RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 KLHL36Q8N4N3 616 aa7.28□□□□□ -1.24
DEPDC1B-203ENST00000505017 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.28□□□□□ -1.24
DEPDC1B-203ENST00000505017 BORCS6Q96GS4 357 aa7.28□□□□□ -1.24
DEPDC1B-203ENST00000505017 ZFYVE21Q9BQ24 234 aa7.28□□□□□ -1.24
DEPDC1B-203ENST00000505017 FYCO1Q9BQS8 1478 aa7.28□□□□□ -1.24
DEPDC1B-203ENST00000505017 C6orf222P0C671 652 aaPredicted RBP7.27□□□□□ -1.25
DEPDC1B-203ENST00000505017 GNAT1P11488 350 aa7.27□□□□□ -1.25
DEPDC1B-203ENST00000505017 PFKPQ01813 784 aa7.27□□□□□ -1.25
DEPDC1B-203ENST00000505017 SKIDA1Q1XH10 827 aa7.27□□□□□ -1.25
DEPDC1B-203ENST00000505017 GLB1LQ6UWU2 654 aa7.27□□□□□ -1.25
DEPDC1B-203ENST00000505017 IFNL3Q8IZI9 196 aa7.27□□□□□ -1.25
DEPDC1B-203ENST00000505017 SPATA9Q9BWV2 254 aa7.27□□□□□ -1.25
DEPDC1B-203ENST00000505017 CD244Q9BZW8 370 aa7.27□□□□□ -1.25
DEPDC1B-203ENST00000505017 DLL4Q9NR61 685 aa7.27□□□□□ -1.25
DEPDC1B-203ENST00000505017 KCND1Q9NSA2 647 aa7.27□□□□□ -1.25
DEPDC1B-203ENST00000505017 ZFP69BQ9UJL9 534 aa7.27□□□□□ -1.25
DEPDC1B-203ENST00000505017 ADAM29Q9UKF5 820 aa7.27□□□□□ -1.25
DEPDC1B-203ENST00000505017 DSEQ9UL01 958 aa7.27□□□□□ -1.25
DEPDC1B-203ENST00000505017 CASKIN1Q8WXD9 1431 aa7.27□□□□□ -1.25
DEPDC1B-203ENST00000505017 CEP170Q5SW79 1584 aa7.26□□□□□ -1.25
DEPDC1B-203ENST00000505017 B4GALT4O60513 344 aa7.26□□□□□ -1.25
DEPDC1B-203ENST00000505017 GLRBP48167 497 aa7.26□□□□□ -1.25
DEPDC1B-203ENST00000505017 PPP2CBP62714 309 aa7.26□□□□□ -1.25
DEPDC1B-203ENST00000505017 PPP2CAP67775 309 aa7.26□□□□□ -1.25
DEPDC1B-203ENST00000505017 IFRD2Q12894 506 aaPredicted RBP7.26□□□□□ -1.25
DEPDC1B-203ENST00000505017 VASNQ6EMK4 673 aa7.26□□□□□ -1.25
DEPDC1B-203ENST00000505017 KCTD1Q719H9 257 aa7.26□□□□□ -1.25
DEPDC1B-203ENST00000505017 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.26□□□□□ -1.25
DEPDC1B-203ENST00000505017 STPG3Q8N7X2 389 aa7.26□□□□□ -1.25
DEPDC1B-203ENST00000505017 ZNF669Q96BR6 464 aaPredicted RBP7.26□□□□□ -1.25
DEPDC1B-203ENST00000505017 FTSJ1Q9UET6 329 aa7.26□□□□□ -1.25
DEPDC1B-203ENST00000505017 ZNF839A8K0R7 811 aa7.25□□□□□ -1.25
DEPDC1B-203ENST00000505017 DIAPH1O60610 1272 aaKnown RBP7.25□□□□□ -1.25
DEPDC1B-203ENST00000505017 CNOT4O95628 575 aaKnown RBP7.25□□□□□ -1.25
DEPDC1B-203ENST00000505017 RANGAP1P46060 587 aaPredicted RBP7.25□□□□□ -1.25
DEPDC1B-203ENST00000505017 SPIRE1Q08AE8 756 aa7.25□□□□□ -1.25
DEPDC1B-203ENST00000505017 FAM209AQ5JX71 171 aa7.25□□□□□ -1.25
DEPDC1B-203ENST00000505017 Q6ZUG5 572 aa7.25□□□□□ -1.25
DEPDC1B-203ENST00000505017 LRRC47Q8N1G4 583 aaKnown RBP7.25□□□□□ -1.25
DEPDC1B-203ENST00000505017 WRNIP1Q96S55 665 aa7.25□□□□□ -1.25
DEPDC1B-203ENST00000505017 ZDHHC9Q9Y397 364 aa7.25□□□□□ -1.25
DEPDC1B-203ENST00000505017 FHOD3Q2V2M9 1422 aa7.25□□□□□ -1.25
DEPDC1B-203ENST00000505017 CFAP43Q8NDM7 1665 aa7.25□□□□□ -1.25
DEPDC1B-203ENST00000505017 KIAA0556O60303 1618 aa7.24□□□□□ -1.25
DEPDC1B-203ENST00000505017 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.24□□□□□ -1.25
DEPDC1B-203ENST00000505017 FAM90A27PA6NNH2 459 aa7.24□□□□□ -1.25
DEPDC1B-203ENST00000505017 CYP7B1O75881 506 aa7.24□□□□□ -1.25
DEPDC1B-203ENST00000505017 AMY2AP04746 511 aa7.24□□□□□ -1.25
DEPDC1B-203ENST00000505017 AMY2BP19961 511 aa7.24□□□□□ -1.25
DEPDC1B-203ENST00000505017 R3HDM1Q15032 1099 aaKnown RBP7.24□□□□□ -1.25
DEPDC1B-203ENST00000505017 SURF1Q15526 300 aa7.24□□□□□ -1.25
DEPDC1B-203ENST00000505017 SMAD2Q15796 467 aaKnown RBP7.24□□□□□ -1.25
DEPDC1B-203ENST00000505017 SPRED1Q7Z699 444 aa7.24□□□□□ -1.25
DEPDC1B-203ENST00000505017 DVL3Q92997 716 aaPredicted RBP7.24□□□□□ -1.25
DEPDC1B-203ENST00000505017 PFDN2Q9UHV9 154 aa7.24□□□□□ -1.25
DEPDC1B-203ENST00000505017 PTPN22Q9Y2R2 807 aa7.24□□□□□ -1.25
DEPDC1B-203ENST00000505017 PCF11O94913 1555 aaKnown RBP7.24□□□□□ -1.25
DEPDC1B-203ENST00000505017 TIAM1Q13009 1591 aa7.24□□□□□ -1.25
DEPDC1B-203ENST00000505017 CHD1O14646 1710 aa7.24□□□□□ -1.25
DEPDC1B-203ENST00000505017 NPEPPSL1A6NEC2 478 aa7.23□□□□□ -1.25
DEPDC1B-203ENST00000505017 PATE3B3GLJ2 98 aa7.23□□□□□ -1.25
DEPDC1B-203ENST00000505017 FAM47E-STBD1D6RA91 191 aa7.23□□□□□ -1.25
DEPDC1B-203ENST00000505017 WNT9AO14904 365 aa7.23□□□□□ -1.25
DEPDC1B-203ENST00000505017 PDPK1O15530 556 aa7.23□□□□□ -1.25
DEPDC1B-203ENST00000505017 CSF2RBP32927 897 aa7.23□□□□□ -1.25
DEPDC1B-203ENST00000505017 PCDH19Q8TAB3 1148 aa7.23□□□□□ -1.25
DEPDC1B-203ENST00000505017 EXOC2Q96KP1 924 aa7.23□□□□□ -1.25
DEPDC1B-203ENST00000505017 PCGF6Q9BYE7 350 aa7.23□□□□□ -1.25
DEPDC1B-203ENST00000505017 DISP1Q96F81 1524 aa7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 ZXDAP98168 799 aa7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 RASGRF1Q13972 1273 aa7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 NAALADL2Q58DX5 795 aa7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 GPR155Q7Z3F1 870 aa7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 PLEKHH3Q7Z736 793 aa7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 Q8N1X5 172 aa7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 AJUBAQ96IF1 538 aa7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 TACO1Q9BSH4 297 aaKnown RBP7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 KRTAP17-1Q9BYP8 105 aa7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 TRIM55Q9BYV6 548 aa7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 KATNBL1Q9H079 304 aa7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 SLC39A2Q9NP94 309 aa7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 ARHGAP20Q9P2F6 1191 aa7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 CBLCQ9ULV8 474 aa7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 PCDHA8Q9Y5H6 950 aa7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 HECW1Q76N89 1606 aa7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 CCDC18Q5T9S5 1454 aa7.22□□□□□ -1.25
DEPDC1B-203ENST00000505017 MAN2B1O00754 1011 aa7.21□□□□□ -1.26
DEPDC1B-203ENST00000505017 AKAP8O43823 692 aaKnown RBP7.21□□□□□ -1.26
DEPDC1B-203ENST00000505017 CHGBP05060 677 aa7.21□□□□□ -1.26
DEPDC1B-203ENST00000505017 ENO2P09104 434 aaPredicted RBP7.21□□□□□ -1.26
DEPDC1B-203ENST00000505017 FAM153BP0C7A2 387 aa7.21□□□□□ -1.26
DEPDC1B-203ENST00000505017 DBPQ10586 325 aaPredicted RBP7.21□□□□□ -1.26
DEPDC1B-203ENST00000505017 ARHGEF18Q6ZSZ5 1173 aa7.21□□□□□ -1.26
DEPDC1B-203ENST00000505017 ZBTB38Q8NAP3 1195 aaPredicted RBP7.21□□□□□ -1.26
DEPDC1B-203ENST00000505017 CHST13Q8NET6 341 aa7.21□□□□□ -1.26
DEPDC1B-203ENST00000505017 KLC2Q9H0B6 622 aa7.21□□□□□ -1.26
DEPDC1B-203ENST00000505017 BARX1Q9HBU1 254 aaPredicted RBP7.21□□□□□ -1.26
DEPDC1B-203ENST00000505017 SRPK3Q9UPE1 567 aa7.21□□□□□ -1.26
DEPDC1B-203ENST00000505017 TSC22D4Q9Y3Q8 395 aa7.21□□□□□ -1.26
DEPDC1B-203ENST00000505017 SHROOM2Q13796 1616 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms