RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 PCDHGC5Q9Y5F6 944 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 ZC3H4Q9UPT8 1303 aaKnown RBP10.16□□□□□ -0.78
CPNE4-210ENST00000512332 ZNF646O15015 1829 aaPredicted RBP10.16□□□□□ -0.78
CPNE4-210ENST00000512332 FAM196BA6NMK8 535 aa10.16□□□□□ -0.78
CPNE4-210ENST00000512332 OPLAHO14841 1288 aa10.16□□□□□ -0.78
CPNE4-210ENST00000512332 SLC16A3O15427 465 aaKnown RBP10.16□□□□□ -0.78
CPNE4-210ENST00000512332 MSH4O15457 936 aa10.16□□□□□ -0.78
CPNE4-210ENST00000512332 CALUO43852 315 aaPredicted RBP10.16□□□□□ -0.78
CPNE4-210ENST00000512332 N4BP1O75113 896 aaKnown RBP10.16□□□□□ -0.78
CPNE4-210ENST00000512332 RPS6KA5O75582 802 aa10.16□□□□□ -0.78
CPNE4-210ENST00000512332 EYA4O95677 639 aa10.16□□□□□ -0.78
CPNE4-210ENST00000512332 MUTP22033 750 aa10.16□□□□□ -0.78
CPNE4-210ENST00000512332 RPL13P26373 211 aaKnown RBP10.16□□□□□ -0.78
CPNE4-210ENST00000512332 TNFRSF8P28908 595 aa10.16□□□□□ -0.78
CPNE4-210ENST00000512332 PSMC6P62333 389 aa10.16□□□□□ -0.78
CPNE4-210ENST00000512332 NFIL3Q16649 462 aa10.16□□□□□ -0.78
CPNE4-210ENST00000512332 RBM26Q5T8P6 1007 aaKnown RBP10.16□□□□□ -0.78
CPNE4-210ENST00000512332 CCDC102AQ96A19 550 aa10.16□□□□□ -0.78
CPNE4-210ENST00000512332 REEP2Q9BRK0 252 aa10.16□□□□□ -0.78
CPNE4-210ENST00000512332 TYW1Q9NV66 732 aaKnown RBP10.16□□□□□ -0.78
CPNE4-210ENST00000512332 HERC5Q9UII4 1024 aaKnown RBP10.16□□□□□ -0.78
CPNE4-210ENST00000512332 PCDHAC2Q9Y5I4 1007 aa10.16□□□□□ -0.78
CPNE4-210ENST00000512332 MYH10P35580 1976 aa10.16□□□□□ -0.78
CPNE4-210ENST00000512332 GTPBP10A4D1E9 387 aaKnown RBP10.15□□□□□ -0.78
CPNE4-210ENST00000512332 RAD21O60216 631 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 CLSTN1O94985 981 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 SYF2O95926 243 aaKnown RBP10.15□□□□□ -0.78
CPNE4-210ENST00000512332 AFPP02771 609 aaKnown RBP10.15□□□□□ -0.78
CPNE4-210ENST00000512332 GAP43P17677 238 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 HOXD13P35453 343 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 EPS15P42566 896 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 HNRNPH2P55795 449 aaKnown RBP10.15□□□□□ -0.78
CPNE4-210ENST00000512332 C2orf54Q08AI8 447 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 KLHL30Q0D2K2 578 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 SHROOM1Q2M3G4 852 aaPredicted RBP10.15□□□□□ -0.78
CPNE4-210ENST00000512332 CFAP221Q4G0U5 840 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 GOLGA5Q8TBA6 731 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 TBC1D5Q92609 795 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 ZNF622Q969S3 477 aaKnown RBP eCLIP10.15□□□□□ -0.78
CPNE4-210ENST00000512332 HSD17B14Q9BPX1 270 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 SELENOOQ9BVL4 669 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 HDAC9Q9UKV0 1011 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 FAN1Q9Y2M0 1017 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 BRWD3Q6RI45 1802 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 IGLV3-22A0A075B6J6 115 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 GRID2IPA4D2P6 1211 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 H0YIN7 160 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 CES2O00748 559 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 ERCC3P19447 782 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 PRKCIP41743 596 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 CASP5P51878 434 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 PABPC4Q13310 644 aaKnown RBP eCLIP10.15□□□□□ -0.78
CPNE4-210ENST00000512332 ASIC2Q16515 512 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 CCDC181Q5TID7 509 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 CC2D2BQ6DHV5 1058 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 NFRKBQ6P4R8 1299 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 IRF2BP2Q7Z5L9 587 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 SFR1Q86XK3 245 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 CRACR2AQ9BSW2 395 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 LRRC1Q9BTT6 524 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 TUFT1Q9NNX1 390 aa10.15□□□□□ -0.78
CPNE4-210ENST00000512332 SCN9AQ15858 1988 aa10.15□□□□□ -0.79
CPNE4-210ENST00000512332 A0A087X0T9 212 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 EIF3DO15371 548 aaKnown RBP eCLIP10.14□□□□□ -0.79
CPNE4-210ENST00000512332 PRPF6O94906 941 aaKnown RBP10.14□□□□□ -0.79
CPNE4-210ENST00000512332 GDF11O95390 407 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 GH2P01242 217 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 FAM228BP0C875 321 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 XRCC5P13010 732 aaKnown RBP10.14□□□□□ -0.79
CPNE4-210ENST00000512332 UCHL3P15374 230 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 HSPA1LP34931 641 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 ACTN2P35609 894 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 GYS2P54840 703 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 RAD51AP2Q09MP3 1159 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 EMBQ6PCB8 327 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 ANKRD13CQ8N6S4 541 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 C7orf43Q8WVR3 580 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 CNKSR1Q969H4 720 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 EIF2AK1Q9BQI3 630 aaKnown RBP10.14□□□□□ -0.79
CPNE4-210ENST00000512332 ZHX3Q9H4I2 956 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 STIM2Q9P246 746 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 PRR12Q9ULL5 1215 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 RABGAP1Q9Y3P9 1069 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 A0A1W2PRG0 241 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 MEIS1O00470 390 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 PLA2G6O60733 806 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 MYBL2P10244 700 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 KLRC1P26715 233 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 PON1P27169 355 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 TNNT3P45378 269 aaPredicted RBP10.14□□□□□ -0.79
CPNE4-210ENST00000512332 LMAN1P49257 510 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 IKQ13123 557 aaPredicted RBP10.14□□□□□ -0.79
CPNE4-210ENST00000512332 PPP2R5CQ13362 524 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 RAPGEF1Q13905 1077 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 ZSCAN26Q16670 478 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 EXOC3L4Q17RC7 722 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 KIAA0753Q2KHM9 967 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 USH1GQ495M9 461 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 MEI1Q5TIA1 1274 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 OTOP1Q7RTM1 612 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms