RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 CTNNA3Q9UI47 895 aa10.54□□□□□ -0.72
DHFR-202ENST00000504396 PRR33A8MZF0 331 aa10.53□□□□□ -0.72
DHFR-202ENST00000504396 RSPH10B2B2RC85 870 aa10.53□□□□□ -0.72
DHFR-202ENST00000504396 LCE2BO14633 110 aa10.53□□□□□ -0.72
DHFR-202ENST00000504396 ZNF213O14771 459 aa10.53□□□□□ -0.72
DHFR-202ENST00000504396 EIF3JO75822 258 aaKnown RBP10.53□□□□□ -0.72
DHFR-202ENST00000504396 NR3C2P08235 984 aa10.53□□□□□ -0.72
DHFR-202ENST00000504396 CTSHP09668 335 aa10.53□□□□□ -0.72
DHFR-202ENST00000504396 PARP1P09874 1014 aaKnown RBP10.53□□□□□ -0.72
DHFR-202ENST00000504396 RSPH10BP0C881 870 aa10.53□□□□□ -0.72
DHFR-202ENST00000504396 ALADP13716 330 aa10.53□□□□□ -0.72
DHFR-202ENST00000504396 PDE1AP54750 535 aa10.53□□□□□ -0.72
DHFR-202ENST00000504396 TIGD5Q53EQ6 642 aa10.53□□□□□ -0.72
DHFR-202ENST00000504396 ASPRV1Q53RT3 343 aa10.53□□□□□ -0.72
DHFR-202ENST00000504396 DBF4BQ8NFT6 615 aa10.53□□□□□ -0.72
DHFR-202ENST00000504396 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.53□□□□□ -0.72
DHFR-202ENST00000504396 PXMP2Q9NR77 195 aa10.53□□□□□ -0.72
DHFR-202ENST00000504396 MICAL3Q7RTP6 2002 aa10.52□□□□□ -0.72
DHFR-202ENST00000504396 C17orf102A2RUQ5 167 aa10.52□□□□□ -0.73
DHFR-202ENST00000504396 B4E1Z4 1266 aa10.52□□□□□ -0.73
DHFR-202ENST00000504396 CSPG5O95196 566 aa10.52□□□□□ -0.73
DHFR-202ENST00000504396 GGPS1O95749 300 aa10.52□□□□□ -0.73
DHFR-202ENST00000504396 MBTPS1Q14703 1052 aa10.52□□□□□ -0.73
DHFR-202ENST00000504396 EPC2Q52LR7 807 aa10.52□□□□□ -0.73
DHFR-202ENST00000504396 SEPT8Q92599 483 aa10.52□□□□□ -0.73
DHFR-202ENST00000504396 ATP6V0A1Q93050 837 aa10.52□□□□□ -0.73
DHFR-202ENST00000504396 MRPL38Q96DV4 380 aaKnown RBP10.52□□□□□ -0.73
DHFR-202ENST00000504396 MLXIPQ9HAP2 919 aa10.52□□□□□ -0.73
DHFR-202ENST00000504396 MAP3K20Q9NYL2 800 aaKnown RBP10.52□□□□□ -0.73
DHFR-202ENST00000504396 FAM50BQ9Y247 325 aa10.52□□□□□ -0.73
DHFR-202ENST00000504396 NLRC5Q86WI3 1866 aa10.52□□□□□ -0.73
DHFR-202ENST00000504396 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.51□□□□□ -0.73
DHFR-202ENST00000504396 CFAP99D6REC4 459 aa10.51□□□□□ -0.73
DHFR-202ENST00000504396 NOP56O00567 594 aaKnown RBP10.51□□□□□ -0.73
DHFR-202ENST00000504396 HOXA13P31271 388 aaPredicted RBP10.51□□□□□ -0.73
DHFR-202ENST00000504396 GPM6BQ13491 265 aa10.51□□□□□ -0.73
DHFR-202ENST00000504396 TRIM71Q2Q1W2 868 aaKnown RBP10.51□□□□□ -0.73
DHFR-202ENST00000504396 KCNV1Q6PIU1 500 aa10.51□□□□□ -0.73
DHFR-202ENST00000504396 SAMD3Q8N6K7 520 aa10.51□□□□□ -0.73
DHFR-202ENST00000504396 BANK1Q8NDB2 785 aa10.51□□□□□ -0.73
DHFR-202ENST00000504396 SAMD11Q96NU1 681 aa10.51□□□□□ -0.73
DHFR-202ENST00000504396 ZSCAN10Q96SZ4 725 aaPredicted RBP10.51□□□□□ -0.73
DHFR-202ENST00000504396 UBAC1Q9BSL1 405 aa10.51□□□□□ -0.73
DHFR-202ENST00000504396 AMNQ9BXJ7 453 aa10.51□□□□□ -0.73
DHFR-202ENST00000504396 IFIH1Q9BYX4 1025 aaKnown RBP10.51□□□□□ -0.73
DHFR-202ENST00000504396 FAM117AQ9C073 453 aa10.51□□□□□ -0.73
DHFR-202ENST00000504396 CLDND1Q9NY35 253 aa10.51□□□□□ -0.73
DHFR-202ENST00000504396 HAS3O00219 553 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 DCXO43602 365 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 QPCTQ16769 361 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 HSDL1Q3SXM5 330 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 TCEAL5Q5H9L2 206 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 CELF3Q5SZQ8 465 aaKnown RBP10.5□□□□□ -0.73
DHFR-202ENST00000504396 TRAF7Q6Q0C0 670 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 SERINC5Q86VE9 423 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 HOMER1Q86YM7 354 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 ANKS1AQ92625 1134 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 PDCD2LQ9BRP1 358 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 NSUN3Q9H649 340 aaKnown RBP10.5□□□□□ -0.73
DHFR-202ENST00000504396 JMJD4Q9H9V9 463 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 DIAPH3Q9NSV4 1193 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 BRWD1Q9NSI6 2320 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 H3BRB1 525 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 PPFIA4O75335 1185 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 CCNYL3P0C7X3 344 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 SMIM10L2AP0DMW4 78 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 SMIM10L2BP0DMW5 78 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 HOXD8P13378 290 aaPredicted RBP10.5□□□□□ -0.73
DHFR-202ENST00000504396 UBA1P22314 1058 aaKnown RBP10.5□□□□□ -0.73
DHFR-202ENST00000504396 CCND2P30279 289 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 CTNNB1P35222 781 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 CLK2P49760 499 aaKnown RBP10.5□□□□□ -0.73
DHFR-202ENST00000504396 HSD17B4P51659 736 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 HTRA4P83105 476 aaPredicted RBP10.5□□□□□ -0.73
DHFR-202ENST00000504396 GHRHRQ02643 423 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 TRAF1Q13077 416 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 HDAC1Q13547 482 aaPredicted RBP10.5□□□□□ -0.73
DHFR-202ENST00000504396 COL4A6Q14031 1691 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 PGM5Q15124 567 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 CLUL1Q15846 466 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 PTPRNQ16849 979 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 IMMTQ16891 758 aaKnown RBP10.5□□□□□ -0.73
DHFR-202ENST00000504396 PLEKHG4Q58EX7 1191 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 IFIT1BQ5T764 474 aaKnown RBP10.5□□□□□ -0.73
DHFR-202ENST00000504396 CWC27Q6UX04 472 aaKnown RBP10.5□□□□□ -0.73
DHFR-202ENST00000504396 FCHSD1Q86WN1 690 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 TMEM192Q8IY95 271 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 ENAHQ8N8S7 591 aaPredicted RBP10.5□□□□□ -0.73
DHFR-202ENST00000504396 LNPKQ9C0E8 428 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 TUT1Q9H6E5 874 aaKnown RBP10.5□□□□□ -0.73
DHFR-202ENST00000504396 PCDHA1Q9Y5I3 950 aa10.5□□□□□ -0.73
DHFR-202ENST00000504396 RALGAPA2Q2PPJ7 1873 aa10.49□□□□□ -0.73
DHFR-202ENST00000504396 H3BNC9 293 aa10.49□□□□□ -0.73
DHFR-202ENST00000504396 TREHO43280 583 aa10.49□□□□□ -0.73
DHFR-202ENST00000504396 LGALS2P05162 132 aa10.49□□□□□ -0.73
DHFR-202ENST00000504396 SDSP20132 328 aa10.49□□□□□ -0.73
DHFR-202ENST00000504396 MRE11P49959 708 aa10.49□□□□□ -0.73
DHFR-202ENST00000504396 SP4Q02446 784 aa10.49□□□□□ -0.73
DHFR-202ENST00000504396 AAMPQ13685 434 aa10.49□□□□□ -0.73
DHFR-202ENST00000504396 DESI1Q6ICB0 168 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms