RNA–Protein interactions for RNA: ENST00000509281.1

SNX2-208, Transcript of sorting nexin 2, human

TSL 3

Gene SNX2, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX2-208	ENST00000509281	LSM12	Q3MHD2	195 aa	Known RBP	4.93	□□□□□ -1.62
SNX2-208	ENST00000509281	NRN1L	Q496H8	165 aa		4.93	□□□□□ -1.62
SNX2-208	ENST00000509281	ZKSCAN2	Q63HK3	967 aa		4.93	□□□□□ -1.62
SNX2-208	ENST00000509281	EXOC2	Q96KP1	924 aa		4.93	□□□□□ -1.62
SNX2-208	ENST00000509281	SNTG2	Q9NY99	539 aa		4.93	□□□□□ -1.62
SNX2-208	ENST00000509281	DTL	Q9NZJ0	730 aa		4.93	□□□□□ -1.62
SNX2-208	ENST00000509281	MYOT	Q9UBF9	498 aa		4.93	□□□□□ -1.62
SNX2-208	ENST00000509281	RBPJL	Q9UBG7	517 aa		4.93	□□□□□ -1.62
SNX2-208	ENST00000509281	SLC27A2	O14975	620 aa		4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	LRG1	P02750	347 aa		4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	LTF	P02788	710 aa		4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	C6orf222	P0C671	652 aa	Predicted RBP	4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	COL6A2	P12110	1019 aa		4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	MRPS21	P82921	87 aa	Known RBP	4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	CHRNA2	Q15822	529 aa		4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	PRR31	Q5SQ13	230 aa		4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	TEPP	Q6URK8	271 aa		4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	IFNL3	Q8IZI9	196 aa		4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	KY	Q8NBH2	561 aa		4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	ARMC5	Q96C12	935 aa		4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	LCOR	Q96JN0	433 aa	Predicted RBP	4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	ZSWIM3	Q96MP5	696 aa		4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	DEPDC7	Q96QD5	511 aa		4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	KCNJ15	Q99712	375 aa		4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	HIRIP3	Q9BW71	556 aa	Predicted RBP	4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	MEGF9	Q9H1U4	602 aa		4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	SMOC1	Q9H4F8	434 aa		4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	ASH2L	Q9UBL3	628 aa		4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	TELO2	Q9Y4R8	837 aa		4.92	□□□□□ -1.62
SNX2-208	ENST00000509281	TRBV23-1	A0A0A0MS06	115 aa		4.91	□□□□□ -1.62
SNX2-208	ENST00000509281	NKRF	O15226	690 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
SNX2-208	ENST00000509281	KIZ	Q2M2Z5	673 aa		4.91	□□□□□ -1.62
SNX2-208	ENST00000509281	HABP4	Q5JVS0	413 aa	Known RBP	4.91	□□□□□ -1.62
SNX2-208	ENST00000509281	OTOP3	Q7RTS5	596 aa		4.91	□□□□□ -1.62
SNX2-208	ENST00000509281	MRGPRG	Q86SM5	289 aa		4.91	□□□□□ -1.62
SNX2-208	ENST00000509281	ZC3H18	Q86VM9	953 aa	Known RBP	4.91	□□□□□ -1.62
SNX2-208	ENST00000509281	PROSER1	Q86XN7	944 aa		4.91	□□□□□ -1.62
SNX2-208	ENST00000509281	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
SNX2-208	ENST00000509281	CLEC4D	Q8WXI8	215 aa		4.91	□□□□□ -1.62
SNX2-208	ENST00000509281	MBD6	Q96DN6	1003 aa		4.91	□□□□□ -1.62
SNX2-208	ENST00000509281	TOE1	Q96GM8	510 aa	Known RBP	4.91	□□□□□ -1.62
SNX2-208	ENST00000509281	ZFYVE21	Q9BQ24	234 aa		4.91	□□□□□ -1.62
SNX2-208	ENST00000509281	CSRNP2	Q9H175	543 aa		4.91	□□□□□ -1.62
SNX2-208	ENST00000509281	IPPK	Q9H8X2	491 aa		4.91	□□□□□ -1.62
SNX2-208	ENST00000509281	SLC6A20	Q9NP91	592 aa		4.91	□□□□□ -1.62
SNX2-208	ENST00000509281	KDM2B	Q8NHM5	1336 aa		4.91	□□□□□ -1.62
SNX2-208	ENST00000509281	SOD2	P04179	222 aa		4.9	□□□□□ -1.63
SNX2-208	ENST00000509281	NKX3-2	P78367	333 aa		4.9	□□□□□ -1.63
SNX2-208	ENST00000509281	GRIN1	Q05586	938 aa		4.9	□□□□□ -1.63
SNX2-208	ENST00000509281	PRKD1	Q15139	912 aa	Predicted RBP	4.9	□□□□□ -1.63
SNX2-208	ENST00000509281	UHMK1	Q8TAS1	419 aa	Known RBP	4.9	□□□□□ -1.63
SNX2-208	ENST00000509281	PMFBP1	Q8TBY8	1022 aa		4.9	□□□□□ -1.63
SNX2-208	ENST00000509281	PHOSPHO1	Q8TCT1	267 aa		4.9	□□□□□ -1.63
SNX2-208	ENST00000509281	LARP4B	Q92615	738 aa	Known RBP	4.9	□□□□□ -1.63
SNX2-208	ENST00000509281	CDC6	Q99741	560 aa		4.9	□□□□□ -1.63
SNX2-208	ENST00000509281	YIPF4	Q9BSR8	244 aa		4.9	□□□□□ -1.63
SNX2-208	ENST00000509281	TCRBV5S4A2T	A0A5A2	114 aa		4.89	□□□□□ -1.63
SNX2-208	ENST00000509281	C9orf118	A6NHY6	69 aa		4.89	□□□□□ -1.63
SNX2-208	ENST00000509281	PROB1	E7EW31	1015 aa		4.89	□□□□□ -1.63
SNX2-208	ENST00000509281	KRIT1	O00522	736 aa		4.89	□□□□□ -1.63
SNX2-208	ENST00000509281	GNAT1	P11488	350 aa		4.89	□□□□□ -1.63
SNX2-208	ENST00000509281	SUMO1	P63165	101 aa	Known RBP	4.89	□□□□□ -1.63
SNX2-208	ENST00000509281	TUSC3	Q13454	348 aa		4.89	□□□□□ -1.63
SNX2-208	ENST00000509281	USP39	Q53GS9	565 aa	Known RBP	4.89	□□□□□ -1.63
SNX2-208	ENST00000509281	CYP4F22	Q6NT55	531 aa		4.89	□□□□□ -1.63
SNX2-208	ENST00000509281	TMC5	Q6UXY8	1006 aa		4.89	□□□□□ -1.63
SNX2-208	ENST00000509281	TTLL6	Q8N841	843 aa		4.89	□□□□□ -1.63
SNX2-208	ENST00000509281	SH3RF2	Q8TEC5	729 aa		4.89	□□□□□ -1.63
SNX2-208	ENST00000509281	DNAJC2	Q99543	621 aa	Known RBP	4.89	□□□□□ -1.63
SNX2-208	ENST00000509281	DNAJC7	Q99615	494 aa		4.89	□□□□□ -1.63
SNX2-208	ENST00000509281	MRPS23	Q9Y3D9	190 aa	Known RBP	4.89	□□□□□ -1.63
SNX2-208	ENST00000509281	DDX3X	O00571	662 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
SNX2-208	ENST00000509281	PLSCR1	O15162	318 aa		4.88	□□□□□ -1.63
SNX2-208	ENST00000509281	ZNF28	P17035	718 aa		4.88	□□□□□ -1.63
SNX2-208	ENST00000509281	PPP2CB	P62714	309 aa		4.88	□□□□□ -1.63
SNX2-208	ENST00000509281	PPP2CA	P67775	309 aa		4.88	□□□□□ -1.63
SNX2-208	ENST00000509281	PHF19	Q5T6S3	580 aa		4.88	□□□□□ -1.63
SNX2-208	ENST00000509281	SLFN13	Q68D06	897 aa		4.88	□□□□□ -1.63
SNX2-208	ENST00000509281	PKN3	Q6P5Z2	889 aa		4.88	□□□□□ -1.63
SNX2-208	ENST00000509281	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.88	□□□□□ -1.63
SNX2-208	ENST00000509281	TTLL11	Q8NHH1	800 aa		4.88	□□□□□ -1.63
SNX2-208	ENST00000509281	PTPRN2	Q92932	1015 aa		4.88	□□□□□ -1.63
SNX2-208	ENST00000509281	SRPK1	Q96SB4	655 aa	Known RBP	4.88	□□□□□ -1.63
SNX2-208	ENST00000509281	DHRS4	Q9BTZ2	278 aa		4.88	□□□□□ -1.63
SNX2-208	ENST00000509281	CD244	Q9BZW8	370 aa		4.88	□□□□□ -1.63
SNX2-208	ENST00000509281	PCDH18	Q9HCL0	1135 aa		4.88	□□□□□ -1.63
SNX2-208	ENST00000509281	NGRN	Q9NPE2	291 aa	Known RBP	4.88	□□□□□ -1.63
SNX2-208	ENST00000509281	PCDHA8	Q9Y5H6	950 aa		4.88	□□□□□ -1.63
SNX2-208	ENST00000509281	FAM47E-STBD1	D6RA91	191 aa		4.87	□□□□□ -1.63
SNX2-208	ENST00000509281	ACOT7	O00154	380 aa		4.87	□□□□□ -1.63
SNX2-208	ENST00000509281	MAFK	O60675	156 aa		4.87	□□□□□ -1.63
SNX2-208	ENST00000509281	MLLT6	P55198	1093 aa	Predicted RBP	4.87	□□□□□ -1.63
SNX2-208	ENST00000509281	SPIRE1	Q08AE8	756 aa		4.87	□□□□□ -1.63
SNX2-208	ENST00000509281	PAN2	Q504Q3	1202 aa	Known RBP	4.87	□□□□□ -1.63
SNX2-208	ENST00000509281	ZNF627	Q7L945	461 aa		4.87	□□□□□ -1.63
SNX2-208	ENST00000509281	LRP10	Q7Z4F1	713 aa		4.87	□□□□□ -1.63
SNX2-208	ENST00000509281	MTDH	Q86UE4	582 aa	Known RBP	4.87	□□□□□ -1.63
SNX2-208	ENST00000509281	JMY	Q8N9B5	988 aa		4.87	□□□□□ -1.63
SNX2-208	ENST00000509281	PCDH19	Q8TAB3	1148 aa		4.87	□□□□□ -1.63

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