RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 GDAP1Q8TB36 358 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 PBKQ96KB5 322 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 CALN1Q9BXU9 219 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 FAM49AQ9H0Q0 323 aaPredicted RBP7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 ZSWIM5Q9P217 1185 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 DAAM1Q9Y4D1 1078 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 PCDHA13Q9Y5I0 950 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 SRPRBQ9Y5M8 271 aaKnown RBP7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 TTI1O43156 1089 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 FTCDO95954 541 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 RFC1P35251 1148 aaPredicted RBP7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 PDE1CQ14123 709 aaPredicted RBP7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 KRT33BQ14525 404 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 RC3H1Q5TC82 1133 aaKnown RBP7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 BANK1Q8NDB2 785 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 DACT3Q96B18 629 aaPredicted RBP7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 ZBED2Q9BTP6 218 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 OLA1Q9NTK5 396 aaKnown RBP7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 PCDHA6Q9UN73 950 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 PCDHA8Q9Y5H6 950 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 ABCB11O95342 1321 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 PGRMC1O00264 195 aaKnown RBP7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 IKBKBO14920 756 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 PLEKHA8P1O95397 391 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 HOXA7P31268 230 aaPredicted RBP7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 TRIP13Q15645 432 aaPredicted RBP7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 GIMAP8Q8ND71 665 aaPredicted RBP7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 OR6B3Q8NGW1 331 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 PCDHB6Q9Y5E3 794 aa7.75□□□□□ -1.17
SYNPO2-205ENST00000504178 RPAP1Q9BWH6 1393 aaPredicted RBP7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 MMP10P09238 476 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 GNAT1P11488 350 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 MXI1P50539 228 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 PTPN12Q05209 780 aaKnown RBP7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 ADCY1Q08828 1119 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 CDO1Q16878 200 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 RWDD4Q6NW29 188 aaKnown RBP7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 SPDYE1Q8NFV5 336 aaPredicted RBP7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 RAVER2Q9HCJ3 691 aaKnown RBP7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 TLK1Q9UKI8 766 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 JRKLQ9Y4A0 524 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 ERBB3P21860 1342 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 USP17L5A8MUK1 530 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 ABCA8O94911 1581 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 SLFN14P0C7P3 912 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 PLS3P13797 630 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 CDR2Q01850 454 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 TNFAIP2Q03169 654 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 DPCR1Q3MIW9 517 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 ANKRD20A4Q4UJ75 823 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 ANKRD20A8PQ5CZ79 823 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 ANKRD20A2Q5SQ80 823 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 ANKRD20A1Q5TYW2 823 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 TDRD7Q8NHU6 1098 aaKnown RBP7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 PSPC1Q8WXF1 523 aaKnown RBP7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 GNGT2O14610 69 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 GH2P01242 217 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 PRELPP51888 382 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 PEX3P56589 373 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 FKBP3Q00688 224 aaKnown RBP7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 AP3B2Q13367 1082 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 SLC27A3Q5K4L6 730 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 TMTC3Q6ZXV5 915 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 OSBPL3Q9H4L5 887 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 EPB41L5Q9HCM4 733 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 MYO3BQ8WXR4 1341 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 SOWAHDA6NJG2 315 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 TOM1L1O75674 476 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 LDHAP00338 332 aaKnown RBP7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 ZNF18P17022 549 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 PSMA2P25787 234 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 MTMR1Q13613 665 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 CATSPER4Q7RTX7 472 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 COL15A1P39059 1388 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 NCAPD2Q15021 1401 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 F8W8V4 182 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 BNIP3LO60238 219 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 EIF4A3P38919 411 aaKnown RBP7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 STXBP2Q15833 593 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 ACRBPQ8NEB7 543 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 ALKBH8Q96BT7 664 aaKnown RBP7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 NUDCD1Q96RS6 583 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 BRIP1Q9BX63 1249 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 INTS9Q9NV88 658 aaKnown RBP7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 NEDD4P46934 1319 aa7.74□□□□□ -1.17
SYNPO2-205ENST00000504178 INPP1P49441 399 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 EPHB4P54760 987 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 PLTPP55058 493 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 KCTD16Q68DU8 428 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 SPOPLQ6IQ16 392 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 CYP4F22Q6NT55 531 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 PPP4R3CPQ6ZMV5 832 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 LINC00301Q8NCQ3 95 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 URGCPQ8TCY9 931 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 PDE11AQ9HCR9 933 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 ORC6Q9Y5N6 252 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 LRRD1A4D1F6 860 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 SFI1A8K8P3 1242 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 CDC25AP30304 524 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms