RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 CCL23P55773 120 aa20.62■□□□□ 0.89
PDLIM7-216ENST00000506537 FPGSQ05932 587 aa20.62■□□□□ 0.89
PDLIM7-216ENST00000506537 PLCB4Q15147 1175 aa20.62■□□□□ 0.89
PDLIM7-216ENST00000506537 TRIM71Q2Q1W2 868 aaKnown RBP20.62■□□□□ 0.89
PDLIM7-216ENST00000506537 PLPPR4Q7Z2D5 763 aa20.62■□□□□ 0.89
PDLIM7-216ENST00000506537 SMAP1Q8IYB5 467 aaPredicted RBP20.62■□□□□ 0.89
PDLIM7-216ENST00000506537 AFAP1L1Q8TED9 768 aa20.62■□□□□ 0.89
PDLIM7-216ENST00000506537 LMBR1Q8WVP7 490 aa20.62■□□□□ 0.89
PDLIM7-216ENST00000506537 NAP1L4Q99733 375 aaKnown RBP20.62■□□□□ 0.89
PDLIM7-216ENST00000506537 KIF3AQ9Y496 699 aa20.62■□□□□ 0.89
PDLIM7-216ENST00000506537 WDR64B1ANS9 1081 aa20.61■□□□□ 0.89
PDLIM7-216ENST00000506537 K7ELQ4 463 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-216ENST00000506537 BACH1O14867 736 aa20.61■□□□□ 0.89
PDLIM7-216ENST00000506537 TREHO43280 583 aa20.61■□□□□ 0.89
PDLIM7-216ENST00000506537 CSF2RAP15509 400 aa20.61■□□□□ 0.89
PDLIM7-216ENST00000506537 PTK7Q13308 1070 aa20.61■□□□□ 0.89
PDLIM7-216ENST00000506537 SWSAP1Q6NVH7 229 aa20.61■□□□□ 0.89
PDLIM7-216ENST00000506537 MIS18BP1Q6P0N0 1132 aa20.61■□□□□ 0.89
PDLIM7-216ENST00000506537 SERINC5Q86VE9 423 aa20.61■□□□□ 0.89
PDLIM7-216ENST00000506537 NOSTRINQ8IVI9 506 aa20.61■□□□□ 0.89
PDLIM7-216ENST00000506537 ATP6V0A1Q93050 837 aa20.61■□□□□ 0.89
PDLIM7-216ENST00000506537 VWCEQ96DN2 955 aa20.61■□□□□ 0.89
PDLIM7-216ENST00000506537 TCEAL9Q9UHQ7 104 aa20.61■□□□□ 0.89
PDLIM7-216ENST00000506537 VAV3Q9UKW4 847 aa20.61■□□□□ 0.89
PDLIM7-216ENST00000506537 PCDHA10Q9Y5I2 948 aa20.61■□□□□ 0.89
PDLIM7-216ENST00000506537 SCN5AQ14524 2016 aa20.61■□□□□ 0.89
PDLIM7-216ENST00000506537 IGSF9BQ9UPX0 1349 aa20.6■□□□□ 0.89
PDLIM7-216ENST00000506537 RBAK-RBAKDNI3L0D1 243 aa20.6■□□□□ 0.89
PDLIM7-216ENST00000506537 PITPNM1O00562 1244 aa20.6■□□□□ 0.89
PDLIM7-216ENST00000506537 ATP4AP20648 1035 aa20.6■□□□□ 0.89
PDLIM7-216ENST00000506537 U2AF2P26368 475 aaKnown RBP eCLIP20.6■□□□□ 0.89
PDLIM7-216ENST00000506537 RBL2Q08999 1139 aa20.6■□□□□ 0.89
PDLIM7-216ENST00000506537 PPFIA1Q13136 1202 aa20.6■□□□□ 0.89
PDLIM7-216ENST00000506537 GRIK4Q16099 956 aa20.6■□□□□ 0.89
PDLIM7-216ENST00000506537 C9orf50Q5SZB4 431 aa20.6■□□□□ 0.89
PDLIM7-216ENST00000506537 SNX21Q969T3 373 aa20.6■□□□□ 0.89
PDLIM7-216ENST00000506537 SCLYQ96I15 445 aa20.6■□□□□ 0.89
PDLIM7-216ENST00000506537 ZNF302Q9NR11 478 aa20.6■□□□□ 0.89
PDLIM7-216ENST00000506537 DISC1Q9NRI5 854 aa20.6■□□□□ 0.89
PDLIM7-216ENST00000506537 NRCAMQ92823 1304 aa20.59■□□□□ 0.89
PDLIM7-216ENST00000506537 TBX3O15119 743 aa20.59■□□□□ 0.89
PDLIM7-216ENST00000506537 PSAPP07602 524 aa20.59■□□□□ 0.89
PDLIM7-216ENST00000506537 UGCGQ16739 394 aa20.59■□□□□ 0.89
PDLIM7-216ENST00000506537 FAM160B1Q5W0V3 765 aa20.59■□□□□ 0.89
PDLIM7-216ENST00000506537 PDXDC2PQ6P474 469 aa20.59■□□□□ 0.89
PDLIM7-216ENST00000506537 TRAF7Q6Q0C0 670 aa20.59■□□□□ 0.89
PDLIM7-216ENST00000506537 C16orf59Q7L2K0 433 aa20.59■□□□□ 0.89
PDLIM7-216ENST00000506537 TDHQ8IZJ6 230 aa20.59■□□□□ 0.89
PDLIM7-216ENST00000506537 TMEM199Q8N511 208 aa20.59■□□□□ 0.89
PDLIM7-216ENST00000506537 CAGE1Q8TC20 777 aa20.59■□□□□ 0.89
PDLIM7-216ENST00000506537 FAM20AQ96MK3 541 aa20.59■□□□□ 0.89
PDLIM7-216ENST00000506537 GABBR1Q9UBS5 961 aa20.59■□□□□ 0.89
PDLIM7-216ENST00000506537 SAMM50Q9Y512 469 aa20.59■□□□□ 0.89
PDLIM7-216ENST00000506537 MAFBQ9Y5Q3 323 aaPredicted RBP20.59■□□□□ 0.89
PDLIM7-216ENST00000506537 KAT6AQ92794 2004 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 MYH9P35579 1960 aaKnown RBP20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 A0A1W2PPC1 479 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 POTEB3A0JP26 581 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 EML1O00423 815 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 INSRRP14616 1297 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 ATP2B1P20020 1258 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 SFNP31947 248 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 SLC26A2P50443 739 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 JAK3P52333 1124 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 PPP2R5CQ13362 524 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 PPIGQ13427 754 aaKnown RBP eCLIP20.58■□□□□ 0.895e-10■■■□□ 17
PDLIM7-216ENST00000506537 BFSP2Q13515 415 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 GNL2Q13823 731 aaKnown RBP20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 MARCH8Q5T0T0 291 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 POTEBQ6S5H4 581 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 MIER3Q7Z3K6 550 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 ATP8B4Q8TF62 1192 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 TRAPPC12Q8WVT3 735 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 ZBTB10Q96DT7 871 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 TMEM60Q9H2L4 133 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 TRPC6Q9Y210 931 aa20.58■□□□□ 0.89
PDLIM7-216ENST00000506537 MBLAC1A4D2B0 266 aaPredicted RBP20.57■□□□□ 0.88
PDLIM7-216ENST00000506537 ZNF862O60290 1169 aa20.57■□□□□ 0.88
PDLIM7-216ENST00000506537 NEMFO60524 1076 aa20.57■□□□□ 0.88
PDLIM7-216ENST00000506537 IQCF3P0C7M6 154 aa20.57■□□□□ 0.88
PDLIM7-216ENST00000506537 ACRP10323 421 aa20.57■□□□□ 0.88
PDLIM7-216ENST00000506537 GNAT1P11488 350 aa20.57■□□□□ 0.88
PDLIM7-216ENST00000506537 CKBP12277 381 aa20.57■□□□□ 0.88
PDLIM7-216ENST00000506537 MCM7P33993 719 aa20.57■□□□□ 0.88
PDLIM7-216ENST00000506537 IGBP1P78318 339 aa20.57■□□□□ 0.88
PDLIM7-216ENST00000506537 SPIRE1Q08AE8 756 aa20.57■□□□□ 0.88
PDLIM7-216ENST00000506537 NBR1Q14596 966 aa20.57■□□□□ 0.88
PDLIM7-216ENST00000506537 SHHQ15465 462 aa20.57■□□□□ 0.88
PDLIM7-216ENST00000506537 CALCRLQ16602 461 aa20.57■□□□□ 0.88
PDLIM7-216ENST00000506537 RUFY4Q6ZNE9 571 aa20.57■□□□□ 0.88
PDLIM7-216ENST00000506537 CCDC155Q8N6L0 562 aa20.57■□□□□ 0.88
PDLIM7-216ENST00000506537 RDM1Q8NG50 284 aa20.57■□□□□ 0.88
PDLIM7-216ENST00000506537 IL23AQ9NPF7 189 aa20.57■□□□□ 0.88
PDLIM7-216ENST00000506537 ZBTB42B2RXF5 422 aa20.56■□□□□ 0.88
PDLIM7-216ENST00000506537 SELPP16109 830 aa20.56■□□□□ 0.88
PDLIM7-216ENST00000506537 TOB1P50616 345 aaPredicted RBP20.56■□□□□ 0.88
PDLIM7-216ENST00000506537 GPNMBQ14956 572 aa20.56■□□□□ 0.88
PDLIM7-216ENST00000506537 LARP1BQ659C4 914 aaKnown RBP20.56■□□□□ 0.88
PDLIM7-216ENST00000506537 INTS4Q96HW7 963 aaKnown RBP20.56■□□□□ 0.88
PDLIM7-216ENST00000506537 MTMR9Q96QG7 549 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms