aa14.35□□□□□ -0.11
CDK7-209ENST00000512985 TRIM43BA6NCK2 446 aa14.34□□□□□ -0.11
CDK7-209ENST00000512985 HOXC8P31273 242 aa14.34□□□□□ -0.11
CDK7-209ENST00000512985 RFC2P35250 354 aa14.34□□□□□ -0.11
CDK7-209ENST00000512985 PRPHP41219 470 aa14.34□□□□□ -0.11
CDK7-209ENST00000512985 QARSP47897 775 aaKnown RBP14.34□□□□□ -0.11
CDK7-209ENST00000512985 FPGSQ05932 587 aa14.34□□□□□ -0.11
CDK7-209ENST00000512985 HAUS3Q68CZ6 603 aa14.34□□□□□ -0.11
CDK7-209ENST00000512985 MFSD5Q6N075 450 aa14.34□□□□□ -0.11
CDK7-209ENST00000512985 B3GNT9Q6UX72 402 aa14.34□□□□□ -0.11
CDK7-209ENST00000512985 OTUD6AQ7L8S5 288 aa14.34□□□□□ -0.11
CDK7-209ENST00000512985 SH3RF1Q7Z6J0 888 aa14.34□□□□□ -0.11
CDK7-209ENST00000512985 RPUSD2Q8IZ73 545 aaKnown RBP14.34□□□□□ -0.11
CDK7-209ENST00000512985 LMBR1Q8WVP7 490 aa14.34□□□□□ -0.11
CDK7-209ENST00000512985 TRIM43Q96BQ3 446 aaPredicted RBP14.34□□□□□ -0.11
CDK7-209ENST00000512985 PCYT2Q99447 389 aa14.34□□□□□ -0.11
CDK7-209ENST00000512985 JPH2Q9BR39 696 aaPredicted RBP14.34□□□□□ -0.11
CDK7-209ENST00000512985 NOC4LQ9BVI4 516 aaKnown RBP14.34□□□□□ -0.11
CDK7-209ENST00000512985 PPP1R12CQ9BZL4 782 aa14.34□□□□□ -0.11
CDK7-209ENST00000512985 SETD4Q9NVD3 440 aa14.34□□□□□ -0.11
CDK7-209ENST00000512985 PPME1Q9Y570 386 aa14.34□□□□□ -0.11
CDK7-209ENST00000512985 M0QZ92 97 aa14.33□□□□□ -0.12
CDK7-209ENST00000512985 MAGEB2O15479 319 aa14.33□□□□□ -0.12
CDK7-209ENST00000512985 OATP04181 439 aa14.33□□□□□ -0.12
CDK7-209ENST00000512985 PFKMP08237 780 aa14.33□□□□□ -0.12
CDK7-209ENST00000512985 CYP2C9P11712 490 aa14.33□□□□□ -0.12
CDK7-209ENST00000512985 INSRRP14616 1297 aa14.33□□□□□ -0.12
CDK7-209ENST00000512985 TMOD1P28289 359 aa14.33□□□□□ -0.12
CDK7-209ENST00000512985 BMP8BP34820 402 aa14.33□□□□□ -0.12
CDK7-209ENST00000512985 MAGEA10P43363 369 aaPredicted RBP14.33□□□□□ -0.12
CDK7-209ENST00000512985 IGBP1P78318 339 aa14.33□□□□□ -0.12
CDK7-209ENST00000512985 PRKCEQ02156 737 aa14.33□□□□□ -0.12
CDK7-209ENST00000512985 PTGDRQ13258 359 aa14.33□□□□□ -0.12
CDK7-209ENST00000512985 XKR3Q5GH77 459 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms