RNA–Protein interactions for RNA: ENST00000509281.1

SNX2-208, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-208ENST00000509281 AEBP2Q6ZN18 517 aaPredicted RBP30.02■■■□□ 2.4
SNX2-208ENST00000509281 CHIC1Q5VXU3 224 aa27.87■■■□□ 2.05
SNX2-208ENST00000509281 SENP3Q9H4L4 574 aaPredicted RBP25.66■■□□□ 1.7
SNX2-208ENST00000509281 PHF23Q9BUL5 403 aaPredicted RBP25.18■■□□□ 1.62
SNX2-208ENST00000509281 POTEDQ86YR6 584 aa24.48■■□□□ 1.51
SNX2-208ENST00000509281 FOXD1Q16676 465 aa24.13■■□□□ 1.45
SNX2-208ENST00000509281 MSH5O43196 834 aa22.95■■□□□ 1.26
SNX2-208ENST00000509281 PIAS4Q8N2W9 510 aaPredicted RBP22.2■■□□□ 1.14
SNX2-208ENST00000509281 PPP6R1Q9UPN7 881 aa21.69■■□□□ 1.06
SNX2-208ENST00000509281 ADRA2BP18089 450 aa21.49■■□□□ 1.03
SNX2-208ENST00000509281 PLPPR3Q6T4P5 718 aa21.2■□□□□ 0.98
SNX2-208ENST00000509281 CACNB1Q02641 598 aaPredicted RBP20.37■□□□□ 0.85
SNX2-208ENST00000509281 DMRT2Q9Y5R5 561 aa20.22■□□□□ 0.83
SNX2-208ENST00000509281 MAPK8IP2Q13387 824 aaPredicted RBP20.11■□□□□ 0.81
SNX2-208ENST00000509281 RNF39Q9H2S5 420 aa19.54■□□□□ 0.72
SNX2-208ENST00000509281 SCAF1Q9H7N4 1312 aaKnown RBP19.52■□□□□ 0.72
SNX2-208ENST00000509281 DCAF8L1A6NGE4 600 aa19.3■□□□□ 0.68
SNX2-208ENST00000509281 C1QBPQ07021 282 aaKnown RBP19.12■□□□□ 0.65
SNX2-208ENST00000509281 HOXD11P31277 338 aaPredicted RBP19.03■□□□□ 0.64
SNX2-208ENST00000509281 POTEHQ6S545 545 aa18.91■□□□□ 0.62
SNX2-208ENST00000509281 DNAJC5BQ9UF47 199 aa18.58■□□□□ 0.56
SNX2-208ENST00000509281 RNF216Q9NWF9 866 aaPredicted RBP18.52■□□□□ 0.56
SNX2-208ENST00000509281 PPP4R3CPQ6ZMV5 832 aa18.46■□□□□ 0.55
SNX2-208ENST00000509281 CNKSR2Q8WXI2 1034 aa18.37■□□□□ 0.53
SNX2-208ENST00000509281 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.99■□□□□ 0.471e-7■□□□□ 10.1
SNX2-208ENST00000509281 DSG3P32926 999 aa17.9■□□□□ 0.46
SNX2-208ENST00000509281 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
SNX2-208ENST00000509281 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
SNX2-208ENST00000509281 CAPN15O75808 1086 aa17.62■□□□□ 0.41
SNX2-208ENST00000509281 NCBP3Q53F19 620 aaKnown RBP17.29■□□□□ 0.36
SNX2-208ENST00000509281 NPM3O75607 178 aaKnown RBP17.18■□□□□ 0.34
SNX2-208ENST00000509281 SP7Q8TDD2 431 aaPredicted RBP17.18■□□□□ 0.34
SNX2-208ENST00000509281 ABCB7O75027 752 aa17.17■□□□□ 0.34
SNX2-208ENST00000509281 CHRDL2Q6WN34 429 aa17.16■□□□□ 0.34
SNX2-208ENST00000509281 TRHP20396 242 aaPredicted RBP17.07■□□□□ 0.32
SNX2-208ENST00000509281 RBM42Q9BTD8 480 aaKnown RBP17.01■□□□□ 0.31
SNX2-208ENST00000509281 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
SNX2-208ENST00000509281 APLP2Q06481 763 aa16.82■□□□□ 0.28
SNX2-208ENST00000509281 SLC4A2P04920 1241 aa16.77■□□□□ 0.28
SNX2-208ENST00000509281 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
SNX2-208ENST00000509281 HNRNPUL2Q1KMD3 747 aaKnown RBP16.55■□□□□ 0.24
SNX2-208ENST00000509281 PIP4P2Q8N4L2 257 aa16.54■□□□□ 0.24
SNX2-208ENST00000509281 HAX1O00165 279 aa16.44■□□□□ 0.22
SNX2-208ENST00000509281 SAMD1Q6SPF0 538 aaPredicted RBP16.44■□□□□ 0.22
SNX2-208ENST00000509281 AKT1S1Q96B36 256 aa16.41■□□□□ 0.22
SNX2-208ENST00000509281 POLA2Q14181 598 aa16.36■□□□□ 0.21
SNX2-208ENST00000509281 EVX2Q03828 476 aa16.31■□□□□ 0.2
SNX2-208ENST00000509281 REM2Q8IYK8 340 aaPredicted RBP16.28■□□□□ 0.2
SNX2-208ENST00000509281 FXR2P51116 673 aaKnown RBP eCLIP16.25■□□□□ 0.19
SNX2-208ENST00000509281 PITPNM1O00562 1244 aa16.16■□□□□ 0.18
SNX2-208ENST00000509281 LHX8Q68G74 356 aa16.06■□□□□ 0.16
SNX2-208ENST00000509281 PLSCR2Q9NRY7 297 aa15.97■□□□□ 0.15
SNX2-208ENST00000509281 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
SNX2-208ENST00000509281 ZBTB12Q9Y330 459 aaPredicted RBP15.89■□□□□ 0.13
SNX2-208ENST00000509281 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
SNX2-208ENST00000509281 KCNA4P22459 653 aa15.82■□□□□ 0.12
SNX2-208ENST00000509281 GABBR2O75899 941 aa15.8■□□□□ 0.12
SNX2-208ENST00000509281 C19orf67A6NJJ6 358 aa15.78■□□□□ 0.12
SNX2-208ENST00000509281 ATF5Q9Y2D1 282 aaPredicted RBP15.69■□□□□ 0.1
SNX2-208ENST00000509281 PRKAR2AP13861 404 aaKnown RBP15.67■□□□□ 0.1
SNX2-208ENST00000509281 POTEIP0CG38 1075 aa15.55■□□□□ 0.08
SNX2-208ENST00000509281 SPDYE2BA6NHP3 402 aa15.36■□□□□ 0.05
SNX2-208ENST00000509281 SPDYE6P0CI01 402 aa15.36■□□□□ 0.05
SNX2-208ENST00000509281 SPDYE2Q495Y8 402 aa15.36■□□□□ 0.05
SNX2-208ENST00000509281 CLEC11AQ9Y240 323 aa15.35■□□□□ 0.05
SNX2-208ENST00000509281 SPDYE1Q8NFV5 336 aaPredicted RBP15.34■□□□□ 0.05
SNX2-208ENST00000509281 CHADLQ6NUI6 762 aa15.27■□□□□ 0.04
SNX2-208ENST00000509281 POTEMA6NI47 508 aa15.2■□□□□ 0.02
SNX2-208ENST00000509281 OTUD5Q96G74 571 aa15.15■□□□□ 0.02
SNX2-208ENST00000509281 POTEGQ6S5H5 508 aa15.11■□□□□ 0.01
SNX2-208ENST00000509281 CD44P16070 742 aaKnown RBP15.1■□□□□ 0.01
SNX2-208ENST00000509281 SSUH2Q9Y2M2 353 aa15.1■□□□□ 0.01
SNX2-208ENST00000509281 FOXD4L1Q9NU39 408 aa15.09■□□□□ 0.01
SNX2-208ENST00000509281 CLCN6P51797 869 aa15.06■□□□□ 0
SNX2-208ENST00000509281 DCBLD2Q96PD2 775 aa15.04■□□□□ -0
SNX2-208ENST00000509281 POTEB2H3BUK9 544 aa15.01□□□□□ -0.01
SNX2-208ENST00000509281 FBLN2P98095 1184 aa14.98□□□□□ -0.01
SNX2-208ENST00000509281 PCDH10Q9P2E7 1040 aa14.95□□□□□ -0.02
SNX2-208ENST00000509281 ZNF692Q9BU19 519 aaPredicted RBP14.94□□□□□ -0.02
SNX2-208ENST00000509281 PRR29P0C7W0 189 aa14.93□□□□□ -0.02
SNX2-208ENST00000509281 MKRN4PQ13434 485 aaPredicted RBP14.92□□□□□ -0.02
SNX2-208ENST00000509281 FARP1Q9Y4F1 1045 aaPredicted RBP14.91□□□□□ -0.02
SNX2-208ENST00000509281 ZNF579Q8NAF0 562 aaKnown RBP14.86□□□□□ -0.03
SNX2-208ENST00000509281 GALR2O43603 387 aaPredicted RBP14.77□□□□□ -0.05
SNX2-208ENST00000509281 LCE2DQ5TA82 110 aaPredicted RBP14.77□□□□□ -0.05
SNX2-208ENST00000509281 PABPN1Q86U42 306 aaKnown RBP eCLIP14.72□□□□□ -0.05
SNX2-208ENST00000509281 ATXN8OSP0DMR3 200 aa14.7□□□□□ -0.06
SNX2-208ENST00000509281 ZRANB1Q9UGI0 708 aa14.69□□□□□ -0.06
SNX2-208ENST00000509281 PELP1Q8IZL8 1130 aaKnown RBP14.62□□□□□ -0.07
SNX2-208ENST00000509281 SLC4A1APQ9BWU0 796 aaKnown RBP14.62□□□□□ -0.07
SNX2-208ENST00000509281 POTEJP0CG39 1038 aa14.61□□□□□ -0.07
SNX2-208ENST00000509281 ZBTB22O15209 634 aa14.59□□□□□ -0.07
SNX2-208ENST00000509281 METRNQ9UJH8 293 aa14.46□□□□□ -0.09
SNX2-208ENST00000509281 FAM163AQ96GL9 167 aaPredicted RBP14.45□□□□□ -0.1
SNX2-208ENST00000509281 PHF12Q96QT6 1004 aa14.44□□□□□ -0.1
SNX2-208ENST00000509281 CREBZFQ9NS37 354 aa14.4□□□□□ -0.1
SNX2-208ENST00000509281 MAMSTRQ6ZN01 415 aa14.39□□□□□ -0.11
SNX2-208ENST00000509281 ASTLQ6HA08 431 aaPredicted RBP14.38□□□□□ -0.11
SNX2-208ENST00000509281 SLC39A7Q92504 469 aa14.35□□□□□ -0.11
SNX2-208ENST00000509281 C7P10643 843 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 226.2 ms