RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 LPIN1Q14693 890 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 COL19A1Q14993 1142 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 GNPTABQ3T906 1256 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 FAM26DQ5JW98 314 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 MARCH8Q5T0T0 291 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 PCNX4Q63HM2 1172 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 RAB11FIP4Q86YS3 637 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 ZNF654Q8IZM8 581 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 GJD3Q8N144 294 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 SRBD1Q8N5C6 995 aaKnown RBP6.75□□□□□ -1.33
GYPB-205ENST00000505583 KRI1Q8N9T8 703 aaKnown RBP6.75□□□□□ -1.33
GYPB-205ENST00000505583 BANK1Q8NDB2 785 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 NCOA7Q8NI08 942 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 LINC01599Q8WXQ3 324 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 YME1L1Q96TA2 773 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 IFIH1Q9BYX4 1025 aaKnown RBP6.75□□□□□ -1.33
GYPB-205ENST00000505583 EHMT1Q9H9B1 1298 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 RC3H2Q9HBD1 1191 aaKnown RBP6.75□□□□□ -1.33
GYPB-205ENST00000505583 LY9Q9HBG7 655 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 PKD2L1Q9P0L9 805 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 METRNQ9UJH8 293 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 BOLA1Q9Y3E2 137 aa6.75□□□□□ -1.33
GYPB-205ENST00000505583 MYO7AQ13402 2215 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 TTC3P53804 2025 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 POTEB3A0JP26 581 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 ERICH2A1L162 156 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 PIK3CDO00329 1044 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 ENPP3O14638 875 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 LINC01565O15544 149 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 CAND2O75155 1236 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 STAM2O75886 525 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 CSPG5O95196 566 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 GHRP10912 638 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 GTF2F1P35269 517 aaKnown RBP eCLIP6.74□□□□□ -1.33
GYPB-205ENST00000505583 TCF7P36402 384 aaPredicted RBP6.74□□□□□ -1.33
GYPB-205ENST00000505583 CAMK1Q14012 370 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 UBE2SQ16763 222 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 POTEBQ6S5H4 581 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 CATIPQ7Z7H3 387 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 RALYLQ86SE5 291 aaKnown RBP6.74□□□□□ -1.33
GYPB-205ENST00000505583 RTN4RL1Q86UN2 441 aaPredicted RBP6.74□□□□□ -1.33
GYPB-205ENST00000505583 CRIPAKQ8N1N5 446 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 SMARCC2Q8TAQ2 1214 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 CYP2W1Q8TAV3 490 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 DNAJB3Q8WWF6 145 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 MAP4K1Q92918 833 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 PCYT2Q99447 389 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 SENP7Q9BQF6 1050 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 SPZ1Q9BXG8 430 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 AGO3Q9H9G7 860 aaKnown RBP6.74□□□□□ -1.33
GYPB-205ENST00000505583 ARIH1Q9Y4X5 557 aaPredicted RBP6.74□□□□□ -1.33
GYPB-205ENST00000505583 RBM8AQ9Y5S9 174 aaKnown RBP6.74□□□□□ -1.33
GYPB-205ENST00000505583 NRCAMQ92823 1304 aa6.74□□□□□ -1.33
GYPB-205ENST00000505583 MBLAC1A4D2B0 266 aaPredicted RBP6.73□□□□□ -1.33
GYPB-205ENST00000505583 SH2B2O14492 632 aaPredicted RBP6.73□□□□□ -1.33
GYPB-205ENST00000505583 PRC1O43663 620 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 TBX10O75333 385 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 DDAH1O94760 285 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 GNAT1P11488 350 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 DNAJB1P25685 340 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 SSTR3P32745 418 aaPredicted RBP6.73□□□□□ -1.33
GYPB-205ENST00000505583 CTNNB1P35222 781 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 BMPR1AP36894 532 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 GATMP50440 423 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 IGBP1P78318 339 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 IRX6P78412 446 aaPredicted RBP6.73□□□□□ -1.33
GYPB-205ENST00000505583 ZP2Q05996 745 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 TMEM62Q0P6H9 643 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 HYAL1Q12794 435 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 TRAF1Q13077 416 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 PPFIA1Q13136 1202 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 DSG2Q14126 1118 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 CLUL1Q15846 466 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 GRIK4Q16099 956 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 PTPROQ16827 1216 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 CTC1Q2NKJ3 1217 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 TIGD5Q53EQ6 642 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 FBXO47Q5MNV8 452 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 TYW1BQ6NUM6 668 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 EP400NLQ6ZTU2 488 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 RPAINQ86UA6 219 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 CCDC82Q8N4S0 544 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 FIBCD1Q8N539 461 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 TRAPPC12Q8WVT3 735 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 ZNF689Q96CS4 500 aaPredicted RBP6.73□□□□□ -1.33
GYPB-205ENST00000505583 PABPC5Q96DU9 382 aaKnown RBP6.73□□□□□ -1.33
GYPB-205ENST00000505583 RRP36Q96EU6 259 aaKnown RBP6.73□□□□□ -1.33
GYPB-205ENST00000505583 IL17RAQ96F46 866 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 SAMD11Q96NU1 681 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 TMEM121BQ9BXQ6 578 aaPredicted RBP6.73□□□□□ -1.33
GYPB-205ENST00000505583 LRRC2Q9BYS8 371 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 NSUN3Q9H649 340 aaKnown RBP6.73□□□□□ -1.33
GYPB-205ENST00000505583 ALG13Q9NP73 1137 aaKnown RBP6.73□□□□□ -1.33
GYPB-205ENST00000505583 CLDND1Q9NY35 253 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 TUBE1Q9UJT0 475 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 ZNF215Q9UL58 517 aaPredicted RBP6.73□□□□□ -1.33
GYPB-205ENST00000505583 HCN4Q9Y3Q4 1203 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 UBIAD1Q9Y5Z9 338 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 CDY2AQ9Y6F7 541 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 C5orf42Q9H799 3197 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms