RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 IGKV6D-21A0A0A0MT36 114 aa18.85■□□□□ 0.61
SNCA-209ENST00000506244 TBX3O15119 743 aa18.85■□□□□ 0.61
SNCA-209ENST00000506244 EDIL3O43854 480 aa18.85■□□□□ 0.61
SNCA-209ENST00000506244 CAND2O75155 1236 aa18.85■□□□□ 0.61
SNCA-209ENST00000506244 CSF2RAP15509 400 aa18.85■□□□□ 0.61
SNCA-209ENST00000506244 GUCY1B3Q02153 619 aa18.85■□□□□ 0.61
SNCA-209ENST00000506244 SERINC5Q86VE9 423 aa18.85■□□□□ 0.61
SNCA-209ENST00000506244 ETNPPLQ8TBG4 499 aa18.85■□□□□ 0.61
SNCA-209ENST00000506244 LMBR1Q8WVP7 490 aa18.85■□□□□ 0.61
SNCA-209ENST00000506244 FAM20AQ96MK3 541 aa18.85■□□□□ 0.61
SNCA-209ENST00000506244 WNT8AQ9H1J5 351 aa18.85■□□□□ 0.61
SNCA-209ENST00000506244 RNPEPQ9H4A4 650 aa18.85■□□□□ 0.61
SNCA-209ENST00000506244 IL23AQ9NPF7 189 aa18.85■□□□□ 0.61
SNCA-209ENST00000506244 PCDH10Q9P2E7 1040 aa18.85■□□□□ 0.61
SNCA-209ENST00000506244 SMC3Q9UQE7 1217 aa18.85■□□□□ 0.61
SNCA-209ENST00000506244 RRN3P2A6NIE6 340 aa18.84■□□□□ 0.61
SNCA-209ENST00000506244 SLC37A4O43826 429 aa18.84■□□□□ 0.61
SNCA-209ENST00000506244 MARCH6O60337 910 aa18.84■□□□□ 0.61
SNCA-209ENST00000506244 PSMD10O75832 226 aa18.84■□□□□ 0.61
SNCA-209ENST00000506244 RPLP2P05387 115 aaKnown RBP18.84■□□□□ 0.61
SNCA-209ENST00000506244 SELPP16109 830 aa18.84■□□□□ 0.61
SNCA-209ENST00000506244 CCL23P55773 120 aa18.84■□□□□ 0.61
SNCA-209ENST00000506244 GRIK4Q16099 956 aa18.84■□□□□ 0.61
SNCA-209ENST00000506244 PDXDC2PQ6P474 469 aa18.84■□□□□ 0.61
SNCA-209ENST00000506244 CCDC60Q8IWA6 550 aaPredicted RBP18.84■□□□□ 0.61
SNCA-209ENST00000506244 SLFN12Q8IYM2 578 aa18.84■□□□□ 0.61
SNCA-209ENST00000506244 RPUSD2Q8IZ73 545 aaKnown RBP18.84■□□□□ 0.61
SNCA-209ENST00000506244 UIMC1Q96RL1 719 aa18.84■□□□□ 0.61
SNCA-209ENST00000506244 CTAGE1Q96RT6 745 aa18.84■□□□□ 0.61
SNCA-209ENST00000506244 PCYT2Q99447 389 aa18.84■□□□□ 0.61
SNCA-209ENST00000506244 MTIF3Q9H2K0 278 aaKnown RBP18.84■□□□□ 0.61
SNCA-209ENST00000506244 KCNMB3Q9NPA1 279 aa18.84■□□□□ 0.61
SNCA-209ENST00000506244 SETD4Q9NVD3 440 aa18.84■□□□□ 0.61
SNCA-209ENST00000506244 RANBP2P49792 3224 aaKnown RBP18.84■□□□□ 0.61
SNCA-209ENST00000506244 POTEB3A0JP26 581 aa18.83■□□□□ 0.6
SNCA-209ENST00000506244 CHMP2AO43633 222 aa18.83■□□□□ 0.6
SNCA-209ENST00000506244 LRIT3Q3SXY7 679 aa18.83■□□□□ 0.6
SNCA-209ENST00000506244 EARS2Q5JPH6 523 aaKnown RBP18.83■□□□□ 0.6
SNCA-209ENST00000506244 TAF2Q6P1X5 1199 aa18.83■□□□□ 0.6
SNCA-209ENST00000506244 POTEBQ6S5H4 581 aa18.83■□□□□ 0.6
SNCA-209ENST00000506244 LRRC8DQ7L1W4 858 aa18.83■□□□□ 0.6
SNCA-209ENST00000506244 ATP8B4Q8TF62 1192 aa18.83■□□□□ 0.6
SNCA-209ENST00000506244 FAM167AQ96KS9 214 aa18.83■□□□□ 0.6
SNCA-209ENST00000506244 DISC1Q9NRI5 854 aa18.83■□□□□ 0.6
SNCA-209ENST00000506244 TUBE1Q9UJT0 475 aa18.83■□□□□ 0.6
SNCA-209ENST00000506244 KAT6AQ92794 2004 aa18.83■□□□□ 0.6
SNCA-209ENST00000506244 COL1A2P08123 1366 aa18.82■□□□□ 0.6
SNCA-209ENST00000506244 IGSF9BQ9UPX0 1349 aa18.82■□□□□ 0.6
SNCA-209ENST00000506244 FAM205CA6NFA0 338 aa18.82■□□□□ 0.6
SNCA-209ENST00000506244 NEMFO60524 1076 aa18.82■□□□□ 0.6
SNCA-209ENST00000506244 BAG4O95429 457 aaKnown RBP18.82■□□□□ 0.6
SNCA-209ENST00000506244 IQCF3P0C7M6 154 aa18.82■□□□□ 0.6
SNCA-209ENST00000506244 CKBP12277 381 aa18.82■□□□□ 0.6
SNCA-209ENST00000506244 GJB2P29033 226 aa18.82■□□□□ 0.6
SNCA-209ENST00000506244 ZNF200P98182 395 aaPredicted RBP18.82■□□□□ 0.6
SNCA-209ENST00000506244 ORC2Q13416 577 aaPredicted RBP18.82■□□□□ 0.6
SNCA-209ENST00000506244 PLCB4Q15147 1175 aa18.82■□□□□ 0.6
SNCA-209ENST00000506244 SWSAP1Q6NVH7 229 aa18.82■□□□□ 0.6
SNCA-209ENST00000506244 MIER3Q7Z3K6 550 aa18.82■□□□□ 0.6
SNCA-209ENST00000506244 RSPH3Q86UC2 560 aa18.82■□□□□ 0.6
SNCA-209ENST00000506244 POTEDQ86YR6 584 aa18.82■□□□□ 0.6
SNCA-209ENST00000506244 NOSTRINQ8IVI9 506 aa18.82■□□□□ 0.6
SNCA-209ENST00000506244 CKAP2LQ8IYA6 745 aa18.82■□□□□ 0.6
SNCA-209ENST00000506244 DHX38Q92620 1227 aaKnown RBP18.82■□□□□ 0.6
SNCA-209ENST00000506244 SCLYQ96I15 445 aa18.82■□□□□ 0.6
SNCA-209ENST00000506244 RNPC3Q96LT9 517 aaKnown RBP18.82■□□□□ 0.6
SNCA-209ENST00000506244 UNC45AQ9H3U1 944 aa18.82■□□□□ 0.6
SNCA-209ENST00000506244 NOL7Q9UMY1 257 aaKnown RBP18.82■□□□□ 0.6
SNCA-209ENST00000506244 H3BQV1 296 aa18.81■□□□□ 0.6
SNCA-209ENST00000506244 TREHO43280 583 aa18.81■□□□□ 0.6
SNCA-209ENST00000506244 HBP1O60381 514 aa18.81■□□□□ 0.6
SNCA-209ENST00000506244 TRAPPC10P48553 1259 aa18.81■□□□□ 0.6
SNCA-209ENST00000506244 ADAM17P78536 824 aa18.81■□□□□ 0.6
SNCA-209ENST00000506244 BBXQ8WY36 941 aaPredicted RBP18.81■□□□□ 0.6
SNCA-209ENST00000506244 MAFBQ9Y5Q3 323 aaPredicted RBP18.81■□□□□ 0.6
SNCA-209ENST00000506244 MBLAC1A4D2B0 266 aaPredicted RBP18.8■□□□□ 0.6
SNCA-209ENST00000506244 ACTN1P12814 892 aa18.8■□□□□ 0.6
SNCA-209ENST00000506244 INSRRP14616 1297 aa18.8■□□□□ 0.6
SNCA-209ENST00000506244 THPOP40225 353 aa18.8■□□□□ 0.6
SNCA-209ENST00000506244 EPHB4P54760 987 aa18.8■□□□□ 0.6
SNCA-209ENST00000506244 PPP2R5CQ13362 524 aa18.8■□□□□ 0.6
SNCA-209ENST00000506244 CUL4AQ13619 759 aa18.8■□□□□ 0.6
SNCA-209ENST00000506244 HIC1Q14526 733 aa18.8■□□□□ 0.6
SNCA-209ENST00000506244 SHHQ15465 462 aa18.8■□□□□ 0.6
SNCA-209ENST00000506244 CALCRLQ16602 461 aa18.8■□□□□ 0.6
SNCA-209ENST00000506244 TRIM71Q2Q1W2 868 aaKnown RBP18.8■□□□□ 0.6
SNCA-209ENST00000506244 C9orf50Q5SZB4 431 aa18.8■□□□□ 0.6
SNCA-209ENST00000506244 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.8■□□□□ 0.6
SNCA-209ENST00000506244 GABBR1Q9UBS5 961 aa18.8■□□□□ 0.6
SNCA-209ENST00000506244 CEP131Q9UPN4 1083 aa18.8■□□□□ 0.6
SNCA-209ENST00000506244 MYH9P35579 1960 aaKnown RBP18.8■□□□□ 0.6
SNCA-209ENST00000506244 TRIP12Q14669 1992 aaPredicted RBP18.79■□□□□ 0.6
SNCA-209ENST00000506244 K7ELQ4 463 aaPredicted RBP18.79■□□□□ 0.6
SNCA-209ENST00000506244 DKC1O60832 514 aaKnown RBP eCLIP18.79■□□□□ 0.6
SNCA-209ENST00000506244 U2AF2P26368 475 aaKnown RBP eCLIP18.79■□□□□ 0.6
SNCA-209ENST00000506244 IGBP1P78318 339 aa18.79■□□□□ 0.6
SNCA-209ENST00000506244 ZNF484Q5JVG2 852 aa18.79■□□□□ 0.6
SNCA-209ENST00000506244 TMEM240Q5SV17 173 aa18.79■□□□□ 0.6
SNCA-209ENST00000506244 B3GNT9Q6UX72 402 aa18.79■□□□□ 0.6
SNCA-209ENST00000506244 RPAINQ86UA6 219 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms