RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 GDF6Q6KF10 455 aaPredicted RBP16.91■□□□□ 0.3
RNF4-210ENST00000508235 SWSAP1Q6NVH7 229 aa16.91■□□□□ 0.3
RNF4-210ENST00000508235 PDXDC2PQ6P474 469 aa16.91■□□□□ 0.3
RNF4-210ENST00000508235 MIER3Q7Z3K6 550 aa16.91■□□□□ 0.3
RNF4-210ENST00000508235 SH3RF1Q7Z6J0 888 aa16.91■□□□□ 0.3
RNF4-210ENST00000508235 HAS1Q92839 578 aa16.91■□□□□ 0.3
RNF4-210ENST00000508235 TRIM43Q96BQ3 446 aaPredicted RBP16.91■□□□□ 0.3
RNF4-210ENST00000508235 PCYT2Q99447 389 aa16.91■□□□□ 0.3
RNF4-210ENST00000508235 UNC45AQ9H3U1 944 aa16.91■□□□□ 0.3
RNF4-210ENST00000508235 HIPK3Q9H422 1215 aa16.91■□□□□ 0.3
RNF4-210ENST00000508235 RNPEPQ9H4A4 650 aa16.91■□□□□ 0.3
RNF4-210ENST00000508235 VPS37CA5D8V6 355 aaPredicted RBP16.9■□□□□ 0.3
RNF4-210ENST00000508235 CHMP2AO43633 222 aa16.9■□□□□ 0.3
RNF4-210ENST00000508235 MARK3P27448 753 aa16.9■□□□□ 0.3
RNF4-210ENST00000508235 PTK7Q13308 1070 aa16.9■□□□□ 0.3
RNF4-210ENST00000508235 BRAPQ7Z569 592 aa16.9■□□□□ 0.3
RNF4-210ENST00000508235 ATP6V0A1Q93050 837 aa16.9■□□□□ 0.3
RNF4-210ENST00000508235 GJA10Q969M2 543 aa16.9■□□□□ 0.3
RNF4-210ENST00000508235 FAM167AQ96KS9 214 aa16.9■□□□□ 0.3
RNF4-210ENST00000508235 FOXD4L1Q9NU39 408 aa16.9■□□□□ 0.3
RNF4-210ENST00000508235 PCDHA12Q9UN75 941 aa16.9■□□□□ 0.3
RNF4-210ENST00000508235 TRPC6Q9Y210 931 aa16.9■□□□□ 0.3
RNF4-210ENST00000508235 MAFBQ9Y5Q3 323 aaPredicted RBP16.9■□□□□ 0.3
RNF4-210ENST00000508235 TRIP12Q14669 1992 aaPredicted RBP16.89■□□□□ 0.3
RNF4-210ENST00000508235 POTEB3A0JP26 581 aa16.89■□□□□ 0.29
RNF4-210ENST00000508235 RRN3P2A6NIE6 340 aa16.89■□□□□ 0.29
RNF4-210ENST00000508235 HBP1O60381 514 aa16.89■□□□□ 0.29
RNF4-210ENST00000508235 DKC1O60832 514 aaKnown RBP eCLIP16.89■□□□□ 0.29
RNF4-210ENST00000508235 SYT1P21579 422 aa16.89■□□□□ 0.29
RNF4-210ENST00000508235 HOXC8P31273 242 aa16.89■□□□□ 0.29
RNF4-210ENST00000508235 PPFIA1Q13136 1202 aa16.89■□□□□ 0.29
RNF4-210ENST00000508235 BECN1Q14457 450 aa16.89■□□□□ 0.29
RNF4-210ENST00000508235 ZNF174Q15697 407 aa16.89■□□□□ 0.29
RNF4-210ENST00000508235 POTEBQ6S5H4 581 aa16.89■□□□□ 0.29
RNF4-210ENST00000508235 B3GNT9Q6UX72 402 aa16.89■□□□□ 0.29
RNF4-210ENST00000508235 CCDC60Q8IWA6 550 aaPredicted RBP16.89■□□□□ 0.29
RNF4-210ENST00000508235 CKAP2LQ8IYA6 745 aa16.89■□□□□ 0.29
RNF4-210ENST00000508235 TMEM199Q8N511 208 aa16.89■□□□□ 0.29
RNF4-210ENST00000508235 CAGE1Q8TC20 777 aa16.89■□□□□ 0.29
RNF4-210ENST00000508235 PPP1R13LQ8WUF5 828 aa16.89■□□□□ 0.29
RNF4-210ENST00000508235 BBXQ8WY36 941 aaPredicted RBP16.89■□□□□ 0.29
RNF4-210ENST00000508235 GABBR1Q9UBS5 961 aa16.89■□□□□ 0.29
RNF4-210ENST00000508235 VAV3Q9UKW4 847 aa16.89■□□□□ 0.29
RNF4-210ENST00000508235 TNRC18O15417 2968 aaPredicted RBP16.89■□□□□ 0.29
RNF4-210ENST00000508235 LAD1O00515 517 aa16.88■□□□□ 0.29
RNF4-210ENST00000508235 PITPNM1O00562 1244 aa16.88■□□□□ 0.29
RNF4-210ENST00000508235 OR52Z1P0C646 297 aa16.88■□□□□ 0.29
RNF4-210ENST00000508235 CYP2C9P11712 490 aa16.88■□□□□ 0.29
RNF4-210ENST00000508235 MAGEA10P43363 369 aaPredicted RBP16.88■□□□□ 0.29
RNF4-210ENST00000508235 PLCB4Q15147 1175 aa16.88■□□□□ 0.29
RNF4-210ENST00000508235 GRIK4Q16099 956 aa16.88■□□□□ 0.29
RNF4-210ENST00000508235 MFSD5Q6N075 450 aa16.88■□□□□ 0.29
RNF4-210ENST00000508235 RETREG2Q8NC44 543 aa16.88■□□□□ 0.29
RNF4-210ENST00000508235 ATP8B4Q8TF62 1192 aa16.88■□□□□ 0.29
RNF4-210ENST00000508235 LMBR1Q8WVP7 490 aa16.88■□□□□ 0.29
RNF4-210ENST00000508235 MTMR9Q96QG7 549 aa16.88■□□□□ 0.29
RNF4-210ENST00000508235 NOC4LQ9BVI4 516 aaKnown RBP16.88■□□□□ 0.29
RNF4-210ENST00000508235 PPP1R12CQ9BZL4 782 aa16.88■□□□□ 0.29
RNF4-210ENST00000508235 TTC12Q9H892 705 aaPredicted RBP16.88■□□□□ 0.29
RNF4-210ENST00000508235 SETD4Q9NVD3 440 aa16.88■□□□□ 0.29
RNF4-210ENST00000508235 CEP131Q9UPN4 1083 aa16.88■□□□□ 0.29
RNF4-210ENST00000508235 IGSF9BQ9UPX0 1349 aa16.88■□□□□ 0.29
RNF4-210ENST00000508235 WNT7AO00755 349 aa16.87■□□□□ 0.29
RNF4-210ENST00000508235 RPLP2P05387 115 aaKnown RBP16.87■□□□□ 0.29
RNF4-210ENST00000508235 TXKP42681 527 aa16.87■□□□□ 0.29
RNF4-210ENST00000508235 MDM2Q00987 491 aaPredicted RBP16.87■□□□□ 0.29
RNF4-210ENST00000508235 TMEM266Q2M3C6 531 aa16.87■□□□□ 0.29
RNF4-210ENST00000508235 TAF2Q6P1X5 1199 aa16.87■□□□□ 0.29
RNF4-210ENST00000508235 SERINC5Q86VE9 423 aa16.87■□□□□ 0.29
RNF4-210ENST00000508235 BADQ92934 168 aa16.87■□□□□ 0.29
RNF4-210ENST00000508235 GDF15Q99988 308 aa16.87■□□□□ 0.29
RNF4-210ENST00000508235 NRBP2Q9NSY0 501 aa16.87■□□□□ 0.29
RNF4-210ENST00000508235 COL1A2P08123 1366 aa16.87■□□□□ 0.29
RNF4-210ENST00000508235 STX6O43752 255 aa16.86■□□□□ 0.29
RNF4-210ENST00000508235 CAND2O75155 1236 aa16.86■□□□□ 0.29
RNF4-210ENST00000508235 PARNO95453 639 aaKnown RBP16.86■□□□□ 0.29
RNF4-210ENST00000508235 INSRRP14616 1297 aa16.86■□□□□ 0.29
RNF4-210ENST00000508235 BMP8BP34820 402 aa16.86■□□□□ 0.29
RNF4-210ENST00000508235 TOB1P50616 345 aaPredicted RBP16.86■□□□□ 0.29
RNF4-210ENST00000508235 PSMC5P62195 406 aa16.86■□□□□ 0.29
RNF4-210ENST00000508235 ADAM17P78536 824 aa16.86■□□□□ 0.29
RNF4-210ENST00000508235 FPGSQ05932 587 aa16.86■□□□□ 0.29
RNF4-210ENST00000508235 RBL2Q08999 1139 aa16.86■□□□□ 0.29
RNF4-210ENST00000508235 PPIGQ13427 754 aaKnown RBP eCLIP16.86■□□□□ 0.293e-7■□□□□ 8.7
RNF4-210ENST00000508235 EPHA7Q15375 998 aa16.86■□□□□ 0.29
RNF4-210ENST00000508235 ZNF484Q5JVG2 852 aa16.86■□□□□ 0.29
RNF4-210ENST00000508235 NCAPH2Q6IBW4 605 aa16.86■□□□□ 0.29
RNF4-210ENST00000508235 NEK9Q8TD19 979 aa16.86■□□□□ 0.29
RNF4-210ENST00000508235 CTAGE1Q96RT6 745 aa16.86■□□□□ 0.29
RNF4-210ENST00000508235 TMEM60Q9H2L4 133 aa16.86■□□□□ 0.29
RNF4-210ENST00000508235 TUBE1Q9UJT0 475 aa16.86■□□□□ 0.29
RNF4-210ENST00000508235 TANC1Q9C0D5 1861 aa16.86■□□□□ 0.29
RNF4-210ENST00000508235 MBLAC1A4D2B0 266 aaPredicted RBP16.85■□□□□ 0.29
RNF4-210ENST00000508235 TREHO43280 583 aa16.85■□□□□ 0.29
RNF4-210ENST00000508235 BMP15O95972 392 aa16.85■□□□□ 0.29
RNF4-210ENST00000508235 OATP04181 439 aa16.85■□□□□ 0.29
RNF4-210ENST00000508235 P4HBP07237 508 aaKnown RBP16.85■□□□□ 0.29
RNF4-210ENST00000508235 ITGB8P26012 769 aa16.85■□□□□ 0.29
RNF4-210ENST00000508235 CYP2C18P33260 490 aa16.85■□□□□ 0.29
RNF4-210ENST00000508235 QARSP47897 775 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms