RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 TMEM87AQ8NBN3 555 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 FBLIM1Q8WUP2 373 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 KAZALD1Q96I82 304 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 FANCD2OSQ96PS1 177 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 SEMA6BQ9H3T3 888 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 DISC1Q9NRI5 854 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 HERC5Q9UII4 1024 aaKnown RBP8.28□□□□□ -1.08
NR1I3-229ENST00000511748 GJD2Q9UKL4 321 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 PHIPQ8WWQ0 1821 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 C19orf81C9J6K1 198 aa8.27□□□□□ -1.09
NR1I3-229ENST00000511748 GAS2O43903 313 aaKnown RBP8.27□□□□□ -1.09
NR1I3-229ENST00000511748 SYN1P17600 705 aa8.27□□□□□ -1.09
NR1I3-229ENST00000511748 PRDX5P30044 214 aa8.27□□□□□ -1.09
NR1I3-229ENST00000511748 HOXA7P31268 230 aaPredicted RBP8.27□□□□□ -1.09
NR1I3-229ENST00000511748 RGS2P41220 211 aa8.27□□□□□ -1.09
NR1I3-229ENST00000511748 RPS26P62854 115 aaKnown RBP8.27□□□□□ -1.09
NR1I3-229ENST00000511748 IRX3P78415 501 aaPredicted RBP8.27□□□□□ -1.09
NR1I3-229ENST00000511748 GSTO1P78417 241 aa8.27□□□□□ -1.09
NR1I3-229ENST00000511748 EXOSC9Q06265 439 aaKnown RBP8.27□□□□□ -1.09
NR1I3-229ENST00000511748 TSNAXIP1Q2TAA8 658 aa8.27□□□□□ -1.09
NR1I3-229ENST00000511748 HP1BP3Q5SSJ5 553 aaPredicted RBP8.27□□□□□ -1.09
NR1I3-229ENST00000511748 GPRC5AQ8NFJ5 357 aa8.27□□□□□ -1.09
NR1I3-229ENST00000511748 ASCC2Q9H1I8 757 aaPredicted RBP8.27□□□□□ -1.09
NR1I3-229ENST00000511748 TMOD4Q9NZQ9 345 aa8.27□□□□□ -1.09
NR1I3-229ENST00000511748 MYH2Q9UKX2 1941 aa8.27□□□□□ -1.09
NR1I3-229ENST00000511748 PFASO15067 1338 aa8.27□□□□□ -1.09
NR1I3-229ENST00000511748 HMX2A2RU54 273 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 DHX15O43143 795 aaKnown RBP8.26□□□□□ -1.09
NR1I3-229ENST00000511748 LDHCP07864 332 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 ASNSP08243 561 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 SLFN14P0C7P3 912 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 VAMP1P23763 118 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 MAP4P27816 1152 aaKnown RBP8.26□□□□□ -1.09
NR1I3-229ENST00000511748 CCNA1P78396 465 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 ID3Q02535 119 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 SPP2Q13103 211 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 ATP2B3Q16720 1220 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 TRIM42Q8IWZ5 723 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 SHISA5Q8N114 240 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 ANKRD44Q8N8A2 993 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 TRIB2Q92519 343 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 GUCD1Q96NT3 240 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 APBA2Q99767 749 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 RSRP1Q9BUV0 290 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 DHX36Q9H2U1 1008 aaKnown RBP8.26□□□□□ -1.09
NR1I3-229ENST00000511748 C7orf69Q9H7B7 122 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.26□□□□□ -1.09
NR1I3-229ENST00000511748 RAXQ9Y2V3 346 aa8.26□□□□□ -1.09
NR1I3-229ENST00000511748 GPR75-ASB3A0A0A6YYF3 556 aa8.25□□□□□ -1.09
NR1I3-229ENST00000511748 DCDC2CA8MYV0 355 aa8.25□□□□□ -1.09
NR1I3-229ENST00000511748 PF4P02776 101 aa8.25□□□□□ -1.09
NR1I3-229ENST00000511748 CAP2P40123 477 aa8.25□□□□□ -1.09
NR1I3-229ENST00000511748 IL15P40933 162 aaPredicted RBP8.25□□□□□ -1.09
NR1I3-229ENST00000511748 ASPAP45381 313 aa8.25□□□□□ -1.09
NR1I3-229ENST00000511748 SMAD3P84022 425 aaKnown RBP8.25□□□□□ -1.09
NR1I3-229ENST00000511748 RING1Q06587 406 aa8.25□□□□□ -1.09
NR1I3-229ENST00000511748 TREML2Q5T2D2 321 aa8.25□□□□□ -1.09
NR1I3-229ENST00000511748 MFSD14CQ5VZR4 134 aa8.25□□□□□ -1.09
NR1I3-229ENST00000511748 LRFN4Q6PJG9 635 aa8.25□□□□□ -1.09
NR1I3-229ENST00000511748 BEND4Q6ZU67 534 aa8.25□□□□□ -1.09
NR1I3-229ENST00000511748 C12orf40Q86WS4 652 aa8.25□□□□□ -1.09
NR1I3-229ENST00000511748 MAFAQ8NHW3 353 aaPredicted RBP8.25□□□□□ -1.09
NR1I3-229ENST00000511748 RHOVQ96L33 236 aa8.25□□□□□ -1.09
NR1I3-229ENST00000511748 ACSS3Q9H6R3 686 aa8.25□□□□□ -1.09
NR1I3-229ENST00000511748 KBTBD4Q9NVX7 518 aa8.25□□□□□ -1.09
NR1I3-229ENST00000511748 PCDHA4Q9UN74 947 aa8.25□□□□□ -1.09
NR1I3-229ENST00000511748 MROH7-TTC4A0A0A0MT08 1334 aa8.25□□□□□ -1.09
NR1I3-229ENST00000511748 NCOR1O75376 2440 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 DDTLA6NHG4 134 aaPredicted RBP8.24□□□□□ -1.09
NR1I3-229ENST00000511748 MINDY4BA8MYZ0 360 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 DNM1LO00429 736 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 DYNC1LI2O43237 492 aaPredicted RBP8.24□□□□□ -1.09
NR1I3-229ENST00000511748 NFICP08651 508 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 RAB6AP20340 208 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 CYP2B6P20813 491 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 GARTP22102 1010 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 NTF4P34130 210 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 USP11P51784 963 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 HMGCS2P54868 508 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 BACE1P56817 501 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 FANCCQ00597 558 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 TTLL4Q14679 1199 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 PPM1JQ5JR12 505 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 ATF7IPQ6VMQ6 1270 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 UBE3DQ7Z6J8 389 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 ZFPM1Q8IX07 1006 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 ARRDC4Q8NCT1 418 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 LPAR1Q92633 364 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 EZH1Q92800 747 aaPredicted RBP8.24□□□□□ -1.09
NR1I3-229ENST00000511748 TMEM74Q96NL1 305 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 FAM83CQ9BQN1 747 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 KCNF1Q9H3M0 494 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 CWC22Q9HCG8 908 aaKnown RBP8.24□□□□□ -1.09
NR1I3-229ENST00000511748 PI4KBQ9UBF8 816 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 STOML1Q9UBI4 398 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 HIF3AQ9Y2N7 669 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 DNAH12Q6ZR08 3092 aa8.24□□□□□ -1.09
NR1I3-229ENST00000511748 SPTBN5Q9NRC6 3674 aaKnown RBP8.23□□□□□ -1.09
NR1I3-229ENST00000511748 MAST2Q6P0Q8 1798 aa8.23□□□□□ -1.09
NR1I3-229ENST00000511748 PRUNE2Q8WUY3 3088 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms