RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 DDX25Q9UHL0 483 aaKnown RBP20.2■□□□□ 0.82
SMN1-204ENST00000506163 TET1Q8NFU7 2136 aa20.2■□□□□ 0.82
SMN1-204ENST00000506163 PITPNM1O00562 1244 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 STAT5BP51692 787 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 RBL2Q08999 1139 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 PTK7Q13308 1070 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 MARCH8Q5T0T0 291 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 PPP4R3AQ6IN85 833 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 ZNF746Q6NUN9 644 aaPredicted RBP20.19■□□□□ 0.82
SMN1-204ENST00000506163 SWSAP1Q6NVH7 229 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 B3GNT9Q6UX72 402 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 RIT2Q99578 217 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 KAT6AQ92794 2004 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 CKBP12277 381 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 PPIGQ13427 754 aaKnown RBP eCLIP20.19■□□□□ 0.82
SMN1-204ENST00000506163 TRIM29Q14134 588 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 LRIT3Q3SXY7 679 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 ZNF365Q70YC5 407 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 HAS1Q92839 578 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 LRCH3Q96II8 777 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 UNC45AQ9H3U1 944 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 AZI2Q9H6S1 392 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 KCNMB3Q9NPA1 279 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 IL23AQ9NPF7 189 aa20.19■□□□□ 0.82
SMN1-204ENST00000506163 CCNT1O60563 726 aaKnown RBP20.18■□□□□ 0.82
SMN1-204ENST00000506163 INSRRP14616 1297 aa20.18■□□□□ 0.82
SMN1-204ENST00000506163 MCM2P49736 904 aa20.18■□□□□ 0.82
SMN1-204ENST00000506163 KRT76Q01546 638 aa20.18■□□□□ 0.82
SMN1-204ENST00000506163 PPFIA1Q13136 1202 aa20.18■□□□□ 0.82
SMN1-204ENST00000506163 BFSP2Q13515 415 aa20.18■□□□□ 0.82
SMN1-204ENST00000506163 GRIK4Q16099 956 aa20.18■□□□□ 0.82
SMN1-204ENST00000506163 ZNF618Q5T7W0 954 aa20.18■□□□□ 0.82
SMN1-204ENST00000506163 LRCH2Q5VUJ6 765 aa20.18■□□□□ 0.82
SMN1-204ENST00000506163 CAGE1Q8TC20 777 aa20.18■□□□□ 0.82
SMN1-204ENST00000506163 AFAP1L1Q8TED9 768 aa20.18■□□□□ 0.82
SMN1-204ENST00000506163 BRMS1Q9HCU9 246 aa20.18■□□□□ 0.82
SMN1-204ENST00000506163 NRCAMQ92823 1304 aa20.17■□□□□ 0.82
SMN1-204ENST00000506163 KIF28PB7ZC32 967 aa20.17■□□□□ 0.82
SMN1-204ENST00000506163 BACH1O14867 736 aa20.17■□□□□ 0.82
SMN1-204ENST00000506163 GAS7O60861 476 aa20.17■□□□□ 0.82
SMN1-204ENST00000506163 MIS18BP1Q6P0N0 1132 aa20.17■□□□□ 0.82
SMN1-204ENST00000506163 RUFY4Q6ZNE9 571 aa20.17■□□□□ 0.82
SMN1-204ENST00000506163 DEFB128Q7Z7B8 93 aa20.17■□□□□ 0.82
SMN1-204ENST00000506163 FAM184AQ8NB25 1140 aa20.17■□□□□ 0.82
SMN1-204ENST00000506163 RETREG2Q8NC44 543 aa20.17■□□□□ 0.82
SMN1-204ENST00000506163 TRAPPC12Q8WVT3 735 aa20.17■□□□□ 0.82
SMN1-204ENST00000506163 OSBPL7Q9BZF2 842 aa20.17■□□□□ 0.82
SMN1-204ENST00000506163 ZNF302Q9NR11 478 aa20.17■□□□□ 0.82
SMN1-204ENST00000506163 PCDHA10Q9Y5I2 948 aa20.17■□□□□ 0.82
SMN1-204ENST00000506163 MAFBQ9Y5Q3 323 aaPredicted RBP20.17■□□□□ 0.82
SMN1-204ENST00000506163 WDR81Q562E7 1941 aa20.16■□□□□ 0.82
SMN1-204ENST00000506163 MBLAC1A4D2B0 266 aaPredicted RBP20.16■□□□□ 0.82
SMN1-204ENST00000506163 CHMP2AO43633 222 aa20.16■□□□□ 0.82
SMN1-204ENST00000506163 SELPP16109 830 aa20.16■□□□□ 0.82
SMN1-204ENST00000506163 GCFC2P16383 781 aaKnown RBP20.16■□□□□ 0.82
SMN1-204ENST00000506163 MBTPS1Q14703 1052 aa20.16■□□□□ 0.82
SMN1-204ENST00000506163 RASIP1Q5U651 963 aa20.16■□□□□ 0.82
SMN1-204ENST00000506163 SMAP1Q8IYB5 467 aaPredicted RBP20.16■□□□□ 0.82
SMN1-204ENST00000506163 TEKT3Q9BXF9 490 aa20.16■□□□□ 0.82
SMN1-204ENST00000506163 DISC1Q9NRI5 854 aa20.16■□□□□ 0.82
SMN1-204ENST00000506163 CXXC1Q9P0U4 656 aaPredicted RBP20.16■□□□□ 0.82
SMN1-204ENST00000506163 POTEB3A0JP26 581 aa20.15■□□□□ 0.82
SMN1-204ENST00000506163 ZBTB42B2RXF5 422 aa20.15■□□□□ 0.82
SMN1-204ENST00000506163 EML1O00423 815 aa20.15■□□□□ 0.82
SMN1-204ENST00000506163 ZNF862O60290 1169 aa20.15■□□□□ 0.82
SMN1-204ENST00000506163 NBNO60934 754 aa20.15■□□□□ 0.82
SMN1-204ENST00000506163 IGBP1P78318 339 aa20.15■□□□□ 0.82
SMN1-204ENST00000506163 UGCGQ16739 394 aa20.15■□□□□ 0.82
SMN1-204ENST00000506163 TCTN1Q2MV58 587 aa20.15■□□□□ 0.82
SMN1-204ENST00000506163 PDXDC2PQ6P474 469 aa20.15■□□□□ 0.82
SMN1-204ENST00000506163 POTEBQ6S5H4 581 aa20.15■□□□□ 0.82
SMN1-204ENST00000506163 LRRC8DQ7L1W4 858 aa20.15■□□□□ 0.82
SMN1-204ENST00000506163 RNPC3Q96LT9 517 aaKnown RBP20.15■□□□□ 0.82
SMN1-204ENST00000506163 GABBR1Q9UBS5 961 aa20.15■□□□□ 0.82
SMN1-204ENST00000506163 VAV3Q9UKW4 847 aa20.15■□□□□ 0.82
SMN1-204ENST00000506163 MYH9P35579 1960 aaKnown RBP20.14■□□□□ 0.81
SMN1-204ENST00000506163 WDR64B1ANS9 1081 aa20.14■□□□□ 0.81
SMN1-204ENST00000506163 PSAPP07602 524 aa20.14■□□□□ 0.81
SMN1-204ENST00000506163 GNAT1P11488 350 aa20.14■□□□□ 0.81
SMN1-204ENST00000506163 GJB2P29033 226 aa20.14■□□□□ 0.81
SMN1-204ENST00000506163 THPOP40225 353 aa20.14■□□□□ 0.81
SMN1-204ENST00000506163 CUL4AQ13619 759 aa20.14■□□□□ 0.81
SMN1-204ENST00000506163 FAM109BQ6ICB4 259 aaPredicted RBP20.14■□□□□ 0.81
SMN1-204ENST00000506163 OTOP2Q7RTS6 562 aa20.14■□□□□ 0.81
SMN1-204ENST00000506163 ATP8B4Q8TF62 1192 aa20.14■□□□□ 0.81
SMN1-204ENST00000506163 FOXP1Q9H334 677 aaPredicted RBP20.14■□□□□ 0.81
SMN1-204ENST00000506163 TRPC6Q9Y210 931 aa20.14■□□□□ 0.81
SMN1-204ENST00000506163 SAMM50Q9Y512 469 aa20.14■□□□□ 0.81
SMN1-204ENST00000506163 TANC1Q9C0D5 1861 aa20.14■□□□□ 0.81
SMN1-204ENST00000506163 FGBP02675 491 aa20.13■□□□□ 0.81
SMN1-204ENST00000506163 SLC26A2P50443 739 aa20.13■□□□□ 0.81
SMN1-204ENST00000506163 SAFBQ15424 915 aaKnown RBP eCLIP20.13■□□□□ 0.81
SMN1-204ENST00000506163 FAM160B1Q5W0V3 765 aa20.13■□□□□ 0.81
SMN1-204ENST00000506163 TRMT1LQ7Z2T5 733 aaKnown RBP20.13■□□□□ 0.81
SMN1-204ENST00000506163 CCDC155Q8N6L0 562 aa20.13■□□□□ 0.81
SMN1-204ENST00000506163 HERVK_113Q902F9 699 aa20.13■□□□□ 0.81
SMN1-204ENST00000506163 FAM20AQ96MK3 541 aa20.13■□□□□ 0.81
SMN1-204ENST00000506163 IGSF9BQ9UPX0 1349 aa20.13■□□□□ 0.81
SMN1-204ENST00000506163 STBD1O95210 358 aa20.12■□□□□ 0.81
SMN1-204ENST00000506163 ATP2B1P20020 1258 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms