RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 NKX1-1Q15270 411 aaPredicted RBP16.22■□□□□ 0.19
USP38-202ENST00000510377 NAALADL2Q58DX5 795 aa16.22■□□□□ 0.19
USP38-202ENST00000510377 TBC1D1Q86TI0 1168 aaPredicted RBP16.22■□□□□ 0.19
USP38-202ENST00000510377 KIAA0895Q8NCT3 520 aa16.22■□□□□ 0.19
USP38-202ENST00000510377 CELF4Q9BZC1 486 aaKnown RBP16.22■□□□□ 0.19
USP38-202ENST00000510377 EPN3Q9H201 632 aa16.22■□□□□ 0.19
USP38-202ENST00000510377 NOC2LQ9Y3T9 749 aaKnown RBP16.22■□□□□ 0.19
USP38-202ENST00000510377 TBC1D9BQ66K14 1250 aa16.22■□□□□ 0.19
USP38-202ENST00000510377 CD248Q9HCU0 757 aa16.22■□□□□ 0.19
USP38-202ENST00000510377 TTI1O43156 1089 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 SLC9A1P19634 815 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 COPB2P35606 906 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 CCDC174Q6PII3 467 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 CAPN12Q6ZSI9 719 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 SFR1Q86XK3 245 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 GLIS3Q8NEA6 775 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 PBKQ96KB5 322 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 TRIM51Q9BSJ1 452 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 BHMT2Q9H2M3 363 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 CAMTA2O94983 1202 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 AARSP49588 968 aaKnown RBP eCLIP16.21■□□□□ 0.19
USP38-202ENST00000510377 PLCB3Q01970 1234 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 NFAT5O94916 1531 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 FAM196BA6NMK8 535 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 NTSR2O95665 410 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 KRT5P13647 590 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 C3orf67Q6ZVT6 689 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 SLC4A9Q96Q91 983 aa16.21■□□□□ 0.19
USP38-202ENST00000510377 NEBLO76041 1014 aa16.21■□□□□ 0.18
USP38-202ENST00000510377 CETN2P41208 172 aa16.21■□□□□ 0.18
USP38-202ENST00000510377 PSMD2Q13200 908 aa16.21■□□□□ 0.18
USP38-202ENST00000510377 SNX1Q13596 522 aa16.21■□□□□ 0.18
USP38-202ENST00000510377 SLC18A3Q16572 532 aa16.21■□□□□ 0.18
USP38-202ENST00000510377 TTBK2Q6IQ55 1244 aa16.21■□□□□ 0.18
USP38-202ENST00000510377 TXNRD3Q86VQ6 643 aa16.21■□□□□ 0.18
USP38-202ENST00000510377 ZNF507Q8TCN5 953 aa16.21■□□□□ 0.18
USP38-202ENST00000510377 PLVAPQ9BX97 442 aa16.21■□□□□ 0.18
USP38-202ENST00000510377 TLR10Q9BXR5 811 aa16.21■□□□□ 0.18
USP38-202ENST00000510377 NKIRAS1Q9NYS0 192 aa16.21■□□□□ 0.18
USP38-202ENST00000510377 MAD2L2Q9UI95 211 aa16.21■□□□□ 0.18
USP38-202ENST00000510377 SLC37A4O43826 429 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 TNIP1Q15025 636 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 FAM186BQ8IYM0 893 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 AENQ8WTP8 325 aaKnown RBP16.2■□□□□ 0.18
USP38-202ENST00000510377 CHUKO15111 745 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 CTNNA2P26232 953 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 PHLDB2Q86SQ0 1253 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 PIGOQ8TEQ8 1089 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 KLC4Q9NSK0 619 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 PPP2R2AP63151 447 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 DR1Q01658 176 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 SP4Q02446 784 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 FUT2Q10981 343 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 CUL1Q13616 776 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 TMEM132AQ24JP5 1023 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 CCDC38Q502W7 563 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 GLYCTKQ8IVS8 523 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 SPICE1Q8N0Z3 855 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 MDM1Q8TC05 714 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 MICAL1Q8TDZ2 1067 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 FAM114A2Q9NRY5 505 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 HAUS2Q9NVX0 235 aa16.2■□□□□ 0.18
USP38-202ENST00000510377 CCDC169A6NNP5 214 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 USP17L10C9JJH3 530 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 SLC20A2Q08357 652 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 GRB10Q13322 594 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 VSIG1Q86XK7 387 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 THOC1Q96FV9 657 aaKnown RBP16.19■□□□□ 0.18
USP38-202ENST00000510377 NCAPGQ9BPX3 1015 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 VEZTQ9HBM0 779 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 BZW2Q9Y6E2 419 aaKnown RBP16.19■□□□□ 0.18
USP38-202ENST00000510377 ARHGEF35A5YM69 484 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 MMEP08473 750 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 LACTBP83111 547 aaPredicted RBP16.19■□□□□ 0.18
USP38-202ENST00000510377 NEDD9Q14511 834 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 TRIP13Q15645 432 aaPredicted RBP16.19■□□□□ 0.18
USP38-202ENST00000510377 PTGISQ16647 500 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 DOK7Q18PE1 504 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 TTMPQ5BVD1 217 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 INTS8Q75QN2 995 aaKnown RBP16.19■□□□□ 0.18
USP38-202ENST00000510377 BICD1Q96G01 975 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 CCDC77Q9BR77 488 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 PCIF1Q9H4Z3 704 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 TMOD2Q9NZR1 351 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 TBK1Q9UHD2 729 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 LTN1O94822 1766 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 KLRC4O43908 158 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 HOXA13P31271 388 aaPredicted RBP16.19■□□□□ 0.18
USP38-202ENST00000510377 MEA1Q16626 185 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 KLHDC7AQ5VTJ3 777 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 FAM178BQ8IXR5 827 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 PLCB1Q9NQ66 1216 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 USTQ9Y2C2 406 aa16.19■□□□□ 0.18
USP38-202ENST00000510377 A0A1W2PQJ5 194 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 SSU72P8A0A1W2PR75 194 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 PTK2Q05397 1052 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 TRADDQ15628 312 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 RABGAP1Q9Y3P9 1069 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.18■□□□□ 0.18
USP38-202ENST00000510377 EIF4E1BA6NMX2 242 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms