RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 NOC3LQ8WTT2 800 aaKnown RBP10.62□□□□□ -0.71
MSH3-203ENST00000512531 DCAF4Q8WV16 495 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 CEP95Q96GE4 821 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 PAGE5Q96GU1 130 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 APBA2Q99767 749 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 DNAJC18Q9H819 358 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 KANSL2Q9H9L4 492 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 TXNRD2Q9NNW7 524 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 KCND1Q9NSA2 647 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 ZBTB21Q9ULJ3 1066 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 ZMYND8Q9ULU4 1186 aaPredicted RBP10.62□□□□□ -0.71
MSH3-203ENST00000512531 SYNPO2Q9UMS6 1093 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 RABGAP1Q9Y3P9 1069 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 A0A0C4DFX4 3053 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 COL6A3P12111 3177 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 CDK5RAP2Q96SN8 1893 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 SYNRGQ9UMZ2 1314 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 SIPA1L1O43166 1804 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 PNMA6FA0A0J9YX94 578 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 hCG_1642624A0A1W2PR95 340 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 FGFR1OPO95684 399 aaKnown RBP10.61□□□□□ -0.71
MSH3-203ENST00000512531 HOXC6P09630 235 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 GCFC2P16383 781 aaKnown RBP10.61□□□□□ -0.71
MSH3-203ENST00000512531 USP14P54578 494 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 TRIM14Q14142 442 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 PTPN14Q15678 1187 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 CCDC96Q2M329 555 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 SPECC1Q5M775 1068 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 TATDN1Q6P1N9 297 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 GPR142Q7Z601 462 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 PPFIBP1Q86W92 1011 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 HOMER1Q86YM7 354 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 FAM114A1Q8IWE2 563 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 STAG2Q8N3U4 1231 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 MYRIPQ8NFW9 859 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 SPATA20Q8TB22 786 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 CUL5Q93034 780 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 USB1Q9BQ65 265 aaKnown RBP10.61□□□□□ -0.71
MSH3-203ENST00000512531 UBE2OQ9C0C9 1292 aaKnown RBP10.61□□□□□ -0.71
MSH3-203ENST00000512531 CCSER1Q9C0I3 900 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 RIOX1Q9H6W3 641 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 MTMR10Q9NXD2 777 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 MAGEC2Q9UBF1 373 aaPredicted RBP10.61□□□□□ -0.71
MSH3-203ENST00000512531 PCDHA6Q9UN73 950 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 NOVA2Q9UNW9 492 aaKnown RBP10.61□□□□□ -0.71
MSH3-203ENST00000512531 NFE2L3Q9Y4A8 694 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 PCDHA8Q9Y5H6 950 aa10.61□□□□□ -0.71
MSH3-203ENST00000512531 BICDL2A1A5D9 508 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 SLC15A5A6NIM6 579 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 USP17L15C9J2P7 530 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 USP17L13C9JLJ4 530 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 USP17L11C9JVI0 530 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 USP17L18D6R9N7 530 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 USP17L22D6RA61 530 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 USP17L17D6RBQ6 530 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 USP17L19D6RCP7 530 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 USP17L20D6RJB6 530 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 CCNT1O60563 726 aaKnown RBP10.6□□□□□ -0.71
MSH3-203ENST00000512531 PDHBP11177 359 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 SKIP12755 728 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 TNNT1P13805 278 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 AFMP43652 599 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 GABPAQ06546 454 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 USP17L24Q0WX57 530 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 KCNB1Q14721 858 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 NCAPHQ15003 741 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 Q3C1V9 767 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 ZNF658Q5TYW1 1059 aaPredicted RBP10.6□□□□□ -0.71
MSH3-203ENST00000512531 TMEM179Q6ZVK1 233 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 SLC44A5Q8NCS7 719 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 ERCC4Q92889 916 aaPredicted RBP10.6□□□□□ -0.71
MSH3-203ENST00000512531 GPKOWQ92917 476 aaPredicted RBP eCLIP10.6□□□□□ -0.71
MSH3-203ENST00000512531 NAA15Q9BXJ9 866 aaKnown RBP10.6□□□□□ -0.71
MSH3-203ENST00000512531 KCNF1Q9H3M0 494 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 DISC1Q9NRI5 854 aa10.6□□□□□ -0.71
MSH3-203ENST00000512531 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.6□□□□□ -0.71
MSH3-203ENST00000512531 PSMA7O14818 248 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 JAG1P78504 1218 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 ATP2B2Q01814 1243 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 DPYDQ12882 1025 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 PAK1Q13153 545 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 INF2Q27J81 1249 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 CERKLQ49MI3 558 aaPredicted RBP10.59□□□□□ -0.71
MSH3-203ENST00000512531 MFSD14CQ5VZR4 134 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 SPECC1LQ69YQ0 1117 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 ISM2Q6H9L7 571 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 SH3RF1Q7Z6J0 888 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 VSTM4Q8IW00 320 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 PHTF2Q8N3S3 785 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 KIF18AQ8NI77 898 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 CACTINQ8WUQ7 758 aaKnown RBP10.59□□□□□ -0.71
MSH3-203ENST00000512531 IQCDQ96DY2 449 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 CCDC51Q96ER9 411 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 EPSTI1Q96J88 318 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 KIAA1683Q9H0B3 1180 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 PORCNQ9H237 461 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 SH2D4AQ9H788 454 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 NYAP2Q9P242 653 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 STK17AQ9UEE5 414 aa10.59□□□□□ -0.71
MSH3-203ENST00000512531 RWDD2AQ9UIY3 292 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms