RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 GORASP1Q9BQQ3 440 aa8□□□□□ -1.13
NIPBL-205ENST00000505998 CAAP1Q9H8G2 361 aa8□□□□□ -1.13
NIPBL-205ENST00000505998 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8□□□□□ -1.13
NIPBL-205ENST00000505998 KCNH7Q9NS40 1196 aa8□□□□□ -1.13
NIPBL-205ENST00000505998 F2P00734 622 aa7.99□□□□□ -1.13
NIPBL-205ENST00000505998 C4BPAP04003 597 aaKnown RBP7.99□□□□□ -1.13
NIPBL-205ENST00000505998 ZBTB48P10074 688 aaPredicted RBP7.99□□□□□ -1.13
NIPBL-205ENST00000505998 SOX5P35711 763 aa7.99□□□□□ -1.13
NIPBL-205ENST00000505998 STAT3P40763 770 aa7.99□□□□□ -1.13
NIPBL-205ENST00000505998 TMEM132BQ14DG7 1078 aa7.99□□□□□ -1.13
NIPBL-205ENST00000505998 SART3Q15020 963 aaKnown RBP7.99□□□□□ -1.13
NIPBL-205ENST00000505998 SEPT7Q16181 437 aaKnown RBP7.99□□□□□ -1.13
NIPBL-205ENST00000505998 TMC5Q6UXY8 1006 aa7.99□□□□□ -1.13
NIPBL-205ENST00000505998 ZNF662Q6ZS27 426 aa7.99□□□□□ -1.13
NIPBL-205ENST00000505998 RNF180Q86T96 592 aa7.99□□□□□ -1.13
NIPBL-205ENST00000505998 STK32CQ86UX6 486 aa7.99□□□□□ -1.13
NIPBL-205ENST00000505998 NXPE1Q8N323 547 aa7.99□□□□□ -1.13
NIPBL-205ENST00000505998 OR2W6PQ8NHA6 318 aa7.99□□□□□ -1.13
NIPBL-205ENST00000505998 DLG3Q92796 817 aa7.99□□□□□ -1.13
NIPBL-205ENST00000505998 ZBTB8AQ96BR9 441 aa7.99□□□□□ -1.13
NIPBL-205ENST00000505998 SYT3Q9BQG1 590 aa7.99□□□□□ -1.13
NIPBL-205ENST00000505998 SPC25Q9HBM1 224 aa7.99□□□□□ -1.13
NIPBL-205ENST00000505998 EPB41L4AQ9HCS5 686 aaPredicted RBP7.99□□□□□ -1.13
NIPBL-205ENST00000505998 B3GALT1Q9Y5Z6 326 aa7.99□□□□□ -1.13
NIPBL-205ENST00000505998 PDS5BQ9NTI5 1447 aa7.98□□□□□ -1.13
NIPBL-205ENST00000505998 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-205ENST00000505998 ZNF891A8MT65 544 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-205ENST00000505998 ENO2P09104 434 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-205ENST00000505998 ITGA1P56199 1179 aa7.98□□□□□ -1.13
NIPBL-205ENST00000505998 SEC23AQ15436 765 aa7.98□□□□□ -1.13
NIPBL-205ENST00000505998 ZNF174Q15697 407 aa7.98□□□□□ -1.13
NIPBL-205ENST00000505998 SKOR2Q2VWA4 1001 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-205ENST00000505998 CT47A1Q5JQC4 288 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-205ENST00000505998 CD276Q5ZPR3 534 aa7.98□□□□□ -1.13
NIPBL-205ENST00000505998 FAM177A1Q8N128 213 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-205ENST00000505998 UBR7Q8N806 425 aa7.98□□□□□ -1.13
NIPBL-205ENST00000505998 KYQ8NBH2 561 aa7.98□□□□□ -1.13
NIPBL-205ENST00000505998 FNIP1Q8TF40 1166 aa7.98□□□□□ -1.13
NIPBL-205ENST00000505998 TMEM209Q96SK2 561 aa7.98□□□□□ -1.13
NIPBL-205ENST00000505998 C11orf84Q9BUA3 381 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-205ENST00000505998 PCIF1Q9H4Z3 704 aa7.98□□□□□ -1.13
NIPBL-205ENST00000505998 ARHGAP28Q9P2N2 729 aa7.98□□□□□ -1.13
NIPBL-205ENST00000505998 RBPJLQ9UBG7 517 aa7.98□□□□□ -1.13
NIPBL-205ENST00000505998 WDR62O43379 1518 aa7.98□□□□□ -1.13
NIPBL-205ENST00000505998 NUAK1O60285 661 aa7.97□□□□□ -1.13
NIPBL-205ENST00000505998 DNAJC6O75061 913 aa7.97□□□□□ -1.13
NIPBL-205ENST00000505998 PLA2G1BP04054 148 aaKnown RBP7.97□□□□□ -1.13
NIPBL-205ENST00000505998 CNGA1P29973 690 aa7.97□□□□□ -1.13
NIPBL-205ENST00000505998 KIF11P52732 1056 aa7.97□□□□□ -1.13
NIPBL-205ENST00000505998 HERVK_113P62684 666 aa7.97□□□□□ -1.13
NIPBL-205ENST00000505998 DBPQ10586 325 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-205ENST00000505998 CIAPIN1Q6FI81 312 aa7.97□□□□□ -1.13
NIPBL-205ENST00000505998 DDX46Q7L014 1031 aaKnown RBP7.97□□□□□ -1.13
NIPBL-205ENST00000505998 FILIP1Q7Z7B0 1213 aa7.97□□□□□ -1.13
NIPBL-205ENST00000505998 PROSER1Q86XN7 944 aa7.97□□□□□ -1.13
NIPBL-205ENST00000505998 TTLL6Q8N841 843 aa7.97□□□□□ -1.13
NIPBL-205ENST00000505998 BIVM-ERCC5R4GMW8 1640 aa7.96□□□□□ -1.13
NIPBL-205ENST00000505998 FANCD2Q9BXW9 1451 aa7.96□□□□□ -1.13
NIPBL-205ENST00000505998 FOXP2O15409 715 aa7.96□□□□□ -1.14
NIPBL-205ENST00000505998 ATP2A2P16615 1042 aaKnown RBP7.96□□□□□ -1.14
NIPBL-205ENST00000505998 HTRA3P83110 453 aa7.96□□□□□ -1.14
NIPBL-205ENST00000505998 DSG1Q02413 1049 aa7.96□□□□□ -1.14
NIPBL-205ENST00000505998 SMAD4Q13485 552 aaKnown RBP7.96□□□□□ -1.14
NIPBL-205ENST00000505998 CC2D1AQ6P1N0 951 aaPredicted RBP7.96□□□□□ -1.14
NIPBL-205ENST00000505998 LIPIQ6XZB0 460 aa7.96□□□□□ -1.14
NIPBL-205ENST00000505998 KRT26Q7Z3Y9 468 aa7.96□□□□□ -1.14
NIPBL-205ENST00000505998 TMEM151BQ8IW70 566 aa7.96□□□□□ -1.14
NIPBL-205ENST00000505998 LINC00482Q8N8I6 264 aa7.96□□□□□ -1.14
NIPBL-205ENST00000505998 TOX2Q96NM4 488 aa7.96□□□□□ -1.14
NIPBL-205ENST00000505998 CLIC6Q96NY7 704 aa7.96□□□□□ -1.14
NIPBL-205ENST00000505998 DLL4Q9NR61 685 aa7.96□□□□□ -1.14
NIPBL-205ENST00000505998 THG1LQ9NWX6 298 aaKnown RBP7.96□□□□□ -1.14
NIPBL-205ENST00000505998 WASF3Q9UPY6 502 aa7.96□□□□□ -1.14
NIPBL-205ENST00000505998 CEP164Q9UPV0 1460 aa7.95□□□□□ -1.14
NIPBL-205ENST00000505998 ZNF839A8K0R7 811 aa7.95□□□□□ -1.14
NIPBL-205ENST00000505998 MMEP08473 750 aa7.95□□□□□ -1.14
NIPBL-205ENST00000505998 VIL1P09327 827 aaKnown RBP7.95□□□□□ -1.14
NIPBL-205ENST00000505998 SDHAP31040 664 aa7.95□□□□□ -1.14
NIPBL-205ENST00000505998 AFF3P51826 1226 aaKnown RBP7.95□□□□□ -1.14
NIPBL-205ENST00000505998 IL2P60568 153 aa7.95□□□□□ -1.14
NIPBL-205ENST00000505998 PFKPQ01813 784 aa7.95□□□□□ -1.14
NIPBL-205ENST00000505998 ADAM9Q13443 819 aa7.95□□□□□ -1.14
NIPBL-205ENST00000505998 KIAA1958Q8N8K9 716 aa7.95□□□□□ -1.14
NIPBL-205ENST00000505998 CHTF18Q8WVB6 975 aa7.95□□□□□ -1.14
NIPBL-205ENST00000505998 USP7Q93009 1102 aa7.95□□□□□ -1.14
NIPBL-205ENST00000505998 DACT3Q96B18 629 aaPredicted RBP7.95□□□□□ -1.14
NIPBL-205ENST00000505998 ZSWIM3Q96MP5 696 aa7.95□□□□□ -1.14
NIPBL-205ENST00000505998 GPR101Q96P66 508 aaPredicted RBP7.95□□□□□ -1.14
NIPBL-205ENST00000505998 WRNIP1Q96S55 665 aa7.95□□□□□ -1.14
NIPBL-205ENST00000505998 IRF2BPLQ9H1B7 796 aa7.95□□□□□ -1.14
NIPBL-205ENST00000505998 SLC39A2Q9NP94 309 aa7.95□□□□□ -1.14
NIPBL-205ENST00000505998 ACSS2Q9NR19 701 aa7.95□□□□□ -1.14
NIPBL-205ENST00000505998 OXSMQ9NWU1 459 aa7.95□□□□□ -1.14
NIPBL-205ENST00000505998 DVL2O14641 736 aa7.94□□□□□ -1.14
NIPBL-205ENST00000505998 YBX3P16989 372 aaKnown RBP eCLIP7.94□□□□□ -1.142e-16■□□□□ 9.5
NIPBL-205ENST00000505998 AOAHP28039 575 aa7.94□□□□□ -1.14
NIPBL-205ENST00000505998 KPNA1P52294 538 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-205ENST00000505998 OCRLQ01968 901 aa7.94□□□□□ -1.14
NIPBL-205ENST00000505998 DHCR24Q15392 516 aa7.94□□□□□ -1.14
NIPBL-205ENST00000505998 SKIDA1Q1XH10 827 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms