RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 CYP2W1Q8TAV3 490 aa6.68□□□□□ -1.34
RNF4-217ENST00000511892 CAGE1Q8TC20 777 aa6.68□□□□□ -1.34
RNF4-217ENST00000511892 AFAP1L1Q8TED9 768 aa6.68□□□□□ -1.34
RNF4-217ENST00000511892 SENP7Q9BQF6 1050 aa6.68□□□□□ -1.34
RNF4-217ENST00000511892 AGXT2Q9BYV1 514 aa6.68□□□□□ -1.34
RNF4-217ENST00000511892 MTIF3Q9H2K0 278 aaKnown RBP6.68□□□□□ -1.34
RNF4-217ENST00000511892 NKX2-4Q9H2Z4 354 aa6.68□□□□□ -1.34
RNF4-217ENST00000511892 TUT1Q9H6E5 874 aaKnown RBP6.68□□□□□ -1.34
RNF4-217ENST00000511892 RIC8AQ9NPQ8 531 aa6.68□□□□□ -1.34
RNF4-217ENST00000511892 PCDHA6Q9UN73 950 aa6.68□□□□□ -1.34
RNF4-217ENST00000511892 NOD1Q9Y239 953 aa6.68□□□□□ -1.34
RNF4-217ENST00000511892 PCDHA8Q9Y5H6 950 aa6.68□□□□□ -1.34
RNF4-217ENST00000511892 UBIAD1Q9Y5Z9 338 aa6.68□□□□□ -1.34
RNF4-217ENST00000511892 SLC4A7Q9Y6M7 1214 aa6.68□□□□□ -1.34
RNF4-217ENST00000511892 TCF20Q9UGU0 1960 aaKnown RBP6.68□□□□□ -1.34
RNF4-217ENST00000511892 KIAA1671Q9BY89 1806 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 RALGAPA2Q2PPJ7 1873 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 GSTTP1A0A1W2PQM5 241 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 SMCO2A6NFE2 343 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 SPDYE3A6NKU9 549 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 ZBBXA8MT70 800 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 TREHO43280 583 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 GTPBP6O43824 516 aaPredicted RBP6.67□□□□□ -1.34
RNF4-217ENST00000511892 ARHGEF15O94989 841 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 ATP2A2P16615 1042 aaKnown RBP6.67□□□□□ -1.34
RNF4-217ENST00000511892 RPS6KB1P23443 525 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 METAP2P50579 478 aaKnown RBP eCLIP6.67□□□□□ -1.34
RNF4-217ENST00000511892 NAPAP54920 295 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 RAB30Q15771 203 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 NTRK3Q16288 839 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 PKN1Q16512 942 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 UTP14CQ5TAP6 766 aaKnown RBP6.67□□□□□ -1.34
RNF4-217ENST00000511892 PPP1R18Q6NYC8 613 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 BLOC1S2Q6QNY1 142 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 LRRC8DQ7L1W4 858 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 NLRX1Q86UT6 975 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 SERINC5Q86VE9 423 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 TRIM50Q86XT4 487 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 CCDC155Q8N6L0 562 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 MAFAQ8NHW3 353 aaPredicted RBP6.67□□□□□ -1.34
RNF4-217ENST00000511892 BRF1Q92994 677 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 GPRASP2Q96D09 838 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 PGBD1Q96JS3 809 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 USP26Q9BXU7 913 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 OSBPL7Q9BZF2 842 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 FTOQ9C0B1 505 aaKnown RBP eCLIP6.67□□□□□ -1.34
RNF4-217ENST00000511892 RNPEPQ9H4A4 650 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 PRDM12Q9H4Q4 367 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 JADE2Q9NQC1 790 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 TMEM260Q9NX78 707 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 BARHL2Q9NY43 387 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 KIAA1468Q9P260 1216 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 SEPT9Q9UHD8 586 aaPredicted RBP6.67□□□□□ -1.34
RNF4-217ENST00000511892 MSRAQ9UJ68 235 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 PCDHA11Q9Y5I1 949 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 TTC3P53804 2025 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 C5orf42Q9H799 3197 aa6.67□□□□□ -1.34
RNF4-217ENST00000511892 MYO7AQ13402 2215 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 C17orf102A2RUQ5 167 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 PPP1R3GB7ZBB8 358 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 NOP56O00567 594 aaKnown RBP6.66□□□□□ -1.34
RNF4-217ENST00000511892 REC8O95072 547 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 ARP10275 920 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 ACTN1P12814 892 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 THPOP40225 353 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 ADCY7P51828 1080 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 EVCP57679 992 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 WDR5P61964 334 aaKnown RBP6.66□□□□□ -1.34
RNF4-217ENST00000511892 ADAM17P78536 824 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 DEFB103AP81534 67 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 FGD1P98174 961 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 SP4Q02446 784 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 ITGB3BPQ13352 177 aaPredicted RBP6.66□□□□□ -1.34
RNF4-217ENST00000511892 MTMR1Q13613 665 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 TOB2Q14106 344 aaPredicted RBP6.66□□□□□ -1.34
RNF4-217ENST00000511892 ADGRE1Q14246 886 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 PFKFB3Q16875 520 aaPredicted RBP6.66□□□□□ -1.34
RNF4-217ENST00000511892 CNKSR3Q6P9H4 555 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 Q6ZNB5 142 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 TMCO2Q7Z6W1 182 aaPredicted RBP6.66□□□□□ -1.34
RNF4-217ENST00000511892 HERC6Q8IVU3 1022 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 USP38Q8NB14 1042 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 GIMAP8Q8ND71 665 aaPredicted RBP6.66□□□□□ -1.34
RNF4-217ENST00000511892 PHOSPHO2Q8TCD6 241 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 CRYGNQ8WXF5 182 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 ATP6V0A1Q93050 837 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 PHKBQ93100 1093 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 CDHR1Q96JP9 859 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 PCYT2Q99447 389 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 MXRA8Q9BRK3 442 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 KCNH7Q9NS40 1196 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 SETD4Q9NVD3 440 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 PKD2L1Q9P0L9 805 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 RABGEF1Q9UJ41 708 aa6.66□□□□□ -1.34
RNF4-217ENST00000511892 NAP1L2Q9ULW6 460 aaPredicted RBP6.66□□□□□ -1.34
RNF4-217ENST00000511892 FNDC1Q4ZHG4 1894 aaPredicted RBP6.65□□□□□ -1.34
RNF4-217ENST00000511892 CCDC196A0A1B0GTZ2 297 aa6.65□□□□□ -1.34
RNF4-217ENST00000511892 EPOPA6NHQ4 379 aa6.65□□□□□ -1.34
RNF4-217ENST00000511892 RSPH10B2B2RC85 870 aa6.65□□□□□ -1.34
RNF4-217ENST00000511892 hCG_1984214I3L0E3 225 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms