RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 IQCEQ6IPM2 695 aa6.4□□□□□ -1.38
UBE3D-205ENST00000503942 TRMT10BQ6PF06 316 aaKnown RBP6.4□□□□□ -1.38
UBE3D-205ENST00000503942 CEP68Q76N32 757 aa6.4□□□□□ -1.38
UBE3D-205ENST00000503942 TRMT2BQ96GJ1 504 aaKnown RBP6.4□□□□□ -1.38
UBE3D-205ENST00000503942 CCDC140Q96MF4 163 aa6.4□□□□□ -1.38
UBE3D-205ENST00000503942 SEC61A2Q9H9S3 476 aa6.4□□□□□ -1.38
UBE3D-205ENST00000503942 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.4□□□□□ -1.38
UBE3D-205ENST00000503942 WASF3Q9UPY6 502 aa6.4□□□□□ -1.38
UBE3D-205ENST00000503942 ZDHHC9Q9Y397 364 aa6.4□□□□□ -1.38
UBE3D-205ENST00000503942 CD2APQ9Y5K6 639 aa6.4□□□□□ -1.38
UBE3D-205ENST00000503942 BLACEA4D250 179 aa6.39□□□□□ -1.39
UBE3D-205ENST00000503942 HGSO14964 777 aaPredicted RBP6.39□□□□□ -1.39
UBE3D-205ENST00000503942 LRG1P02750 347 aa6.39□□□□□ -1.39
UBE3D-205ENST00000503942 COL6A1P12109 1028 aa6.39□□□□□ -1.39
UBE3D-205ENST00000503942 KCNJ6P48051 423 aa6.39□□□□□ -1.39
UBE3D-205ENST00000503942 GTF2A2P52657 109 aa6.39□□□□□ -1.39
UBE3D-205ENST00000503942 ABHD18Q0P651 414 aa6.39□□□□□ -1.39
UBE3D-205ENST00000503942 TCEA2Q15560 299 aa6.39□□□□□ -1.39
UBE3D-205ENST00000503942 C21orf62-AS1Q17RA5 79 aa6.39□□□□□ -1.39
UBE3D-205ENST00000503942 SYNPOQ8N3V7 929 aa6.39□□□□□ -1.39
UBE3D-205ENST00000503942 KCTD13Q8WZ19 329 aa6.39□□□□□ -1.39
UBE3D-205ENST00000503942 CHFRQ96EP1 664 aa6.39□□□□□ -1.39
UBE3D-205ENST00000503942 ZNF503Q96F45 646 aa6.39□□□□□ -1.39
UBE3D-205ENST00000503942 NCOA5Q9HCD5 579 aaKnown RBP6.39□□□□□ -1.39
UBE3D-205ENST00000503942 PCDHB4Q9Y5E5 795 aa6.39□□□□□ -1.39
UBE3D-205ENST00000503942 FOXS1O43638 330 aa6.38□□□□□ -1.39
UBE3D-205ENST00000503942 CPP00450 1065 aa6.38□□□□□ -1.39
UBE3D-205ENST00000503942 BCL6P41182 706 aa6.38□□□□□ -1.39
UBE3D-205ENST00000503942 GYS2P54840 703 aa6.38□□□□□ -1.39
UBE3D-205ENST00000503942 SUMO1P63165 101 aaKnown RBP6.38□□□□□ -1.39
UBE3D-205ENST00000503942 EMC4Q5J8M3 183 aa6.38□□□□□ -1.39
UBE3D-205ENST00000503942 E4F1Q66K89 784 aaPredicted RBP6.38□□□□□ -1.39
UBE3D-205ENST00000503942 IGFL4Q6B9Z1 124 aa6.38□□□□□ -1.39
UBE3D-205ENST00000503942 TCTN3Q6NUS6 607 aa6.38□□□□□ -1.39
UBE3D-205ENST00000503942 RALYLQ86SE5 291 aaKnown RBP6.38□□□□□ -1.39
UBE3D-205ENST00000503942 ZNF575Q86XF7 245 aa6.38□□□□□ -1.39
UBE3D-205ENST00000503942 CCDC103Q8IW40 242 aa6.38□□□□□ -1.39
UBE3D-205ENST00000503942 AMER2Q8N7J2 671 aa6.38□□□□□ -1.39
UBE3D-205ENST00000503942 TMEM169Q96HH4 297 aa6.38□□□□□ -1.39
UBE3D-205ENST00000503942 CLUHP3Q96NS8 147 aa6.38□□□□□ -1.39
UBE3D-205ENST00000503942 FEZ1Q99689 392 aa6.38□□□□□ -1.39
UBE3D-205ENST00000503942 TMEFF2Q9UIK5 374 aaPredicted RBP6.38□□□□□ -1.39
UBE3D-205ENST00000503942 COA3Q9Y2R0 106 aaPredicted RBP6.38□□□□□ -1.39
UBE3D-205ENST00000503942 PLD2O14939 933 aa6.37□□□□□ -1.39
UBE3D-205ENST00000503942 ZNF202O95125 648 aa6.37□□□□□ -1.39
UBE3D-205ENST00000503942 RAPGEF3O95398 923 aa6.37□□□□□ -1.39
UBE3D-205ENST00000503942 DALRD3Q5D0E6 543 aaKnown RBP6.37□□□□□ -1.39
UBE3D-205ENST00000503942 STEAP3Q658P3 488 aa6.37□□□□□ -1.39
UBE3D-205ENST00000503942 NUDT10Q8NFP7 164 aa6.37□□□□□ -1.39
UBE3D-205ENST00000503942 NUDT11Q96G61 164 aa6.37□□□□□ -1.39
UBE3D-205ENST00000503942 IPO9Q96P70 1041 aaKnown RBP6.37□□□□□ -1.39
UBE3D-205ENST00000503942 GNRHR2Q96P88 292 aa6.37□□□□□ -1.39
UBE3D-205ENST00000503942 FBXL7Q9UJT9 491 aa6.37□□□□□ -1.39
UBE3D-205ENST00000503942 ASXL2Q76L83 1435 aa6.36□□□□□ -1.39
UBE3D-205ENST00000503942 MYO1BO43795 1136 aa6.36□□□□□ -1.39
UBE3D-205ENST00000503942 TADA3O75528 432 aa6.36□□□□□ -1.39
UBE3D-205ENST00000503942 KLHL18O94889 574 aa6.36□□□□□ -1.39
UBE3D-205ENST00000503942 KCNAB2Q13303 367 aa6.36□□□□□ -1.39
UBE3D-205ENST00000503942 TESK1Q15569 626 aa6.36□□□□□ -1.39
UBE3D-205ENST00000503942 TRIM61Q5EBN2 209 aa6.36□□□□□ -1.39
UBE3D-205ENST00000503942 TMC5Q6UXY8 1006 aa6.36□□□□□ -1.39
UBE3D-205ENST00000503942 SLC7A14Q8TBB6 771 aa6.36□□□□□ -1.39
UBE3D-205ENST00000503942 DIO2Q92813 273 aa6.36□□□□□ -1.39
UBE3D-205ENST00000503942 ADOQ96SZ5 270 aa6.36□□□□□ -1.39
UBE3D-205ENST00000503942 MRPL4Q9BYD3 311 aaKnown RBP6.36□□□□□ -1.39
UBE3D-205ENST00000503942 HSPBP1Q9NZL4 362 aa6.36□□□□□ -1.39
UBE3D-205ENST00000503942 SLC4A7Q9Y6M7 1214 aa6.36□□□□□ -1.39
UBE3D-205ENST00000503942 KCNQ2O43526 872 aa6.35□□□□□ -1.39
UBE3D-205ENST00000503942 RFPL3O75679 317 aa6.35□□□□□ -1.39
UBE3D-205ENST00000503942 CLSTN1O94985 981 aa6.35□□□□□ -1.39
UBE3D-205ENST00000503942 DPTQ07507 201 aa6.35□□□□□ -1.39
UBE3D-205ENST00000503942 PABPC4Q13310 644 aaKnown RBP eCLIP6.35□□□□□ -1.39
UBE3D-205ENST00000503942 NRN1LQ496H8 165 aa6.35□□□□□ -1.39
UBE3D-205ENST00000503942 FNDC3BQ53EP0 1204 aaKnown RBP6.35□□□□□ -1.39
UBE3D-205ENST00000503942 ACBD5Q5T8D3 534 aaPredicted RBP6.35□□□□□ -1.39
UBE3D-205ENST00000503942 KCNT2Q6UVM3 1135 aa6.35□□□□□ -1.39
UBE3D-205ENST00000503942 Q6ZUG5 572 aa6.35□□□□□ -1.39
UBE3D-205ENST00000503942 USP53Q70EK8 1073 aa6.35□□□□□ -1.39
UBE3D-205ENST00000503942 PPIL6Q8IXY8 311 aa6.35□□□□□ -1.39
UBE3D-205ENST00000503942 GSTCDQ8NEC7 633 aa6.35□□□□□ -1.39
UBE3D-205ENST00000503942 LMF1Q96S06 567 aa6.35□□□□□ -1.39
UBE3D-205ENST00000503942 CEP89Q96ST8 783 aa6.35□□□□□ -1.39
UBE3D-205ENST00000503942 SLC52A2Q9HAB3 445 aa6.35□□□□□ -1.39
UBE3D-205ENST00000503942 NPFFR2Q9Y5X5 522 aa6.35□□□□□ -1.39
UBE3D-205ENST00000503942 ANKRD62A6NC57 917 aa6.34□□□□□ -1.39
UBE3D-205ENST00000503942 NARSO43776 548 aaKnown RBP6.34□□□□□ -1.39
UBE3D-205ENST00000503942 GABREP78334 506 aa6.34□□□□□ -1.39
UBE3D-205ENST00000503942 STYK1Q6J9G0 422 aa6.34□□□□□ -1.39
UBE3D-205ENST00000503942 EDAQ92838 391 aa6.34□□□□□ -1.39
UBE3D-205ENST00000503942 PTPRN2Q92932 1015 aa6.34□□□□□ -1.39
UBE3D-205ENST00000503942 NINJ1Q92982 152 aa6.34□□□□□ -1.39
UBE3D-205ENST00000503942 IKZF4Q9H2S9 585 aa6.34□□□□□ -1.39
UBE3D-205ENST00000503942 TRIM39Q9HCM9 518 aa6.34□□□□□ -1.39
UBE3D-205ENST00000503942 MYOTQ9UBF9 498 aa6.34□□□□□ -1.39
UBE3D-205ENST00000503942 ZFR2Q9UPR6 939 aaKnown RBP6.34□□□□□ -1.39
UBE3D-205ENST00000503942 TRAF6Q9Y4K3 522 aa6.34□□□□□ -1.39
UBE3D-205ENST00000503942 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.33□□□□□ -1.4
UBE3D-205ENST00000503942 H7BY64 318 aa6.33□□□□□ -1.4
UBE3D-205ENST00000503942 MSCO60682 206 aa6.33□□□□□ -1.4
UBE3D-205ENST00000503942 CHGBP05060 677 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms